| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS09015 | | multidrug transporter MatE | 1.0 | BPHYT_RS12380 | | ABC transporter permease | 0.29 | 4 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.88 | H281DRAFT_00822 | | multidrug resistance protein, MATE family | 0.93 | H281DRAFT_00561 | | microcin C transport system permease protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.86 | ABIE53_002038 | | MATE family multidrug resistance protein | 0.93 | ABIE53_002549 | | microcin C transport system permease protein | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.78 | QEN71_RS22335 | | MATE family efflux transporter | 0.89 | QEN71_RS06175 | | ABC transporter permease subunit | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.50 | RS_RS05915 | | MATE family efflux transporter | 0.74 | RS_RS05855 | | microcin C ABC transporter permease YejB | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS10730 | | MATE family efflux transporter | 0.74 | ABZR87_RS10685 | | microcin C ABC transporter permease YejB | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS13335 | | multidrug transporter MatE | 0.75 | RR42_RS13380 | | microcin ABC transporter permease | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.48 | RALBFv3_RS15100 | | MATE family efflux transporter | 0.74 | RALBFv3_RS15040 | | microcin C ABC transporter permease YejB | low | > 76 |
| Ralstonia solanacearum UW163 | 0.48 | UW163_RS12570 | | MATE family efflux transporter | 0.74 | UW163_RS12510 | | microcin C ABC transporter permease YejB | — | — |
| Ralstonia solanacearum PSI07 | 0.48 | RPSI07_RS18275 | | MATE family efflux transporter | 0.72 | RPSI07_RS18335 | | microcin C ABC transporter permease YejB | low | > 81 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS04300 | | multidrug transporter MatE | 0.74 | HSERO_RS17140 | | ABC transporter permease | low | > 78 |
| Variovorax sp. OAS795 | 0.36 | ABID97_RS14630 | | MATE family efflux transporter | 0.73 | ABID97_RS16515 | | ABC transporter permease subunit | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_463 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog | 0.72 | Ac3H11_2910 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | low | > 79 |
| Pseudomonas stutzeri RCH2 | 0.30 | Psest_2549 | | putative efflux protein, MATE family | 0.58 | Psest_2066 | | ABC-type uncharacterized transport system, permease component | low | > 67 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_3892 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.60 | Pf1N1B4_4592 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_07530 | | multidrug transporter | 0.59 | PS417_12200 | | microcin ABC transporter permease | low | > 88 |
| Variovorax sp. SCN45 | 0.29 | GFF1099 | | Na+-driven multidrug efflux pump | 0.70 | GFF228 | | ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) | low | > 127 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_00550 | | MATE family efflux transporter | 0.60 | AO353_23470 | | microcin ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_02370 | | MATE family efflux transporter | 0.59 | AO356_24460 | | microcin ABC transporter permease | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_4049 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.60 | PfGW456L13_3344 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS07610 | | MATE family efflux transporter | 0.59 | PFLU_RS12890 | | microcin C ABC transporter permease YejB | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS07610 | | MATE family efflux transporter | 0.59 | PFLU_RS12890 | | microcin C ABC transporter permease YejB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_2298 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.59 | Pf6N2E2_583 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | low | > 103 |
| Pseudomonas sp. RS175 | 0.28 | PFR28_01102 | | Multidrug resistance protein NorM | 0.60 | PFR28_01548 | | Inner membrane ABC transporter permease protein YejB | low | > 88 |
| Pseudomonas sp. S08-1 | 0.28 | OH686_02075 | | Na(+)/drug antiporter, MATE family of MDR efflux pumps | 0.59 | OH686_03605 | | ABC transporter premease protein | low | > 80 |
| Marinobacter adhaerens HP15 | 0.27 | HP15_3913 | | multidrug resistance protein NorM | 0.57 | HP15_1808 | | peptide ABC transporter, permease protein | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.25 | CSW01_07735 | | multidrug resistance protein NorM | 0.57 | CSW01_17180 | | peptide ABC transporter permease | low | > 62 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_01973 | | Multidrug resistance protein MdtK | 0.56 | MPMX20_03144 | | Inner membrane ABC transporter permease protein YejB | low | > 85 |
