Conservation of cofitness between BPHYT_RS16490 and BPHYT_RS03535 in Burkholderia phytofirmans PsJN

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16490 glycerol-3-phosphate dehydrogenase 1.0 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.29 17
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_04228 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 0.98 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 103
Paraburkholderia graminis OAS925 0.90 ABIE53_003468 glycerol-3-phosphate dehydrogenase 0.98 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase low > 113
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS02235 glycerol-3-phosphate dehydrogenase 0.96 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG — —
Variovorax sp. SCN45 0.60 GFF2677 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.64 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.63 29
Variovorax sp. OAS795 0.58 ABID97_RS19955 glycerol-3-phosphate dehydrogenase 0.64 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase low > 91
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS04840 glycerol-3-phosphate dehydrogenase 0.83 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS03020 glycerol-3-phosphate dehydrogenase 0.86 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG low > 80
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase 0.67 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase low > 74
Ralstonia solanacearum PSI07 0.55 RPSI07_RS09885 glycerol-3-phosphate dehydrogenase 0.85 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.471.1 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.66 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) low > 74
Ralstonia solanacearum GMI1000 0.54 RS_RS15300 glycerol-3-phosphate dehydrogenase 0.85 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase low > 80
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS07360 glycerol-3-phosphate dehydrogenase 0.84 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS06260 glycerol-3-phosphate dehydrogenase 0.84 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase — —
Rhodopseudomonas palustris CGA009 0.48 TX73_022860 glycerol-3-phosphate dehydrogenase 0.63 TX73_000140 3-deoxy-7-phosphoheptulonate synthase low > 86
Pseudomonas sp. S08-1 0.48 OH686_20360 Aerobic glycerol-3-phosphate dehydrogenase 0.47 OH686_01760 3-deoxy-7-phosphoheptulonate synthase — —
Pseudomonas stutzeri RCH2 0.47 Psest_2775 Glycerol-3-phosphate dehydrogenase 0.47 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase low > 67
Dickeya dadantii 3937 0.45 DDA3937_RS19720 glycerol-3-phosphate dehydrogenase 0.66 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG — —
Rahnella sp. WP5 0.44 EX31_RS05000 glycerol-3-phosphate dehydrogenase 0.66 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG low > 89
Dickeya dianthicola 67-19 0.44 HGI48_RS19815 glycerol-3-phosphate dehydrogenase 0.66 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG low > 71
Serratia liquefaciens MT49 0.44 IAI46_23915 glycerol-3-phosphate dehydrogenase 0.67 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG low > 86
Dickeya dianthicola ME23 0.44 DZA65_RS20905 glycerol-3-phosphate dehydrogenase 0.67 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Pectobacterium carotovorum WPP14 0.44 HER17_RS01510 glycerol-3-phosphate dehydrogenase 0.67 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG — —
Erwinia tracheiphila SCR3 0.43 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase 0.64 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Pantoea sp. MT58 0.43 IAI47_01750 glycerol-3-phosphate dehydrogenase 0.65 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase 0.66 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 73
Escherichia coli BL21 0.43 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 0.66 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible low > 61
Escherichia coli BW25113 0.43 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) 0.66 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) low > 76
Escherichia coli ECOR27 0.43 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase 0.66 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Escherichia coli ECRC102 0.43 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase 0.66 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Escherichia coli ECRC101 0.43 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase 0.66 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 87
Escherichia coli ECRC62 0.43 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase 0.66 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Escherichia coli ECRC100 0.43 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase 0.66 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 80
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase 0.65 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.74 28
Escherichia coli ECOR38 0.43 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase 0.66 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 87
Escherichia coli ECRC98 0.43 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase 0.66 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 86
Escherichia coli ECRC99 0.43 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase 0.66 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Escherichia fergusonii Becca 0.42 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase 0.66 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 86
Escherichia coli Nissle 1917 0.42 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase 0.66 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG — —
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_17495 glycerol-3-phosphate dehydrogenase 0.64 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase low > 62
Enterobacter sp. TBS_079 0.41 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase 0.65 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.66 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) — —
Klebsiella michiganensis M5al 0.41 BWI76_RS26190 glycerol-3-phosphate dehydrogenase 0.65 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase low > 92
Acidovorax sp. GW101-3H11 0.19 Ac3H11_797 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.63 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF2815 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.62 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 90
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS13815 FAD-dependent oxidoreductase 0.85 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase — —
Castellaniella sp019104865 MT123 0.17 ABCV34_RS05860 glycerol-3-phosphate dehydrogenase/oxidase 0.71 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG — —
Rhodanobacter denitrificans MT42 0.16 LRK55_RS15125 glycerol-3-phosphate dehydrogenase/oxidase 0.67 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase 0.67 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase low > 59

Not shown: 27 genomes with orthologs for BPHYT_RS16490 only; 12 genomes with orthologs for BPHYT_RS03535 only