| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_02835 | | RNA polymerase sigma factor RpoS | 1.0 | CSW01_01285 | | perosamine synthetase | 0.90 | 12 |
| Pantoea sp. MT58 | 0.71 | IAI47_04235 | | RNA polymerase sigma factor RpoS | 0.25 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.70 | MPMX20_03627 | | RNA polymerase sigma factor RpoS | 0.24 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 85 |
| Serratia liquefaciens MT49 | 0.70 | IAI46_03790 | | RNA polymerase sigma factor RpoS | 0.25 | IAI46_11015 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 86 |
| Escherichia coli BW25113 | 0.70 | b2741 | rpoS | RNA polymerase sigma factor (NCBI) | 0.22 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | low | > 76 |
| Escherichia coli ECRC101 | 0.70 | MCAODC_11020 | rpoS | RNA polymerase sigma factor RpoS | 0.54 | MCAODC_20510 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli BL21 | 0.70 | ECD_02591 | | RNA polymerase, sigma S (sigma 38) factor | 0.24 | ECD_01942 | | VioA, involved in dTDP-N-acetylviosamine synthesis | — | — |
| Escherichia coli ECOR38 | 0.70 | HEPCGN_19675 | rpoS | RNA polymerase sigma factor RpoS | 0.24 | HEPCGN_03130 | vioA | dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA | — | — |
| Escherichia coli ECRC62 | 0.70 | BNILDI_10860 | rpoS | RNA polymerase sigma factor RpoS | 0.22 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Escherichia coli ECRC98 | 0.70 | JDDGAC_24160 | rpoS | RNA polymerase sigma factor RpoS | 0.54 | JDDGAC_28540 | rfbE | GDP-perosamine synthase RfbE/PerA | low | > 86 |
| Escherichia fergusonii Becca | 0.70 | EFB2_01169 | | RNA polymerase sigma factor RpoS | 0.23 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 86 |
| Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_2837 | | RNA polymerase, sigma 38 subunit, RpoS | 0.24 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | low | > 76 |
| Erwinia amylovora T8 | 0.70 | OLJFJH_09380 | | RNA polymerase sigma factor RpoS | 0.24 | OLJFJH_17365 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 58 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.70 | OHPLBJKB_00992 | | RNA polymerase sigma factor RpoS | 0.22 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 73 |
| Escherichia coli ECRC102 | 0.70 | NIAGMN_18265 | rpoS | RNA polymerase sigma factor RpoS | 0.54 | NIAGMN_22375 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECOR27 | 0.70 | NOLOHH_12310 | rpoS | RNA polymerase sigma factor RpoS | 0.23 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Klebsiella michiganensis M5al | 0.70 | BWI76_RS22645 | | RNA polymerase sigma factor RpoS | 0.23 | BWI76_RS26485 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 92 |
| Rahnella sp. WP5 | 0.70 | EX31_RS07825 | | RNA polymerase sigma factor RpoS | 0.24 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 89 |
| Escherichia coli ECRC100 | 0.70 | OKFHMN_20495 | rpoS | RNA polymerase sigma factor RpoS | 0.54 | OKFHMN_24430 | rfbE | GDP-perosamine synthase RfbE/PerA | low | > 80 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.70 | GFF4788 | | RNA polymerase sigma factor RpoS | 0.25 | GFF1858 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) | low | > 78 |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_00625 | | RNA polymerase sigma factor RpoS | 0.22 | MIT1002_01078 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | low | > 70 |
| Erwinia tracheiphila SCR3 | 0.69 | LU632_RS06480 | rpoS | RNA polymerase sigma factor RpoS | 0.24 | LU632_RS16495 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS16875 | | RNA polymerase sigma factor RpoS | 0.26 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | — | — |
