Conservation of cofitness between BPHYT_RS06770 and BPHYT_RS12185 in Burkholderia phytofirmans PsJN

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06770 aminotransferase 1.0 BPHYT_RS12185 succinyldiaminopimelate aminotransferase 0.49 5
Paraburkholderia graminis OAS925 0.97 ABIE53_001620 methionine aminotransferase 0.83 ABIE53_002516 N-succinyldiaminopimelate aminotransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_04597 2-keto-4-methylthiobutyrate aminotransferase apoenzyme 0.93 H281DRAFT_00600 succinyldiaminopimelate aminotransferase apoenzyme low > 103
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS24010 pyridoxal phosphate-dependent aminotransferase 0.90 QEN71_RS06370 succinyldiaminopimelate transaminase low > 153
Ralstonia solanacearum PSI07 0.80 RPSI07_RS14585 pyridoxal phosphate-dependent aminotransferase 0.74 RPSI07_RS17155 succinyldiaminopimelate transaminase low > 81
Ralstonia solanacearum UW163 0.79 UW163_RS10995 pyridoxal phosphate-dependent aminotransferase 0.74 UW163_RS13650 succinyldiaminopimelate transaminase — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS02730 pyridoxal phosphate-dependent aminotransferase 0.74 RALBFv3_RS00320 succinyldiaminopimelate transaminase low > 76
Ralstonia solanacearum GMI1000 0.79 RS_RS10105 pyridoxal phosphate-dependent aminotransferase 0.74 RS_RS06990 succinyldiaminopimelate transaminase low > 80
Ralstonia sp. UNC404CL21Col 0.79 ABZR87_RS14645 pyridoxal phosphate-dependent aminotransferase 0.74 ABZR87_RS11770 succinyldiaminopimelate transaminase low > 80
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS15115 aminotransferase 0.72 HSERO_RS10805 succinyldiaminopimelate aminotransferase low > 78
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS05770 aminotransferase 0.72 RR42_RS11930 succinyldiaminopimelate aminotransferase low > 128
Acidovorax sp. GW101-3H11 0.69 Ac3H11_2404 Aspartate aminotransferase (EC 2.6.1.1) 0.66 Ac3H11_2295 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 79
Variovorax sp. SCN45 0.67 GFF245 Aspartate aminotransferase (EC 2.6.1.1) 0.63 GFF254 N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 low > 127
Variovorax sp. OAS795 0.67 ABID97_RS16605 pyridoxal phosphate-dependent aminotransferase 0.63 ABID97_RS16630 succinyldiaminopimelate transaminase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4304 Aspartate aminotransferase (EC 2.6.1.1) 0.63 GFF4553 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 90
Dechlorosoma suillum PS 0.58 Dsui_3376 aspartate/tyrosine/aromatic aminotransferase 0.66 Dsui_2708 succinyldiaminopimelate transaminase low > 51
Pseudomonas sp. S08-1 0.51 OH686_17555 Methionine aminotransferase, PLP-dependent or Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase 0.51 OH686_06500 succinyldiaminopimelate transaminase low > 80
Pseudomonas stutzeri RCH2 0.51 Psest_1268 Aspartate/tyrosine/aromatic aminotransferase 0.52 Psest_1470 succinyldiaminopimelate transaminase low > 67
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4856 Aspartate aminotransferase (EC 2.6.1.1) 0.52 PfGW456L13_4713 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 87
Pantoea sp. MT58 0.51 IAI47_15225 pyridoxal phosphate-dependent aminotransferase 0.54 IAI47_19335 succinyldiaminopimelate transaminase low > 76
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_15915 aminotransferase 0.51 AO353_16445 succinyldiaminopimelate transaminase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme 0.51 Psyr_1340 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme 0.51 Psyr_1340 Aminotransferase, class I and II low > 86
Pseudomonas putida KT2440 0.50 PP_0858 putative methionine/glutamine aminotransferase 0.50 PP_1588 N-succinyl-L,L-diaminopimelate aminotransferase alternative low > 96
Pseudomonas fluorescens SBW25 0.50 PFLU_RS24775 pyridoxal phosphate-dependent aminotransferase 0.51 PFLU_RS06260 succinyldiaminopimelate transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS24775 pyridoxal phosphate-dependent aminotransferase 0.51 PFLU_RS06260 succinyldiaminopimelate transaminase low > 109
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_3173 Aspartate aminotransferase (EC 2.6.1.1) 0.52 Pf6N2E2_3073 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 103
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_849 Aspartate aminotransferase (EC 2.6.1.1) 0.51 Pf1N1B4_3080 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 87
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_06565 aminotransferase 0.52 AO356_06055 succinyldiaminopimelate transaminase low > 104
Pseudomonas simiae WCS417 0.49 PS417_23120 aminotransferase 0.51 PS417_06195 succinyldiaminopimelate aminotransferase low > 88
Pseudomonas sp. RS175 0.49 PFR28_00302 Methionine aminotransferase 0.52 PFR28_00393 LL-diaminopimelate aminotransferase low > 88
Acinetobacter radioresistens SK82 0.45 MPMX26_02954 Methionine aminotransferase 0.49 MPMX26_01868 LL-diaminopimelate aminotransferase low > 36
Azospirillum sp. SherDot2 0.38 MPMX19_04906 Methionine aminotransferase 0.34 MPMX19_05519 LL-diaminopimelate aminotransferase 0.70 1
Rhodospirillum rubrum S1H 0.35 Rru_A2084 Aminotransferase, class I and II (NCBI) 0.33 Rru_A3706 Aminotransferase, class I and II (NCBI) low > 58
Azospirillum brasilense Sp245 0.35 AZOBR_RS20195 aminotransferase 0.33 AZOBR_RS02295 aspartate aminotransferase low > 97
Magnetospirillum magneticum AMB-1 0.35 AMB_RS03565 pyridoxal phosphate-dependent aminotransferase 0.31 AMB_RS00085 aspartate aminotransferase low > 64
Rhodopseudomonas palustris CGA009 0.34 TX73_010375 aminotransferase 0.28 TX73_001450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 86
Mycobacterium tuberculosis H37Rv 0.32 Rv0858c Probable N-succinyldiaminopimelate aminotransferase DapC (DAP-at) 0.15 Rv1178 Probable aminotransferase low > 58

Not shown: 30 genomes with orthologs for BPHYT_RS06770 only; 3 genomes with orthologs for BPHYT_RS12185 only