Conservation of cofitness between CSW01_01245 and CSW01_01265 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01245 lipopolysaccharide heptosyltransferase II 1.0 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase 0.98 15
Pseudomonas sp. BP01 0.54 JOY50_RS17820 waaF lipopolysaccharide heptosyltransferase II 0.45 JOY50_RS12210 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Pseudomonas sp. SVBP6 0.54 COO64_RS22830 waaF lipopolysaccharide heptosyltransferase II 0.44 COO64_RS00370 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Pseudomonas aeruginosa PA14 0.51 IKLFDK_28475 heptosyltransferase I 0.44 IKLFDK_17110 ADP-glyceromanno-heptose 6-epimerase — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF 0.71 HER17_RS20770 ADP-glyceromanno-heptose 6-epimerase 0.92 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) 0.72 GFF392 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) 0.96 2
Rahnella sp. WP5 0.50 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF 0.71 EX31_RS14395 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC102 0.50 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 NIAGMN_13460 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BL21 0.50 ECD_03477 ADP-heptose:LPS heptosyltransferase II 0.73 ECD_03476 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding — —
Escherichia coli ECRC100 0.50 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 OKFHMN_15700 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC99 0.50 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 KEDOAH_12450 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dadantii 3937 0.50 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF 0.71 DDA3937_RS20440 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC101 0.50 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 MCAODC_06210 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC98 0.50 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 JDDGAC_19325 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 0.73 OHPLBJKB_00081 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Enterobacter asburiae PDN3 0.50 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II 0.72 EX28DRAFT_3871 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia fergusonii Becca 0.50 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 0.73 EFB2_00192 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECOR38 0.50 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC62 0.50 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 BNILDI_03930 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF 0.73 ECOLIN_RS20645 ADP-glyceromanno-heptose 6-epimerase 0.85 3
Escherichia coli ECOR27 0.50 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.73 NOLOHH_07580 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BW25113 0.50 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) 0.73 b3619 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) 0.88 4
Dickeya dianthicola 67-19 0.49 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF 0.70 HGI48_RS00770 ADP-glyceromanno-heptose 6-epimerase — —
Serratia liquefaciens MT49 0.49 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF 0.73 IAI46_24735 ADP-glyceromanno-heptose 6-epimerase — —
Klebsiella michiganensis M5al 0.49 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II 0.72 BWI76_RS27260 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Methylophilus sp. DMC18 0.49 GFF294 ADP-heptose--LPS heptosyltransferase 2 0.33 GFF297 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Dickeya dianthicola ME23 0.49 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF 0.70 DZA65_RS00825 ADP-glyceromanno-heptose 6-epimerase — —
Erwinia amylovora T8 0.49 OLJFJH_05880 ADP-heptose--LPS heptosyltransferase RfaF 0.70 OLJFJH_05885 ADP-glyceromanno-heptose 6-epimerase — —
Enterobacter sp. TBS_079 0.49 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 0.72 MPMX20_00114 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Pantoea agglomerans CFBP13505 P0401 0.48 PagCFBP13505_RS18660 ADP-heptose--LPS heptosyltransferase RfaF 0.70 PagCFBP13505_RS18655 ADP-glyceromanno-heptose 6-epimerase — —
Erwinia tracheiphila SCR3 0.48 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.70 LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Erwinia tracheiphila HP pepo 2.2 0.48 IJEDHG_07865 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.70 IJEDHG_07870 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Pantoea sp. MT58 0.48 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF 0.69 IAI47_00690 ADP-glyceromanno-heptose 6-epimerase — —
Klebsiella pneumoniae MKP103 0.45 KDGMDA_07950 ADP-heptose--LPS heptosyltransferase RfaF 0.72 KDGMDA_07945 ADP-glyceromanno-heptose 6-epimerase — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS03165 ADP-heptose--LPS heptosyltransferase 0.46 RR42_RS04520 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Dechlorosoma suillum PS 0.39 Dsui_3341 lipopolysaccharide heptosyltransferase II 0.52 Dsui_1953 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS08040 lipopolysaccharide heptosyltransferase II 0.49 ABZR87_RS09505 ADP-glyceromanno-heptose 6-epimerase 0.83 4
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS16295 ADP-heptose--LPS heptosyltransferase 0.48 BPHYT_RS14855 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS02400 lipopolysaccharide heptosyltransferase II 0.49 QEN71_RS04125 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum GMI1000 0.38 RS_RS02830 lipopolysaccharide heptosyltransferase II 0.48 RS_RS04550 ADP-L-glycero-D-mannoheptose-6-epimerase 0.76 2
Ralstonia solanacearum UW163 0.38 UW163_RS01465 lipopolysaccharide heptosyltransferase II 0.48 UW163_RS15995 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS12145 lipopolysaccharide heptosyltransferase II 0.48 RALBFv3_RS13815 ADP-glyceromanno-heptose 6-epimerase 0.75 1
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04195 heptosyltransferase-2 0.48 H281DRAFT_03913 ADP-glyceromanno-heptose 6-epimerase precursor — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS21185 lipopolysaccharide heptosyltransferase II 0.48 RPSI07_RS19655 ADP-glyceromanno-heptose 6-epimerase — —
Paraburkholderia graminis OAS925 0.37 ABIE53_003434 heptosyltransferase-2 0.48 ABIE53_003146 ADP-L-glycero-D-manno-heptose 6-epimerase 0.68 4
Xanthobacter sp. DMC5 0.32 GFF367 ADP-heptose--LPS heptosyltransferase 2 0.30 GFF369 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Rhodopseudomonas palustris CGA009 0.27 TX73_020655 lipopolysaccharide heptosyltransferase II 0.32 TX73_020650 ADP-glyceromanno-heptose 6-epimerase — —
Fusobacterium nucleatum SB010 0.13 HUW76_07360 glycosyltransferase family 9 protein 0.35 HUW76_01300 ADP-glyceromanno-heptose 6-epimerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.13 CA264_20400 heptosyltransferase 0.29 CA264_01380 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Magnetospirillum magneticum AMB-1 0.12 AMB_RS02720 glycosyltransferase family 9 protein 0.30 AMB_RS03075 ADP-glyceromanno-heptose 6-epimerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.11 DVU1055 heptosyltransferase family protein (TIGR) 0.36 DVU0481 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.11 DvMF_3136 lipopolysaccharide heptosyltransferase II (RefSeq) 0.37 DvMF_1734 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) — —
Rhodospirillum rubrum S1H 0.10 Rru_A2230 Glycosyl transferase, family 9 (NCBI) 0.31 Rru_A3278 ADP-L-glycero-D-manno-heptose-6-epimerase (NCBI) — —
Azospirillum sp. SherDot2 0.09 MPMX19_04967 ADP-heptose--LPS heptosyltransferase 2 0.34 MPMX19_01823 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Azospirillum brasilense Sp245 0.08 AZOBR_RS06275 heptosyltransferase 0.33 AZOBR_RS31160 ADP-L-glycero-D-manno-heptose-6-epimerase — —

Not shown: 20 genomes with orthologs for CSW01_01245 only; 6 genomes with orthologs for CSW01_01265 only