| Rahnella sp. WP5 | 0.24 | EX31_RS13855 | | MATE family efflux transporter | 0.54 | EX31_RS19135 | | microcin C ABC transporter permease YejB | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.24 | HER17_RS09220 | | MATE family efflux transporter | 0.56 | HER17_RS12925 | | microcin C ABC transporter permease YejB | low | > 75 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_1660 | | putative efflux protein, MATE family | 0.57 | EX28DRAFT_0383 | | ABC-type uncharacterized transport system, permease component | low | > 76 |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS12700 | | MATE family efflux transporter | 0.56 | HGI48_RS09225 | | microcin C ABC transporter permease YejB | low | > 71 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS16535 | | MATE family efflux transporter | 0.55 | BWI76_RS19785 | | microcin C ABC transporter permease YejB | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.23 | LU632_RS11170 | | MATE family efflux transporter | 0.55 | LU632_RS17570 | | microcin C ABC transporter permease YejB | low | > 74 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS13155 | | MATE family efflux transporter | 0.55 | DZA65_RS09530 | | microcin C ABC transporter permease YejB | 0.40 | 40 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_11210 | | MATE family efflux transporter | 0.55 | IAI46_17320 | | microcin C ABC transporter permease YejB | low | > 86 |
| Pantoea sp. MT58 | 0.23 | IAI47_10820 | | MATE family efflux transporter | 0.55 | IAI47_06610 | | microcin C ABC transporter permease YejB | low | > 76 |
| Escherichia coli BL21 | 0.23 | ECD_01634 | | multidrug efflux system transporter | 0.56 | ECD_02108 | | microcin C ABC transporter permease | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_02061 | | Multidrug resistance protein MdtK | 0.56 | OHPLBJKB_01531 | | Inner membrane ABC transporter permease protein YejB | low | > 73 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | 0.56 | ECOLIN_RS12735 | | microcin C ABC transporter permease YejB | — | — |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_17880 | mdtK | multidrug efflux MATE transporter MdtK | 0.57 | NOLOHH_14960 | yejB | Inner membrane ABC transporter permease protein YejB | low | > 75 |
| Escherichia coli ECRC100 | 0.23 | OKFHMN_27360 | mdtK | multidrug efflux MATE transporter MdtK | 0.56 | OKFHMN_23385 | yejB | Inner membrane ABC transporter permease protein YejB | low | > 80 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_16670 | mdtK | multidrug efflux MATE transporter MdtK | 0.57 | BNILDI_13880 | yejB | Inner membrane ABC transporter permease protein YejB | low | > 75 |
| Escherichia coli BW25113 | 0.23 | b1663 | mdtK | multidrug efflux protein NorM (NCBI) | 0.56 | b2178 | yejB | predicted oligopeptide transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_05745 | mdtK | multidrug efflux MATE transporter MdtK | 0.56 | HEPCGN_22650 | yejB | Inner membrane ABC transporter permease protein YejB | low | > 87 |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_01950 | mdtK | multidrug efflux MATE transporter MdtK | 0.56 | JDDGAC_27345 | yejB | Inner membrane ABC transporter permease protein YejB | low | > 86 |
| Escherichia coli ECRC101 | 0.23 | MCAODC_18050 | mdtK | multidrug efflux MATE transporter MdtK | 0.56 | MCAODC_14435 | yejB | Inner membrane ABC transporter permease protein YejB | low | > 87 |
| Escherichia fergusonii Becca | 0.23 | EFB2_02329 | | Multidrug resistance protein MdtK | 0.56 | EFB2_01678 | | Inner membrane ABC transporter permease protein YejB | low | > 86 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_00750 | mdtK | multidrug efflux MATE transporter MdtK | 0.56 | KEDOAH_04800 | yejB | Inner membrane ABC transporter permease protein YejB | — | — |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_00705 | mdtK | multidrug efflux MATE transporter MdtK | 0.56 | NIAGMN_21150 | yejB | Inner membrane ABC transporter permease protein YejB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.22 | GFF3613 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.57 | GFF3758 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | low | > 78 |
| Acinetobacter radioresistens SK82 | 0.21 | MPMX26_00306 | | Multidrug resistance protein NorM | 0.50 | MPMX26_02272 | | Inner membrane ABC transporter permease protein YejB | low | > 36 |
Not shown: 10 genomes with orthologs for BPHYT_RS09015 only; 13 genomes with orthologs for BPHYT_RS12380 only