Conservation of cofitness between CSW01_10535 and CSW01_01350 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.0 CSW01_01350 polysaccharide biosynthesis protein 0.74 19
Dickeya dianthicola ME23 0.49 DZA65_RS15420 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.77 DZA65_RS03625 polysaccharide biosynthesis protein low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS14485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.77 HGI48_RS03510 polysaccharide biosynthesis protein low > 71
Dickeya dadantii 3937 0.48 DDA3937_RS14515 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.77 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.49 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases low > 76
Pseudomonas sp. BP01 0.29 JOY50_RS16225 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.43 JOY50_RS16050 nucleoside-diphosphate sugar epimerase/dehydratase low > 84
Pseudomonas stutzeri RCH2 0.29 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.42 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases low > 67
Pseudomonas sp. DMC3 0.29 GFF4698 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.43 GFF4653 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.42 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas simiae WCS417 0.28 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.41 PS417_08190 membrane protein low > 88
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_02096 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.44 GEMAOFIL_01779 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 93
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.42 AO353_01970 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.42 AO356_03345 hypothetical protein low > 104
Pseudomonas aeruginosa PA14 0.28 IKLFDK_17740 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.43 IKLFDK_16005 nucleotide sugar epimerase/dehydratase WbpM low > 100
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.42 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas putida KT2440 0.28 PP_1751 methyltransferase/FAD-dependent oxidoreductase 0.42 PP_1805 Polysaccharide biosynthesis protein low > 96
Pseudomonas sp. RS175 0.28 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.42 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 88
Pseudomonas sp. SVBP6 0.28 COO64_RS06835 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.40 COO64_RS06660 nucleoside-diphosphate sugar epimerase/dehydratase low > 93
Pseudomonas sp. S08-1 0.27 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.45 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Pseudomonas segetis P6 0.27 MPMX49_02868 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.41 MPMX49_02884 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 75
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Marinobacter adhaerens HP15 0.24 HP15_1540 protein YfcK 0.47 HP15_2383 nucleotide sugar epimerase/dehydratase low > 73
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.28 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC low > 103
Paraburkholderia graminis OAS925 0.24 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.28 ABIE53_001163 FlaA1/EpsC-like NDP-sugar epimerase low > 113
Dechlorosoma suillum PS 0.24 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein 0.33 Dsui_0400 putative nucleoside-diphosphate sugar epimerase low > 51
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.40 ABZR87_RS08730 nucleoside-diphosphate sugar epimerase/dehydratase low > 80
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.30 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase low > 109
Shewanella oneidensis MR-1 0.22 SO3073 conserved hypothetical protein (NCBI ptt file) 0.49 SO3171 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Ralstonia solanacearum PSI07 0.22 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.35 RPSI07_RS04445 polysaccharide biosynthesis protein low > 81
Ralstonia solanacearum GMI1000 0.22 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.35 RS_RS21965 polysaccharide biosynthesis protein low > 80
Methylophilus sp. DMC18 0.22 GFF715 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.29 GFF568 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 43
Ralstonia solanacearum UW163 0.22 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.35 UW163_RS19975 polysaccharide biosynthesis protein — —
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.35 RALBFv3_RS19155 polysaccharide biosynthesis protein low > 76
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.29 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase low > 153
Acinetobacter radioresistens SK82 0.20 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.36 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 36
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.44 RR42_RS15825 capsular biosynthesis protein low > 128
Castellaniella sp019104865 MT123 0.16 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.27 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase low > 48
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS23825 hypothetical protein 0.40 HSERO_RS21110 dTDP-glucose 4,6-dehydratase low > 78
Variovorax sp. OAS795 0.15 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.36 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase low > 91
Acidovorax sp. GW101-3H11 0.15 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.27 Ac3H11_1539 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 79

Not shown: 34 genomes with orthologs for CSW01_10535 only; 24 genomes with orthologs for CSW01_01350 only