| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_2180 | | RNA polymerase, sigma-24 subunit, RpoE | 1.0 | B158DRAFT_1732 | | C-terminal peptidase (prc) | 0.52 | 19 |
| Shewanella loihica PV-4 | 0.72 | Shew_1048 | | RNA polymerase sigma factor RpoE (RefSeq) | 0.36 | Shew_1802 | | carboxy-terminal protease (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.71 | SO1342 | rpoE | RNA polymerase sigma-24 factor (NCBI ptt file) | 0.34 | SO2601 | | carboxyl-terminal protease (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3032 | | RNA polymerase sigma factor RpoE (RefSeq) | 0.34 | Shewana3_1778 | | carboxy-terminal protease (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_02719 | | Sigma-24 | 0.34 | MIT1002_02025 | | Tail-specific protease precursor | — | — |
| Pseudomonas sp. S08-1 | 0.70 | OH686_20045 | | RNA polymerase sigma factor RpoE | 0.36 | OH686_19710 | | Tail-specific protease precursor | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.69 | CSW01_12485 | | RNA polymerase sigma factor RpoE | 0.36 | CSW01_07515 | | tail-specific protease | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.69 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | 0.38 | PFLU_RS09980 | | peptidase S41 | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_3100 | | RNA polymerase sigma factor RpoE | 0.36 | Psest_2951 | | C-terminal peptidase (prc) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.69 | PfGW456L13_4516 | | RNA polymerase sigma-H factor AlgT | 0.38 | PfGW456L13_4207 | | Periplasmic protease | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.69 | Pf1N1B4_3323 | | RNA polymerase sigma-H factor AlgT | 0.38 | Pf1N1B4_3741 | | Periplasmic protease | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_17625 | | RNA polymerase subunit sigma | 0.38 | AO353_02440 | | peptidase S41 | 0.34 | 45 |
| Pseudomonas fluorescens FW300-N2E2 | 0.69 | Pf6N2E2_2756 | | RNA polymerase sigma-H factor AlgT | 0.38 | Pf6N2E2_5780 | | Periplasmic protease | 0.40 | 32 |
| Pseudomonas fluorescens SBW25 | 0.69 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | 0.38 | PFLU_RS09980 | | peptidase S41 | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.69 | AO356_04575 | | RNA polymerase subunit sigma | 0.38 | AO356_19335 | | peptidase S41 | 0.36 | 53 |
| Pseudomonas sp. RS175 | 0.69 | PFR28_00690 | | RNA polymerase sigma-H factor | 0.38 | PFR28_03169 | | Tail-specific protease | low | > 88 |
| Pseudomonas simiae WCS417 | 0.69 | PS417_07120 | | RNA polymerase sigma-H factor | 0.38 | PS417_09325 | | peptidase S41 | low | > 88 |
| Escherichia coli ECRC62 | 0.69 | BNILDI_11850 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | BNILDI_15770 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli BL21 | 0.69 | ECD_02467 | | RNA polymerase sigma E factor | 0.34 | ECD_01801 | | carboxy-terminal protease for penicillin-binding protein 3 | — | — |
| Escherichia coli ECRC98 | 0.69 | JDDGAC_25040 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | JDDGAC_01040 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli BW25113 | 0.69 | b2573 | rpoE | RNA polymerase, sigma 24 (sigma E) factor (NCBI) | 0.34 | b1830 | prc | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | — | — |
| Escherichia coli ECRC99 | 0.69 | KEDOAH_06845 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | KEDOAH_01640 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli ECRC102 | 0.69 | NIAGMN_19145 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | NIAGMN_01595 | prc | carboxy terminal-processing peptidase | — | — |
| Pseudomonas putida KT2440 | 0.69 | PP_1427 | | RNA polymerase sigma E factor | 0.38 | PP_1719 | | Tail-specific protease prc | low | > 96 |
| Escherichia fergusonii Becca | 0.69 | EFB2_01323 | | ECF RNA polymerase sigma-E factor | 0.34 | EFB2_02171 | | Tail-specific protease | — | — |
| Escherichia coli ECOR38 | 0.69 | HEPCGN_20520 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | HEPCGN_04865 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli ECOR27 | 0.69 | NOLOHH_13050 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | NOLOHH_16975 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.69 | OHPLBJKB_01134 | | ECF RNA polymerase sigma-E factor | 0.34 | OHPLBJKB_01901 | | Tail-specific protease | — | — |