| Dickeya dianthicola ME23 | 0.68 | DZA65_RS18020 | | RNA polymerase sigma factor RpoS | 0.25 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS04350 | | RNA polymerase sigma factor RpoS | 0.24 | HER17_RS06520 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Shewanella loihica PV-4 | 0.68 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | 0.20 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | low | > 60 |
| Dickeya dianthicola 67-19 | 0.68 | HGI48_RS16945 | | RNA polymerase sigma factor RpoS | 0.26 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 71 |
| Shewanella amazonensis SB2B | 0.68 | Sama_1044 | | RNA polymerase sigma-38 factor (RefSeq) | 0.27 | Sama_2329 | | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.66 | Shewana3_1124 | | RNA polymerase, sigma 38 subunit, RpoS (RefSeq) | 0.23 | Shewana3_1303 | | polysaccharide biosynthesis protein (RefSeq) | low | > 73 |
| Pseudomonas sp. BP01 | 0.63 | JOY50_RS23755 | rpoS | RNA polymerase sigma factor RpoS | 0.22 | JOY50_RS13135 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.63 | COO64_RS19795 | rpoS | RNA polymerase sigma factor RpoS | 0.22 | COO64_RS21480 | vioA | dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.63 | AO353_16615 | | RNA polymerase sigma factor RpoS | 0.25 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | low | > 101 |
| Pseudomonas sp. DMC3 | 0.62 | GFF2084 | | RNA polymerase sigma factor RpoS | 0.21 | GFF2433 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 89 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00427 | | RNA polymerase sigma factor RpoS | 0.23 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_05885 | | RNA polymerase sigma factor RpoS | 0.22 | AO356_03965 | | aminotransferase | low | > 104 |
| Marinobacter adhaerens HP15 | 0.62 | HP15_1283 | | RNA polymerase, sigma 70 subunit, RpoD family | 0.23 | HP15_2398 | | aminotransferase, DegT/DnrJ/EryC1/StrS family | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_3037 | | RNA polymerase sigma factor RpoS | 0.23 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_4674 | | RNA polymerase sigma factor RpoS | 0.37 | PfGW456L13_4375 | | perosamine synthetase | low | > 87 |
| Pseudomonas simiae WCS417 | 0.62 | PS417_06365 | | RNA polymerase sigma factor | 0.21 | PS417_27245 | | aminotransferase DegT | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | 0.23 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | 0.23 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_3115 | | RNA polymerase sigma factor RpoS | 0.22 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.62 | IKLFDK_18495 | | RNA polymerase sigma factor RpoS | 0.25 | IKLFDK_18130 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_2806 | | RNA polymerase sigma factor RpoS | 0.22 | Psest_1811 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | — | — |
| Dechlorosoma suillum PS | 0.44 | Dsui_1971 | | RNA polymerase sigma factor RpoS | 0.23 | Dsui_1769 | | putative PLP-dependent enzyme possibly involved in cell wall biogenesis | low | > 51 |
| Herbaspirillum seropedicae SmR1 | 0.44 | HSERO_RS14830 | | RNA polymerase sigma factor RpoS | 0.27 | HSERO_RS21000 | | aminotransferase DegT | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_00844 | | RNA polymerase, sigma 38 subunit, RpoS | 0.22 | H281DRAFT_00805 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS22240 | | RNA polymerase sigma factor RpoS | 0.22 | QEN71_RS29145 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.38 | BPHYT_RS09115 | | RNA polymerase sigma factor RpoS | 0.21 | BPHYT_RS08930 | | aminotransferase DegT | — | — |
| Paraburkholderia graminis OAS925 | 0.38 | ABIE53_002057 | | RNA polymerase nonessential primary-like sigma factor | 0.22 | ABIE53_000145 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 113 |
| Variovorax sp. SCN45 | 0.34 | GFF2842 | | RNA polymerase sigma factor RpoS | 0.22 | GFF6876 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | low | > 127 |
Not shown: 5 genomes with orthologs for CSW01_02835 only; 41 genomes with orthologs for CSW01_01285 only