Conservation of cofitness between CSW01_14510 and CSW01_01285 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14510 oxidoreductase 1.0 CSW01_01285 perosamine synthetase 0.75 15
Rahnella sp. WP5 0.49 EX31_RS06850 oxidoreductase 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Enterobacter asburiae PDN3 0.49 EX28DRAFT_1619 Predicted dehydrogenases and related proteins 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Klebsiella michiganensis M5al 0.49 BWI76_RS16330 oxidoreductase 0.23 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1812 Uncharacterized oxidoreductase ydgJ (EC 1.-.-.-) 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Pantoea sp. MT58 0.48 IAI47_10370 oxidoreductase 0.25 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.48 PagCFBP13505_RS05760 oxidoreductase 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Escherichia coli ECOR38 0.47 HEPCGN_05955 ydgJ Uncharacterized oxidoreductase YdgJ 0.24 HEPCGN_03130 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA
Escherichia coli ECRC62 0.47 BNILDI_16880 ydgJ Uncharacterized oxidoreductase YdgJ 0.22 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli ECRC99 0.47 KEDOAH_00530 ydgJ Uncharacterized oxidoreductase YdgJ 0.54 KEDOAH_03720 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC100 0.47 OKFHMN_27575 ydgJ Uncharacterized oxidoreductase YdgJ 0.54 OKFHMN_24430 rfbE GDP-perosamine synthase RfbE/PerA low > 79
Escherichia coli ECRC98 0.47 JDDGAC_02165 ydgJ Uncharacterized oxidoreductase YdgJ 0.54 JDDGAC_28540 rfbE GDP-perosamine synthase RfbE/PerA low > 87
Escherichia coli ECRC101 0.47 MCAODC_17835 ydgJ Uncharacterized oxidoreductase YdgJ 0.54 MCAODC_20510 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_02102 putative oxidoreductase YdgJ 0.22 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 74
Escherichia coli BL21 0.47 ECD_01593 putative oxidoreductase 0.24 ECD_01942 VioA, involved in dTDP-N-acetylviosamine synthesis
Escherichia coli ECRC102 0.47 NIAGMN_00490 ydgJ Uncharacterized oxidoreductase YdgJ 0.54 NIAGMN_22375 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECOR27 0.47 NOLOHH_18090 ydgJ Uncharacterized oxidoreductase YdgJ 0.23 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_02014 putative oxidoreductase YdgJ 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Escherichia fergusonii Becca 0.47 EFB2_02368 putative oxidoreductase YdgJ 0.23 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli Nissle 1917 0.47 ECOLIN_RS09060 oxidoreductase 0.22 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Escherichia coli BW25113 0.47 b1624 b1624 orf, hypothetical protein (VIMSS) 0.22 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Klebsiella pneumoniae MKP103 0.46 KDGMDA_23275 oxidoreductase 0.24 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 95
Dickeya dadantii 3937 0.46 DDA3937_RS10615 oxidoreductase 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.41 15
Pectobacterium carotovorum WPP14 0.46 HER17_RS10790 oxidoreductase 0.24 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Erwinia amylovora T8 0.46 OLJFJH_14315 oxidoreductase 0.24 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 58
Dickeya dianthicola 67-19 0.46 HGI48_RS10615 oxidoreductase 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS11095 oxidoreductase 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Serratia liquefaciens MT49 0.43 IAI46_11530 oxidoreductase 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS29190 oxidoreductase 0.22 QEN71_RS29145 DegT/DnrJ/EryC1/StrS family aminotransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_02415 Predicted dehydrogenase 0.22 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase
Alteromonas macleodii MIT1002 0.40 MIT1002_03898 putative oxidoreductase YdgJ 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_1123 Predicted dehydrogenases and related proteins 0.24 Echvi_0062 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 79
Variovorax sp. SCN45 0.40 GFF1102 Uncharacterized oxidoreductase YdgJ 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 127
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.927.1 Nucleoside-diphosphate-sugar epimerases 0.22 Xcc-8004.2801.1 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 74
Paraburkholderia graminis OAS925 0.39 ABIE53_000234 scyllo-inositol 2-dehydrogenase (NADP+) 0.22 ABIE53_000145 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 113
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS19310 oxidoreductase 0.21 BPHYT_RS08930 aminotransferase DegT
Pseudomonas aeruginosa PA14 0.37 IKLFDK_27750 dehydrogenase 0.25 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 100
Variovorax sp. OAS795 0.36 ABID97_RS14645 oxidoreductase 0.24 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase low > 91
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS19630 oxidoreductase 0.36 ABZR87_RS22110 DegT/DnrJ/EryC1/StrS family aminotransferase low > 80
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS02445 oxidoreductase 0.19 A4249_RS13795 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS02150 Gfo/Idh/MocA family oxidoreductase 0.26 HMPREF1078_RS01585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 61
Cellulophaga baltica 18 0.34 M666_RS00210 Gfo/Idh/MocA family oxidoreductase 0.28 M666_RS12340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 67
Ralstonia solanacearum PSI07 0.33 RPSI07_RS04900 oxidoreductase 0.22 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0656 Predicted dehydrogenases and related proteins 0.20 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_05525 oxidoreductase 0.30 CA264_12460 aminotransferase DegT low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22425 oxidoreductase 0.35 CA265_RS01760 aminotransferase DegT low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS00280 Gfo/Idh/MocA family oxidoreductase 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 71
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_4282 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) 0.22 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3266 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3266 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_21375 oxidoreductase 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase low > 101
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_02657 scyllo-inositol 2-dehydrogenase (NADP(+)) IolW 0.21 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 93
Pseudomonas simiae WCS417 0.25 PS417_11880 oxidoreductase 0.21 PS417_27245 aminotransferase DegT low > 88
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_23195 oxidoreductase 0.22 AO356_03965 aminotransferase low > 104
Pseudomonas sp. RS175 0.24 PFR28_02419 scyllo-inositol 2-dehydrogenase (NADP(+)) IolW 0.23 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_519 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.16 52
Azospirillum brasilense Sp245 0.11 AZOBR_RS29845 oxidoreductase 0.21 AZOBR_RS33605 erythromycin biosynthesis sensory transduction protein eryC1 low > 97
Phaeobacter inhibens DSM 17395 0.10 PGA1_78p00130 putative oxidoreductase, GFO/IDH/MOCA family 0.22 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase
Magnetospirillum magneticum AMB-1 0.10 AMB_RS00635 gfo/Idh/MocA family oxidoreductase 0.28 AMB_RS00275 DegT/DnrJ/EryC1/StrS family aminotransferase

Not shown: 8 genomes with orthologs for CSW01_14510 only; 38 genomes with orthologs for CSW01_01285 only