Conservation of cofitness between BPHYT_RS30235 and BPHYT_RS33780 in Burkholderia phytofirmans PsJN

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS30235 tartrate dehydrogenase 1.0 BPHYT_RS33780 glycogen branching protein 0.26 3
Paraburkholderia graminis OAS925 0.98 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.94 ABIE53_004826 1,4-alpha-glucan branching enzyme low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.94 H281DRAFT_06050 1,4-alpha-glucan branching enzyme low > 103
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS32005 tartrate dehydrogenase 0.84 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB low > 153
Ralstonia solanacearum PSI07 0.80 RPSI07_RS07555 tartrate dehydrogenase 0.61 RPSI07_RS00885 1,4-alpha-glucan branching protein GlgB low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS24845 tartrate dehydrogenase 0.61 RS_RS18305 glycogen-branching enzyme low > 80
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS21505 tartrate dehydrogenase 0.62 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB low > 80
Serratia liquefaciens MT49 0.76 IAI46_21025 tartrate dehydrogenase 0.52 IAI46_23940 1,4-alpha-glucan branching protein GlgB low > 86
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_28225 tartrate dehydrogenase 0.60 AO353_22945 glycogen branching protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.59 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Variovorax sp. OAS795 0.75 ABID97_RS25885 tartrate dehydrogenase 0.52 ABID97_RS04550 1,4-alpha-glucan branching protein GlgB low > 91
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07390 tartrate dehydrogenase 0.59 HSERO_RS12510 glycogen branching protein low > 78
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_26735 tartrate dehydrogenase 0.60 AO356_01245 glycogen branching protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.60 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 103
Klebsiella michiganensis M5al 0.74 BWI76_RS10680 tartrate dehydrogenase 0.52 BWI76_RS26215 glycogen-branching enzyme low > 92
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_2396 Tartrate dehydrogenase 0.59 Psyr_2491 glycogen branching enzyme low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_2396 Tartrate dehydrogenase 0.59 Psyr_2491 glycogen branching enzyme low > 86
Escherichia coli ECOR38 0.73 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.53 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme low > 87
Escherichia coli ECOR27 0.73 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.52 NOLOHH_08675 glgB 1,4-alpha-glucan branching enzyme low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.53 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB low > 73
Pseudomonas fluorescens SBW25 0.72 PFLU_RS19735 tartrate dehydrogenase 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Escherichia coli ECRC102 0.72 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.53 NIAGMN_14655 glgB 1,4-alpha-glucan branching enzyme
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS19735 tartrate dehydrogenase 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Escherichia coli ECRC101 0.72 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.53 MCAODC_07415 glgB 1,4-alpha-glucan branching enzyme low > 87
Escherichia coli ECRC99 0.72 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.53 KEDOAH_11255 glgB 1,4-alpha-glucan branching enzyme
Escherichia coli ECRC62 0.72 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.53 BNILDI_02840 glgB 1,4-alpha-glucan branching enzyme low > 75
Escherichia coli ECRC98 0.72 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.52 JDDGAC_20515 glgB 1,4-alpha-glucan branching enzyme low > 86
Escherichia coli ECRC100 0.72 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.53 OKFHMN_16885 glgB 1,4-alpha-glucan branching enzyme low > 80
Escherichia coli BW25113 0.72 b1800 yeaU predicted dehydrogenase (NCBI) 0.53 b3432 glgB glycogen branching enzyme (NCBI) low > 76
Escherichia coli BL21 0.72 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.53 ECD_03284 1,4-alpha-glucan branching enzyme low > 61
Rhodopseudomonas palustris CGA009 0.67 TX73_008960 tartrate dehydrogenase 0.50 TX73_018885 1,4-alpha-glucan branching protein GlgB
Variovorax sp. SCN45 0.66 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.51 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 127
Bosea sp. OAE506 0.66 ABIE41_RS22540 tartrate dehydrogenase 0.54 ABIE41_RS01220 1,4-alpha-glucan branching protein GlgB low > 77
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.50 DDA3937_RS19745 1,4-alpha-glucan branching protein GlgB low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.52 DZA65_RS20930 1,4-alpha-glucan branching protein GlgB low > 75
Pantoea sp. MT58 0.65 IAI47_17525 tartrate dehydrogenase 0.53 IAI47_01680 1,4-alpha-glucan branching enzyme low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.52 HGI48_RS19855 1,4-alpha-glucan branching protein GlgB low > 71
Marinobacter adhaerens HP15 0.38 HP15_817 3-isopropylmalate dehydrogenase 0.43 HP15_1712 glycogen branching enzyme low > 73
Mycobacterium tuberculosis H37Rv 0.33 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 0.43 Rv1326c 1,4-alpha-glucan branching enzyme GlgB (glycogen branching enzyme)
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.58 Xcc-8004.186.1 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Shewanella loihica PV-4 0.30 Shew_2760 isocitrate dehydrogenase (RefSeq) 0.48 Shew_1168 glycogen branching enzyme (RefSeq)
Shewanella sp. ANA-3 0.30 Shewana3_2890 isocitrate dehydrogenase (RefSeq) 0.48 Shewana3_2934 glycogen branching enzyme (RefSeq)
Alteromonas macleodii MIT1002 0.30 MIT1002_00983 Isocitrate dehydrogenase [NADP] 0.45 MIT1002_02399 1,4-alpha-glucan branching enzyme GlgB
Shewanella amazonensis SB2B 0.29 Sama_2423 isocitrate dehydrogenase (RefSeq) 0.48 Sama_2453 1,4-alpha-glucan branching enzyme (RefSeq)
Shewanella oneidensis MR-1 0.29 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.49 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file)

Not shown: 16 genomes with orthologs for BPHYT_RS30235 only; 34 genomes with orthologs for BPHYT_RS33780 only