Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS30235 | | tartrate dehydrogenase | 1.0 | BPHYT_RS33780 | | glycogen branching protein | 0.26 | 3 |
Paraburkholderia graminis OAS925 | 0.98 | ABIE53_005023 | | tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase | 0.94 | ABIE53_004826 | | 1,4-alpha-glucan branching enzyme | low | > 113 |
Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_06345 | | tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase | 0.94 | H281DRAFT_06050 | | 1,4-alpha-glucan branching enzyme | low | > 103 |
Paraburkholderia sabiae LMG 24235 | 0.88 | QEN71_RS32005 | | tartrate dehydrogenase | 0.84 | QEN71_RS17730 | | 1,4-alpha-glucan branching protein GlgB | low | > 153 |
Ralstonia solanacearum PSI07 | 0.80 | RPSI07_RS07555 | | tartrate dehydrogenase | 0.61 | RPSI07_RS00885 | | 1,4-alpha-glucan branching protein GlgB | low | > 81 |
Ralstonia solanacearum GMI1000 | 0.79 | RS_RS24845 | | tartrate dehydrogenase | 0.61 | RS_RS18305 | | glycogen-branching enzyme | low | > 80 |
Ralstonia sp. UNC404CL21Col | 0.77 | ABZR87_RS21505 | | tartrate dehydrogenase | 0.62 | ABZR87_RS17215 | | 1,4-alpha-glucan branching protein GlgB | low | > 80 |
Serratia liquefaciens MT49 | 0.76 | IAI46_21025 | | tartrate dehydrogenase | 0.52 | IAI46_23940 | | 1,4-alpha-glucan branching protein GlgB | low | > 86 |
Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_28225 | | tartrate dehydrogenase | 0.60 | AO353_22945 | | glycogen branching protein | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_4932 | | Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) | 0.59 | Pf1N1B4_4678 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | low | > 87 |
Variovorax sp. OAS795 | 0.75 | ABID97_RS25885 | | tartrate dehydrogenase | 0.52 | ABID97_RS04550 | | 1,4-alpha-glucan branching protein GlgB | low | > 91 |
Herbaspirillum seropedicae SmR1 | 0.75 | HSERO_RS07390 | | tartrate dehydrogenase | 0.59 | HSERO_RS12510 | | glycogen branching protein | low | > 78 |
Pseudomonas fluorescens FW300-N2C3 | 0.75 | AO356_26735 | | tartrate dehydrogenase | 0.60 | AO356_01245 | | glycogen branching protein | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_369 | | Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) | 0.60 | Pf6N2E2_2117 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | low | > 103 |
Klebsiella michiganensis M5al | 0.74 | BWI76_RS10680 | | tartrate dehydrogenase | 0.52 | BWI76_RS26215 | | glycogen-branching enzyme | low | > 92 |
Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_2396 | | Tartrate dehydrogenase | 0.59 | Psyr_2491 | | glycogen branching enzyme | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_2396 | | Tartrate dehydrogenase | 0.59 | Psyr_2491 | | glycogen branching enzyme | low | > 86 |
Escherichia coli ECOR38 | 0.73 | HEPCGN_05015 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.53 | HEPCGN_15700 | glgB | 1,4-alpha-glucan branching enzyme | low | > 87 |
Escherichia coli ECOR27 | 0.73 | NOLOHH_17145 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.52 | NOLOHH_08675 | glgB | 1,4-alpha-glucan branching enzyme | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_01933 | | D-malate dehydrogenase [decarboxylating] | 0.53 | OHPLBJKB_00269 | | 1,4-alpha-glucan branching enzyme GlgB | low | > 73 |
Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS19735 | | tartrate dehydrogenase | 0.60 | PFLU_RS13485 | | 1,4-alpha-glucan branching protein GlgB | low | > 109 |
Escherichia coli ECRC102 | 0.72 | NIAGMN_01440 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.53 | NIAGMN_14655 | glgB | 1,4-alpha-glucan branching enzyme | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS19735 | | tartrate dehydrogenase | 0.60 | PFLU_RS13485 | | 1,4-alpha-glucan branching protein GlgB | low | > 109 |
