| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS19670 | | DSBA oxidoreductase | 1.0 | BPHYT_RS02905 | | RNA polymerase subunit sigma-54 | 0.36 | 3 |
| Paraburkholderia graminis OAS925 | 0.94 | ABIE53_000311 | | DHA2 family multidrug resistance protein | 0.94 | ABIE53_000718 | | RNA polymerase sigma-54 factor | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.92 | H281DRAFT_02341 | | MFS transporter, DHA2 family, multidrug resistance protein | 0.95 | H281DRAFT_01927 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | low | > 103 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_03564 | | Multidrug export protein EmrB | 0.38 | MPMX20_04108 | | RNA polymerase sigma-54 factor | — | — |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS17910 | | multidrug efflux MFS transporter permease subunit EmrB | 0.39 | DZA65_RS01510 | | RNA polymerase factor sigma-54 | low | > 75 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS16835 | | multidrug efflux MFS transporter permease subunit EmrB | 0.39 | HGI48_RS01445 | | RNA polymerase factor sigma-54 | low | > 71 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_2769 | | drug resistance transporter, EmrB/QacA subfamily | 0.40 | EX28DRAFT_3256 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | — | — |
| Pantoea sp. MT58 | 0.54 | IAI47_04495 | | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | IAI47_17185 | | RNA polymerase factor sigma-54 | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF1593 | | Multidrug resistance protein B | 0.40 | GFF2946 | | RNA polymerase sigma-54 factor RpoN | low | > 78 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS22100 | | multidrug effux MFS transporter subunit EmrB | 0.39 | BWI76_RS25265 | | RNA polymerase factor sigma-54 | — | — |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS16765 | | multidrug efflux MFS transporter permease subunit EmrB | 0.39 | DDA3937_RS01530 | | RNA polymerase factor sigma-54 | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS16115 | | DHA2 family efflux MFS transporter permease subunit | 0.35 | LRK54_RS12875 | | RNA polymerase factor sigma-54 | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS15865 | | DHA2 family efflux MFS transporter permease subunit | 0.35 | LRK55_RS12575 | | RNA polymerase factor sigma-54 | low | > 63 |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS14970 | | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | ECOLIN_RS18425 | | RNA polymerase factor sigma-54 | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_01242 | | Multidrug export protein EmrB | 0.40 | EFB2_00621 | | RNA polymerase sigma-54 factor | — | — |
| Escherichia coli ECRC101 | 0.51 | MCAODC_11300 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | MCAODC_08460 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECOR27 | 0.51 | NOLOHH_12615 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | NOLOHH_09740 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC62 | 0.51 | BNILDI_11175 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | BNILDI_01795 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_01047 | | Multidrug export protein EmrB | 0.40 | OHPLBJKB_00498 | | RNA polymerase sigma-54 factor | — | — |
| Escherichia coli BL21 | 0.51 | ECD_02541 | | multidrug efflux system protein | 0.40 | ECD_03067 | | RNA polymerase, sigma 54 (sigma N) factor | low | > 61 |
| Escherichia coli ECRC100 | 0.51 | OKFHMN_20775 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | OKFHMN_17940 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli BW25113 | 0.51 | b2686 | emrB | multidrug efflux system protein (NCBI) | 0.40 | b3202 | rpoN | DNA-directed RNA polymerase subunit N (NCBI) | — | — |
| Escherichia coli ECOR38 | 0.51 | HEPCGN_19970 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | HEPCGN_16815 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC98 | 0.51 | JDDGAC_24440 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | JDDGAC_21565 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC99 | 0.51 | KEDOAH_07360 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | KEDOAH_10210 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Escherichia coli ECRC102 | 0.51 | NIAGMN_18545 | emrB | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | NIAGMN_15700 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS04460 | | multidrug efflux MFS transporter permease subunit EmrB | 0.39 | HER17_RS20060 | | RNA polymerase factor sigma-54 | low | > 75 |
