Conservation of cofitness between CSW01_10815 and CSW01_00330 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10815 Cys-tRNA(Pro) deacylase 1.0 CSW01_00330 fluoride efflux transporter CrcB 0.46 11
Pectobacterium carotovorum WPP14 0.57 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.24 HER17_RS15285 fluoride efflux transporter CrcB low > 75
Escherichia coli Nissle 1917 0.56 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 ECOLIN_RS03405 fluoride efflux transporter CrcB — —
Escherichia fergusonii Becca 0.56 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 EFB2_03467 Putative fluoride ion transporter CrcB low > 86
Escherichia coli BW25113 0.55 b0481 ybaK hypothetical protein (NCBI) 0.26 b0624 crcB camphor resistance protein CrcB (NCBI) low > 76
Escherichia coli BL21 0.55 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 0.25 ECD_00594 fluoride efflux channel, dual topology membrane protein low > 61
Escherichia coli ECOR38 0.55 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.26 HEPCGN_00860 crcB fluoride efflux transporter CrcB low > 88
Escherichia coli ECOR27 0.55 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 NOLOHH_23790 crcB fluoride efflux transporter CrcB low > 76
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS10790 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.20 PagCFBP13505_RS20765 fluoride efflux transporter CrcB low > 74
Escherichia coli ECRC62 0.55 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 BNILDI_21800 crcB fluoride efflux transporter CrcB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 OHPLBJKB_03081 Putative fluoride ion transporter CrcB low > 74
Rahnella sp. WP5 0.55 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.26 EX31_RS23045 fluoride efflux transporter CrcB low > 89
Serratia liquefaciens MT49 0.55 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.26 IAI46_05885 fluoride efflux transporter CrcB low > 87
Pseudomonas stutzeri RCH2 0.55 Psest_1454 ybaK/ebsC protein 0.23 Psest_2035 crcB protein low > 67
Escherichia coli ECRC102 0.55 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 NIAGMN_05470 crcB fluoride efflux transporter CrcB low > 80
Escherichia coli ECRC100 0.55 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 OKFHMN_07415 crcB fluoride efflux transporter CrcB low > 79
Escherichia coli ECRC98 0.55 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 JDDGAC_11060 crcB fluoride efflux transporter CrcB low > 87
Escherichia coli ECRC101 0.55 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 MCAODC_26630 crcB fluoride efflux transporter CrcB low > 87
Escherichia coli ECRC99 0.55 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 KEDOAH_20555 crcB fluoride efflux transporter CrcB — —
Pantoea sp. MT58 0.54 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.21 IAI47_01170 fluoride efflux transporter CrcB low > 76
Erwinia amylovora T8 0.54 OLJFJH_17720 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.22 OLJFJH_18395 fluoride efflux transporter CrcB low > 58
Enterobacter sp. TBS_079 0.54 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.24 MPMX20_01284 Putative fluoride ion transporter CrcB low > 85
Klebsiella pneumoniae MKP103 0.54 KDGMDA_14930 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.23 KDGMDA_16345 fluoride efflux transporter CrcB low > 95
Klebsiella michiganensis M5al 0.54 BWI76_RS06870 aminoacyl-tRNA deacylase 0.23 BWI76_RS07985 fluoride ion transporter CrcB low > 92
Pseudomonas sp. DMC3 0.53 GFF5105 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.21 GFF1533 Putative fluoride ion transporter CrcB low > 89
Pseudomonas putida KT2440 0.53 PP_1077 Cys-tRNAPro deacylase 0.25 PP_4001 Putative fluoride ion transporter CrcB low > 96
Pseudomonas sp. BP01 0.53 JOY50_RS14880 ybaK Cys-tRNA(Pro) deacylase 0.25 JOY50_RS06520 crcB fluoride efflux transporter CrcB low > 84
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase 0.24 EX28DRAFT_2338 protein CrcB low > 76
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_1736 Cys-tRNA(Pro) deacylase YbaK 0.21 PfGW456L13_2654 CrcB protein low > 87
