Conservation of cofitness between B158DRAFT_0396 and B158DRAFT_2395 in Kangiella aquimarina DSM 16071

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB 1.0 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.35 9
Shewanella amazonensis SB2B 0.40 Sama_0041 sun protein (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Shewanella sp. ANA-3 0.40 Shewana3_0033 sun protein (RefSeq) 0.37 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.58 16
Shewanella oneidensis MR-1 0.39 SO0030 sun sun protein (NCBI ptt file) 0.37 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.39 Shew_3738 sun protein (RefSeq) 0.36 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) low > 62
Erwinia tracheiphila SCR3 0.38 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.74 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 74
Pseudomonas stutzeri RCH2 0.37 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB 0.34 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) low > 67
Pantoea sp. MT58 0.36 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.73 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Dickeya dianthicola ME23 0.36 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.34 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Rahnella sp. WP5 0.36 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.77 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.34 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Dickeya dianthicola 67-19 0.36 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.79 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Dickeya dadantii 3937 0.36 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.78 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Pectobacterium carotovorum WPP14 0.35 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.77 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas simiae WCS417 0.35 PS417_00085 16S rRNA methyltransferase 0.35 PS417_01210 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.35 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.35 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.79 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 73
Escherichia coli BL21 0.35 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.79 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli ECRC62 0.35 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.79 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECOR27 0.35 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.79 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli BW25113 0.35 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.79 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Serratia liquefaciens MT49 0.35 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.79 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia fergusonii Becca 0.35 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.79 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECOR38 0.35 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.79 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_10630 16S rRNA methyltransferase 0.34 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Escherichia coli Nissle 1917 0.35 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.79 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_11275 16S rRNA methyltransferase 0.33 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.33 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.35 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Escherichia coli ECRC102 0.35 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas sp. RS175 0.35 PFR28_04663 Ribosomal RNA small subunit methyltransferase B 0.35 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Escherichia coli ECRC101 0.35 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC98 0.35 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECRC99 0.35 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC100 0.35 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.78 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Marinobacter adhaerens HP15 0.35 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.34 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Klebsiella michiganensis M5al 0.35 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.77 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Enterobacter sp. TBS_079 0.34 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.77 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.78 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Alteromonas macleodii MIT1002 0.34 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.37 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] low > 70
Pseudomonas sp. S08-1 0.34 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.34 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Bosea sp. OAE506 0.20 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.42 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Rhizobium sp. OAE497 0.19 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.43 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Rhodopseudomonas palustris CGA009 0.19 TX73_000155 transcription antitermination factor NusB 0.45 TX73_001865 phosphoenolpyruvate carboxykinase — —
Sinorhizobium meliloti 1021 0.19 SMc04090 sun protein 0.44 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Agrobacterium fabrum C58 0.18 Atu2825 Sun protein 0.45 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Dinoroseobacter shibae DFL-12 0.18 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.42 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) low > 64
Fusobacterium nucleatum SB010 0.18 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.39 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) low > 35
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases 0.41 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) low > 68

Not shown: 30 genomes with orthologs for B158DRAFT_0396 only; 10 genomes with orthologs for B158DRAFT_2395 only