Escherichia coli ECRC101 | 0.72 | MCAODC_18785 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.53 | MCAODC_07415 | glgB | 1,4-alpha-glucan branching enzyme | low | > 87 |
Escherichia coli ECRC99 | 0.72 | KEDOAH_01485 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.53 | KEDOAH_11255 | glgB | 1,4-alpha-glucan branching enzyme | — | — |
Escherichia coli ECRC62 | 0.72 | BNILDI_15930 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.53 | BNILDI_02840 | glgB | 1,4-alpha-glucan branching enzyme | low | > 75 |
Escherichia coli ECRC98 | 0.72 | JDDGAC_01200 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.52 | JDDGAC_20515 | glgB | 1,4-alpha-glucan branching enzyme | low | > 86 |
Escherichia coli ECRC100 | 0.72 | OKFHMN_26625 | dmlA | multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase | 0.53 | OKFHMN_16885 | glgB | 1,4-alpha-glucan branching enzyme | low | > 80 |
Escherichia coli BW25113 | 0.72 | b1800 | yeaU | predicted dehydrogenase (NCBI) | 0.53 | b3432 | glgB | glycogen branching enzyme (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.72 | ECD_01770 | | D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase | 0.53 | ECD_03284 | | 1,4-alpha-glucan branching enzyme | low | > 61 |
Rhodopseudomonas palustris CGA009 | 0.67 | TX73_008960 | | tartrate dehydrogenase | 0.50 | TX73_018885 | | 1,4-alpha-glucan branching protein GlgB | — | — |
Variovorax sp. SCN45 | 0.66 | GFF6198 | | D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) | 0.51 | GFF6333 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | low | > 127 |
Bosea sp. OAE506 | 0.66 | ABIE41_RS22540 | | tartrate dehydrogenase | 0.54 | ABIE41_RS01220 | | 1,4-alpha-glucan branching protein GlgB | low | > 77 |
Dickeya dadantii 3937 | 0.66 | DDA3937_RS04645 | | tartrate dehydrogenase | 0.50 | DDA3937_RS19745 | | 1,4-alpha-glucan branching protein GlgB | low | > 74 |
Dickeya dianthicola ME23 | 0.66 | DZA65_RS04525 | | tartrate dehydrogenase | 0.52 | DZA65_RS20930 | | 1,4-alpha-glucan branching protein GlgB | low | > 75 |
Pantoea sp. MT58 | 0.65 | IAI47_17525 | | tartrate dehydrogenase | 0.53 | IAI47_01680 | | 1,4-alpha-glucan branching enzyme | low | > 76 |
Dickeya dianthicola 67-19 | 0.65 | HGI48_RS04605 | | tartrate dehydrogenase | 0.52 | HGI48_RS19855 | | 1,4-alpha-glucan branching protein GlgB | low | > 71 |
Marinobacter adhaerens HP15 | 0.38 | HP15_817 | | 3-isopropylmalate dehydrogenase | 0.43 | HP15_1712 | | glycogen branching enzyme | low | > 73 |
Mycobacterium tuberculosis H37Rv | 0.33 | Rv2995c | | Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) | 0.43 | Rv1326c | | 1,4-alpha-glucan branching enzyme GlgB (glycogen branching enzyme) | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.31 | Xcc-8004.4057.1 | | Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) | 0.58 | Xcc-8004.186.1 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | — | — |
Shewanella loihica PV-4 | 0.30 | Shew_2760 | | isocitrate dehydrogenase (RefSeq) | 0.48 | Shew_1168 | | glycogen branching enzyme (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.30 | Shewana3_2890 | | isocitrate dehydrogenase (RefSeq) | 0.48 | Shewana3_2934 | | glycogen branching enzyme (RefSeq) | — | — |
Alteromonas macleodii MIT1002 | 0.30 | MIT1002_00983 | | Isocitrate dehydrogenase [NADP] | 0.45 | MIT1002_02399 | | 1,4-alpha-glucan branching enzyme GlgB | — | — |
Shewanella amazonensis SB2B | 0.29 | Sama_2423 | | isocitrate dehydrogenase (RefSeq) | 0.48 | Sama_2453 | | 1,4-alpha-glucan branching enzyme (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.29 | SO1538 | | isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) | 0.49 | SO1494 | glgB | 1,4-alpha-glucan branching enzyme (NCBI ptt file) | — | — |
Not shown: 16 genomes with orthologs for BPHYT_RS30235 only; 34 genomes with orthologs for BPHYT_RS33780 only