| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_09970 | | peptide-methionine (R)-S-oxide reductase | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.85 | 17 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.54 | GFF3479 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_1772 | | methionine-R-sulfoxide reductase | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_01845 | | Peptide methionine sulfoxide reductase MsrB | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | low | > 85 |
| Pseudomonas aeruginosa PA14 | 0.53 | IKLFDK_14360 | | Peptide methionine sulfoxide reductase MsrB | 0.39 | IKLFDK_26150 | | GDP-mannose 4 6-dehydratase | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.53 | DY961_RS02860 | msrB;go_function=peptide-methionine | peptide-methionine (R)-S-oxide reductase MsrB | 0.39 | DY961_RS25555 | gmd;go_function=GDP-mannose | GDP-mannose 4 6-dehydratase | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.53 | DQ20_RS32735 | msrB;go_function=peptide-methionine | peptide-methionine (R)-S-oxide reductase MsrB | 0.39 | DQ20_RS58005 | gmd;go_function=GDP-mannose | GDP-mannose 4 6-dehydratase | low | > 101 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_01954 | | Peptide methionine sulfoxide reductase MsrB | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_1773 | | methionine-R-sulfoxide reductase | 0.83 | Psest_1818 | | GDP-mannose 4,6-dehydratase | low | > 67 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_05125 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Escherichia coli BL21 | 0.52 | ECD_01747 | | methionine sulfoxide reductase B | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | low | > 61 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_16050 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_01375 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS09915 | | peptide-methionine (R)-S-oxide reductase MsrB | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_17265 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Escherichia coli BW25113 | 0.52 | b1778 | yeaA | methionine sulfoxide reductase B (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_01330 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC100 | 0.52 | OKFHMN_26735 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_01310 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_02216 | | Peptide methionine sulfoxide reductase MsrB | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_18675 | msrB | Peptide methionine sulfoxide reductase MsrB | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_260 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_2445 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_19155 | | peptide methionine sulfoxide reductase | 0.42 | AO353_10245 | | GDP-mannose 4,6-dehydratase | low | > 101 |
| Pseudomonas sp. DMC3 | 0.50 | GFF4595 | | Peptide methionine sulfoxide reductase MsrB | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_2253 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | 0.40 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_03085 | | peptide methionine sulfoxide reductase | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS08515 | | peptide-methionine (R)-S-oxide reductase MsrB | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS08515 | | peptide-methionine (R)-S-oxide reductase MsrB | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.49 | COO64_RS05975 | msrB | peptide-methionine (R)-S-oxide reductase MsrB | 0.45 | COO64_RS06615 | gmd | GDP-mannose 4,6-dehydratase | low | > 93 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_3614 | | Protein of unknown function DUF25 | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_22580 | | Peptide-methionine (R)-S-oxide reductase MsrB | 0.40 | OH686_11980 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_3614 | | Protein of unknown function DUF25 | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_00985 | | Peptide methionine sulfoxide reductase MsrB | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Pseudomonas lactucae CFBP13502 | 0.49 | GEMAOFIL_01845 | | Peptide methionine sulfoxide reductase MsrB | 0.46 | GEMAOFIL_04278 | | GDP-mannose 4,6-dehydratase | low | > 96 |
| Synechococcus elongatus PCC 7942 | 0.49 | Synpcc7942_2190 | msrB | Methionine sulfoxide reductase B | 0.71 | Synpcc7942_1342 | gmd | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas putida KT2440 | 0.48 | PP_1873 | | Peptide methionine sulfoxide reductase MsrB | 0.46 | PP_1799 | | GDP-mannose 4,6-dehydratase | low | > 96 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS16290 | | peptide-methionine (R)-S-oxide reductase | 0.47 | RPSI07_RS19840 | | GDP-mannose 4,6-dehydratase | low | > 81 |
| Sphingobium sp. HT1-2 | 0.47 | GFF4143 | | Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) | 0.11 | GFF4227 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 95 |
| Castellaniella sp019104865 MT123 | 0.46 | ABCV34_RS08520 | | peptide-methionine (R)-S-oxide reductase MsrB | 0.71 | ABCV34_RS12935 | | GDP-mannose 4,6-dehydratase | — | — |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS09545 | | peptide methionine sulfoxide reductase | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_002148 | | peptide-methionine (R)-S-oxide reductase | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_00913 | | peptide-methionine (R)-S-oxide reductase | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS11165 | | methionine sulfoxide reductase B | 0.76 | RR42_RS33235 | | GDP-mannose 4,6-dehydratase | low | > 128 |
| Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS20830 | | peptide-methionine (R)-S-oxide reductase | 0.63 | AMB_RS05505 | | GDP-mannose 4,6-dehydratase | low | > 64 |
| Variovorax sp. SCN45 | 0.44 | GFF1329 | | Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) | 0.74 | GFF61 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 127 |
| Rhodopseudomonas palustris CGA009 | 0.44 | TX73_021075 | | peptide-methionine (R)-S-oxide reductase MsrB | 0.45 | TX73_020470 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS15695 | | peptide-methionine (R)-S-oxide reductase MsrB | 0.44 | ABID97_RS05705 | | GDP-mannose 4,6-dehydratase | low | > 91 |
| Caulobacter crescentus NA1000 | 0.42 | CCNA_02265 | | peptide methionine sulfoxide reductase msrB | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.42 | CCNA_02265 | | peptide methionine sulfoxide reductase msrB | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 67 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.41 | Xcc-8004.4624.1 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | 0.46 | Xcc-8004.4503.1 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 74 |
| Mycobacterium tuberculosis H37Rv | 0.38 | Rv2674 | | Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase) | 0.48 | Rv1511 | | GDP-D-mannose dehydratase GmdA (GDP-mannose 4,6 dehydratase) (GMD) | low | > 58 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.32 | CA265_RS15535 | | methionine sulfoxide reductase B | 0.70 | CA265_RS19210 | | GDP-mannose 4,6-dehydratase | — | — |
Not shown: 13 genomes with orthologs for CSW01_09970 only; 37 genomes with orthologs for CSW01_01280 only