Conservation of cofitness between BPHYT_RS26170 and BPHYT_RS18610 in Burkholderia phytofirmans PsJN

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS26170 lipocalin 1.0 BPHYT_RS18610 lytic transglycosylase 0.26 16
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_02791 apolipoprotein D and lipocalin family protein 0.90 H281DRAFT_05816 soluble lytic murein transglycosylase low > 103
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS25955 lipocalin family protein 0.89 QEN71_RS28635 lytic transglycosylase domain-containing protein low > 153
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS23955 membrane protein 0.45 HSERO_RS21415 lytic transglycosylase low > 78
Pseudomonas putida KT2440 0.28 PP_4032 putative Outer membrane lipoprotein Blc 0.16 PP_2130 putative Soluble lytic transglycosylase low > 96
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_15560 lipocalin 0.12 CSW01_03655 murein transglycosylase low > 62
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3922 Bacterial lipocalin 0.13 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Acidovorax sp. GW101-3H11 0.28 Ac3H11_75 Outer membrane lipoprotein blc precursor 0.30 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 79
Serratia liquefaciens MT49 0.27 IAI46_01530 outer membrane lipoprotein Blc 0.12 IAI46_02985 murein transglycosylase low > 86
Pseudomonas sp. S08-1 0.27 OH686_10275 Outer membrane lipoprotein Blc 0.16 OH686_21900 Soluble lytic murein transglycosylase low > 80
Rahnella sp. WP5 0.27 EX31_RS08920 outer membrane lipoprotein Blc 0.13 EX31_RS03985 murein transglycosylase low > 89
Variovorax sp. SCN45 0.26 GFF5265 Outer membrane lipoprotein 0.30 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Shewanella oneidensis MR-1 0.26 SO1691 blc lipoprotein Blc (NCBI ptt file) 0.12 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS01755 lipocalin family protein 0.17 PFLU_RS07630 transglycosylase SLT domain-containing protein 0.19 47
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS21025 lipocalin family protein 0.52 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Pseudomonas simiae WCS417 0.26 PS417_01700 lipocalin 0.17 PS417_07550 lytic transglycosylase low > 88
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0368 lipoprotein Blc 0.16 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0368 lipoprotein Blc 0.16 Psyr_3295 SLT low > 86
Pseudomonas fluorescens SBW25 0.26 PFLU_RS01755 lipocalin family protein 0.17 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Klebsiella michiganensis M5al 0.26 BWI76_RS17595 hypothetical protein 0.13 BWI76_RS04185 murein transglycosylase low > 92
Erwinia tracheiphila SCR3 0.26 LU632_RS01900 blc outer membrane lipoprotein Blc 0.13 LU632_RS02575 sltY murein transglycosylase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.2106.1 Outer membrane lipoprotein Blc 0.13 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 74
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_12230 lipocalin 0.16 AO353_00530 lytic transglycosylase low > 101
Variovorax sp. OAS795 0.25 ABID97_RS07090 lipocalin family protein 0.31 ABID97_RS06595 transglycosylase SLT domain-containing protein low > 91
Escherichia coli ECRC100 0.25 OKFHMN_12370 blc lipocalin Blc 0.13 OKFHMN_11170 sltY murein transglycosylase low > 80
Escherichia coli ECRC98 0.25 JDDGAC_16005 blc lipocalin Blc 0.13 JDDGAC_14765 sltY murein transglycosylase low > 86
Escherichia coli ECRC99 0.25 KEDOAH_15795 blc lipocalin Blc 0.13 KEDOAH_16985 sltY murein transglycosylase — —
Escherichia coli ECRC102 0.25 NIAGMN_10215 blc lipocalin Blc 0.13 NIAGMN_09020 sltY murein transglycosylase — —
Escherichia coli ECOR27 0.25 NOLOHH_04630 blc lipocalin Blc 0.13 NOLOHH_03500 sltY murein transglycosylase low > 75
Escherichia coli BW25113 0.25 b4149 blc outer membrane lipoprotein (lipocalin) (NCBI) 0.13 b4392 slt soluble lytic murein transglycosylase (VIMSS) low > 76
Escherichia coli ECRC101 0.25 MCAODC_02880 blc lipocalin Blc 0.13 MCAODC_01685 sltY murein transglycosylase low > 87
Shewanella loihica PV-4 0.25 Shew_3085 Lipocalin family protein (RefSeq) 0.13 Shew_2125 lytic transglycosylase, catalytic (RefSeq) 0.24 50
Dickeya dadantii 3937 0.25 DDA3937_RS18985 outer membrane lipoprotein Blc 0.15 DDA3937_RS18455 murein transglycosylase low > 74
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_331 Outer membrane lipoprotein Blc 0.16 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. RS175 0.25 PFR28_04961 Outer membrane lipoprotein Blc 0.17 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_09650 lipocalin 0.17 AO356_02350 lytic transglycosylase low > 104
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_3809 Outer membrane lipoprotein Blc 0.17 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Escherichia fergusonii Becca 0.25 EFB2_04384 Outer membrane lipoprotein Blc 0.13 EFB2_04052 Soluble lytic murein transglycosylase low > 86
Escherichia coli ECRC62 0.25 BNILDI_06860 blc lipocalin Blc 0.13 BNILDI_08095 sltY murein transglycosylase low > 75
Escherichia coli Nissle 1917 0.25 ECOLIN_RS24105 lipocalin Blc 0.13 ECOLIN_RS25210 murein transglycosylase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF2000 Outer membrane lipoprotein Blc 0.13 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 78
Pseudomonas stutzeri RCH2 0.24 Psest_3953 Bacterial lipocalin 0.17 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Lysobacter sp. OAE881 0.24 ABIE51_RS03765 lipocalin family protein 0.13 ABIE51_RS19070 transglycosylase SLT domain-containing protein low > 62
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_1592 Outer membrane lipoprotein Blc 0.17 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_04390 Outer membrane lipoprotein Blc 0.14 OKGIIK_16395 Lytic transglycosylase low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF1563 Outer membrane lipoprotein blc precursor 0.27 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 90
Rhodanobacter denitrificans MT42 0.23 LRK55_RS15500 lipocalin family protein 0.14 LRK55_RS06980 transglycosylase SLT domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS15745 lipocalin family protein 0.14 LRK54_RS07245 transglycosylase SLT domain-containing protein low > 59

Not shown: 13 genomes with orthologs for BPHYT_RS26170 only; 20 genomes with orthologs for BPHYT_RS18610 only