| Rahnella sp. WP5 | 0.51 | EX31_RS13660 | | multidrug efflux MFS transporter permease subunit EmrB | 0.40 | EX31_RS12400 | | RNA polymerase factor sigma-54 | low | > 89 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_20005 | | multidrug efflux MFS transporter permease subunit EmrB | 0.39 | IAI46_22470 | | RNA polymerase factor sigma-54 | — | — |
| Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_08535 | emrB | MFS transporter | 0.36 | OKGIIK_02265 | | RNA polymerase factor sigma-54 | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS06395 | | DHA2 family efflux MFS transporter permease subunit | 0.36 | ABZR86_RS19815 | | RNA polymerase factor sigma-54 | low | > 74 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_16910 | | multidrug resistance protein B | 0.40 | PS417_04345 | | RNA polymerase factor sigma-54 | — | — |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS18895 | | DHA2 family efflux MFS transporter permease subunit | 0.40 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS18895 | | DHA2 family efflux MFS transporter permease subunit | 0.40 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_27840 | | multidrug resistance protein B | 0.40 | AO353_05180 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_4002 | | Inner membrane component of tripartite multidrug resistance system | 0.39 | Pf1N1B4_1080 | | RNA polymerase sigma-54 factor RpoN | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_01025 | | multidrug resistance protein B | 0.39 | AO356_07035 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas putida KT2440 | 0.47 | PP_3548 | | multidrug efflux transport system - permease subunit | 0.40 | PP_0952 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas sp. RS175 | 0.47 | PFR28_02747 | | Multidrug export protein EmrB | 0.39 | PFR28_00173 | | RNA polymerase sigma-54 factor | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_2606 | | Inner membrane component of tripartite multidrug resistance system | 0.39 | PfGW456L13_5014 | | RNA polymerase sigma-54 factor RpoN | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_1731 | | Drug resistance transporter EmrB/QacA subfamily | 0.40 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_1731 | | Drug resistance transporter EmrB/QacA subfamily | 0.40 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_149 | | Inner membrane component of tripartite multidrug resistance system | 0.38 | Pf6N2E2_3267 | | RNA polymerase sigma-54 factor RpoN | — | — |
| Lysobacter sp. OAE881 | 0.45 | ABIE51_RS07705 | | DHA2 family efflux MFS transporter permease subunit | 0.35 | ABIE51_RS15955 | | RNA polymerase factor sigma-54 | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.3524.1 | | Inner membrane component of tripartite multidrug resistance system | 0.34 | Xcc-8004.1662.1 | | RNA polymerase sigma-54 factor RpoN | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_07075 | | MFS transporter | 0.38 | CSW01_12815 | | RNA polymerase sigma-54 factor | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02394 | | Multidrug export protein EmrB | 0.32 | MPMX26_02592 | | RNA polymerase sigma-54 factor | low | > 36 |
| Desulfovibrio vulgaris Miyazaki F | 0.34 | DvMF_1099 | | drug resistance transporter, EmrB/QacA subfamily (RefSeq) | 0.28 | DvMF_0427 | | RNA polymerase, sigma 54 subunit, RpoN (RefSeq) | — | — |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS09490 | | DHA2 family efflux MFS transporter permease subunit | 0.39 | LU632_RS21280 | rpoN | RNA polymerase factor sigma-54 | — | — |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS21925 | | DHA2 family efflux MFS transporter permease subunit | 0.27 | ABIE40_RS01860 | | RNA polymerase factor sigma-54 | low | > 107 |
| Dechlorosoma suillum PS | 0.15 | Dsui_1523 | | drug resistance transporter, EmrB/QacA subfamily | 0.52 | Dsui_0704 | | RNA polymerase sigma-54 factor | low | > 51 |
Not shown: 2 genomes with orthologs for BPHYT_RS19670 only; 43 genomes with orthologs for BPHYT_RS02905 only