| Escherichia coli Nissle 1917 | 0.69 | ECOLIN_RS14560 | | RNA polymerase sigma factor RpoE | 0.34 | ECOLIN_RS10190 | | carboxy terminal-processing peptidase | — | — |
| Escherichia coli ECRC101 | 0.69 | MCAODC_11905 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | MCAODC_18940 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli ECRC100 | 0.69 | OKFHMN_21375 | rpoE | RNA polymerase sigma factor RpoE | 0.34 | OKFHMN_26465 | prc | carboxy terminal-processing peptidase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF2107 | | RNA polymerase sigma factor RpoE | 0.34 | GFF2845 | | Tail-specific protease precursor (EC 3.4.21.102) | — | — |
| Enterobacter asburiae PDN3 | 0.68 | EX28DRAFT_0072 | | RNA polymerase sigma factor RpoE | 0.33 | EX28DRAFT_0726 | | C-terminal peptidase (prc) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.37 | Psyr_1599 | | C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A | low | > 86 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_03444 | | ECF RNA polymerase sigma-E factor | 0.33 | MPMX20_02737 | | Tail-specific protease | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.37 | Psyr_1599 | | C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A | low | > 86 |
| Pantoea sp. MT58 | 0.67 | IAI47_04850 | | RNA polymerase sigma factor RpoE | 0.33 | IAI47_08705 | | carboxy terminal-processing peptidase | — | — |
| Rahnella sp. WP5 | 0.67 | EX31_RS21800 | | RNA polymerase sigma factor RpoE | 0.34 | EX31_RS24880 | | carboxy terminal-processing peptidase | — | — |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS15765 | | RNA polymerase sigma factor RpoE | 0.33 | DDA3937_RS11965 | | carboxy terminal-processing peptidase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS05780 | | RNA polymerase sigma factor RpoE | 0.33 | HER17_RS11690 | | carboxy terminal-processing peptidase | — | — |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS15850 | | RNA polymerase sigma factor RpoE | 0.32 | HGI48_RS12055 | | carboxy terminal-processing peptidase | low | > 71 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS16930 | | RNA polymerase sigma factor RpoE | 0.32 | DZA65_RS12505 | | carboxy terminal-processing peptidase | low | > 75 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_19585 | | RNA polymerase sigma factor RpoE | 0.33 | IAI46_10800 | | carboxy terminal-processing peptidase | — | — |
| Klebsiella michiganensis M5al | 0.66 | BWI76_RS21355 | | RNA polymerase sigma factor RpoE | 0.34 | BWI76_RS17975 | | tail-specific protease | — | — |
| Erwinia tracheiphila SCR3 | 0.66 | LU632_RS15425 | rpoE | RNA polymerase sigma factor RpoE | 0.32 | LU632_RS13250 | prc | carboxy terminal-processing peptidase | — | — |
| Shewanella amazonensis SB2B | 0.66 | Sama_0874 | | RNA polymerase sigma factor RpoE (RefSeq) | 0.36 | Sama_1585 | | carboxy-terminal protease (RefSeq) | 0.37 | 60 |
| Rhodanobacter sp. FW510-T8 | 0.65 | OKGIIK_07900 | rpoE | RNA polymerase sigma factor RpoE | 0.37 | OKGIIK_00110 | ctpA | C-terminal processing protease CtpA/Prc, contains a PDZ domain | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.65 | LRK54_RS16940 | | RNA polymerase sigma factor RpoE | 0.37 | LRK54_RS06470 | | carboxy terminal-processing peptidase | 0.88 | 25 |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS16655 | | RNA polymerase sigma factor RpoE | 0.37 | LRK55_RS06215 | | carboxy terminal-processing peptidase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.63 | ABZR86_RS07180 | | RNA polymerase sigma factor RpoE | 0.37 | ABZR86_RS17510 | | carboxy terminal-processing peptidase | 0.41 | 13 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.61 | Xcc-8004.3681.1 | | RNA polymerase sigma factor RpoE | 0.35 | Xcc-8004.914.1 | | tail-specific protease | low | > 74 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.24 | CA264_00665 | | RNA polymerase subunit sigma-24 | 0.23 | CA264_13175 | | tail-specific protease | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.23 | ABZR88_RS01700 | | RNA polymerase sigma factor | 0.36 | ABZR88_RS20305 | | carboxy terminal-processing peptidase | low | > 71 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.23 | CA265_RS15190 | | RNA polymerase sigma factor | 0.32 | CA265_RS19540 | | tail-specific protease | low | > 88 |
Not shown: 31 genomes with orthologs for B158DRAFT_2180 only; 3 genomes with orthologs for B158DRAFT_1732 only