Conservation of cofitness between BPHYT_RS08730 and BPHYT_RS14840 in Burkholderia phytofirmans PsJN

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS08730 hypothetical protein 1.0 BPHYT_RS14840 lytic transglycosylase 0.22 20
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_00769 hypothetical protein 0.92 H281DRAFT_03910 membrane-bound lytic murein transglycosylase B low > 103
Paraburkholderia graminis OAS925 0.97 ABIE53_001981 uncharacterized protein (DUF3820 family) 0.89 ABIE53_003143 membrane-bound lytic murein transglycosylase B low > 113
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS22640 DUF3820 family protein 0.80 QEN71_RS04140 lytic murein transglycosylase B low > 153
Cupriavidus basilensis FW507-4G11 0.85 RR42_RS27745 hypothetical protein 0.52 RR42_RS04540 lytic transglycosylase low > 128
Pseudomonas stutzeri RCH2 0.83 Psest_1458 Uncharacterized protein conserved in bacteria 0.30 Psest_0514 lytic murein transglycosylase B low > 67
Ralstonia solanacearum PSI07 0.82 RPSI07_RS08385 hypothetical protein 0.51 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Pseudomonas sp. S08-1 0.81 OH686_18670 Uncharacterized protein YpeB 0.29 OH686_09310 lytic murein transglycosylase B low > 80
Ralstonia solanacearum UW163 0.81 UW163_RS04725 hypothetical protein 0.51 UW163_RS15980 lytic murein transglycosylase B — —
Ralstonia solanacearum GMI1000 0.81 RS_RS16700 hypothetical protein 0.51 RS_RS04565 lytic murein transglycosylase B low > 80
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS08885 hypothetical protein 0.51 RALBFv3_RS13830 lytic murein transglycosylase B low > 76
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS04155 DUF3820 family protein 0.51 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_583 FIG00957748: hypothetical protein 0.29 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1123 conserved hypothetical protein 0.29 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1123 conserved hypothetical protein 0.29 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_03335 hypothetical protein 0.30 AO353_06465 lytic transglycosylase low > 101
Hydrogenophaga sp. GW460-11-11-14-LB1 0.78 GFF4965 Putative cytoplasmic protein 0.32 GFF5533 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 90
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1906 FIG00957748: hypothetical protein 0.29 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_05140 hypothetical protein 0.31 AO356_15320 lytic transglycosylase low > 104
Dechlorosoma suillum PS 0.78 Dsui_0949 hypothetical protein 0.29 Dsui_1972 lytic murein transglycosylase B low > 51
Variovorax sp. SCN45 0.76 GFF5018 Uncharacterized protein YpeB 0.35 GFF2666 Membrane-bound lytic murein transglycosylase B low > 127
Pseudomonas fluorescens SBW25 0.76 PFLU_RS23705 DUF3820 family protein 0.29 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS23705 DUF3820 family protein 0.29 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas simiae WCS417 0.76 PS417_22090 hypothetical protein 0.29 PS417_24715 lytic transglycosylase — —
Variovorax sp. OAS795 0.72 ABID97_RS04120 DUF3820 family protein 0.33 ABID97_RS19915 lytic murein transglycosylase B low > 91
Acidovorax sp. GW101-3H11 0.71 Ac3H11_1029 Putative cytoplasmic protein 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Shewanella oneidensis MR-1 0.49 SO3326 conserved hypothetical protein (NCBI ptt file) 0.24 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_1217 hypothetical protein (RefSeq) 0.25 Shewana3_0993 lytic murein transglycosylase B (RefSeq) low > 73
Rahnella sp. WP5 0.47 EX31_RS20155 DUF3820 family protein 0.25 EX31_RS07810 lytic murein transglycosylase B low > 89
Dickeya dianthicola 67-19 0.45 HGI48_RS17140 DUF3820 family protein 0.25 HGI48_RS03780 lytic murein transglycosylase B low > 71
Serratia liquefaciens MT49 0.45 IAI46_18425 DUF3820 family protein 0.27 IAI46_18155 lytic murein transglycosylase B low > 86
Klebsiella michiganensis M5al 0.44 BWI76_RS20620 negative regulator 0.27 BWI76_RS22210 murein transglycosylase B — —
Shewanella loihica PV-4 0.44 Shew_1282 hypothetical protein (RefSeq) 0.24 Shew_2937 lytic murein transglycosylase B (RefSeq) — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS13850 DUF3820 family protein 0.27 ECOLIN_RS27170 lytic murein transglycosylase B — —
Escherichia coli BW25113 0.44 b4546 ypeB hypothetical protein (NCBI) 0.26 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Escherichia coli BL21 0.44 ECD_02310 DUF3820 family protein 0.26 ECD_02551 membrane-bound lytic murein transglycosylase B low > 61
Escherichia fergusonii Becca 0.43 EFB2_01466 hypothetical protein 0.26 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Dickeya dianthicola ME23 0.43 DZA65_RS18225 hypothetical protein 0.25 DZA65_RS03910 lytic murein transglycosylase B low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2040 FIG074102: hypothetical protein 0.26 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Pantoea sp. MT58 0.42 IAI47_05460 DUF3820 family protein 0.26 IAI47_04275 lytic murein transglycosylase B low > 76
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0218 Uncharacterized protein conserved in bacteria 0.26 EX28DRAFT_2790 lytic murein transglycosylase B 0.62 51
Pectobacterium carotovorum WPP14 0.40 HER17_RS04050 DUF3820 family protein 0.25 HER17_RS16185 lytic murein transglycosylase B low > 75

Not shown: 19 genomes with orthologs for BPHYT_RS08730 only; 10 genomes with orthologs for BPHYT_RS14840 only