Erwinia tracheiphila SCR3 0.51 LU632_RS15310 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 LU632_RS01320 crcB fluoride efflux transporter CrcB low > 73
Erwinia tracheiphila HP pepo 2.2 0.50 IJEDHG_01120 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.25 IJEDHG_26360 crcB fluoride efflux transporter CrcB low > 61
Dickeya dadantii 3937 0.50 DDA3937_RS05835 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.24 DDA3937_RS06125 fluoride efflux transporter CrcB low > 74
Shewanella oneidensis MR-1 0.50 SO1124 conserved hypothetical protein TIGR00011 (NCBI ptt file) 0.41 SO2309 crcB crcB protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.50 Shewana3_0957 ybaK/ebsC protein (RefSeq) 0.41 Shewana3_2053 camphor resistance protein CrcB (RefSeq) — —
Alteromonas macleodii MIT1002 0.49 MIT1002_01641 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.43 MIT1002_02177 camphor resistance protein CrcB low > 70
Shewanella amazonensis SB2B 0.49 Sama_0531 YbaK/EbsC protein (RefSeq) 0.45 Sama_1775 crcB protein (RefSeq) low > 62
Dickeya dianthicola 67-19 0.43 HGI48_RS05880 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.24 HGI48_RS06170 fluoride efflux transporter CrcB low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS06215 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.24 DZA65_RS06515 fluoride efflux transporter CrcB low > 75
Shewanella loihica PV-4 0.42 Shew_0016 ybaK/ebsC protein (RefSeq) 0.43 Shew_2021 CrcB protein (RefSeq) — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS00470 hypothetical protein 0.23 AZOBR_RS06900 camphor resistance protein CrcB low > 97
Azospirillum sp. SherDot2 0.41 MPMX19_02507 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.24 MPMX19_01719 Putative fluoride ion transporter CrcB low > 112
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01014 cysteinyl-tRNA(Pro) deacylase 0.32 CCNA_02060 CrcB family protein low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01014 cysteinyl-tRNA(Pro) deacylase 0.32 CCNA_02060 CrcB family protein low > 66
Rhizobium sp. OAE497 0.35 ABIE40_RS01230 Cys-tRNA(Pro) deacylase 0.27 ABIE40_RS09920 fluoride efflux transporter CrcB low > 107
Rhodospirillum rubrum S1H 0.35 Rru_A3668 hypothetical protein (NCBI) 0.28 Rru_A0236 Camphor resistance CrcB protein (NCBI) low > 58
Sinorhizobium meliloti 1021 0.34 SMc00385 hypothetical protein 0.23 SMc01274 camphor resistance protein CrcB low > 103
Bacteroides ovatus ATCC 8483 0.34 BACOVA_03702 YbaK/EbsC protein 0.21 BACOVA_05372 protein CrcB low > 96
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0579 putative transcription regulator (NCBI ptt file) 0.25 BT4574 conserved hypothetical protein (NCBI ptt file) — —
Agrobacterium fabrum C58 0.32 Atu0275 hypothetical protein 0.29 Atu1470 Camphor resistance protein — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS00065 Cys-tRNA(Pro) deacylase 0.26 AMB_RS17225 fluoride efflux transporter CrcB — —
Bifidobacterium breve UCC2003 0.31 BBR_RS16795 Cys-tRNA(Pro) deacylase 0.22 BBR_RS13525 CrcB family protein low > 34
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS11465 Cys-tRNA(Pro) deacylase 0.20 A4249_RS07870 fluoride efflux transporter CrcB low > 48
Bacteroides stercoris CC31F 0.31 HMPREF1181_RS15180 Cys-tRNA(Pro) deacylase 0.21 HMPREF1181_RS13275 fluoride efflux transporter CrcB low > 56
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS02420 Cys-tRNA(Pro) deacylase 0.20 HMPREF1078_RS18740 fluoride efflux transporter CrcB low > 61
Rhodopseudomonas palustris CGA009 0.29 TX73_022270 Cys-tRNA(Pro) deacylase 0.23 TX73_008715 fluoride efflux transporter CrcB low > 86
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS02765 Cys-tRNA(Pro) deacylase 0.22 QEN71_RS23260 fluoride efflux transporter CrcB low > 153
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS04270 membrane protein 0.25 HSERO_RS10540 camphor resistance protein CrcB low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF288 Transcriptional regulator 0.24 GFF5356 Protein crcB homolog — —

Not shown: 40 genomes with orthologs for CSW01_10815 only; 9 genomes with orthologs for CSW01_00330 only