Conservation of cofitness between Atu0516 and Atu3604 in Agrobacterium fabrum C58

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0516 chemotaxis receiver protein 1.0 Atu3604 hypoxanthine phosphoribosyltransferase 0.27 7
Rhizobium sp. OAE497 0.99 ABIE40_RS02870 chemotaxis response regulator CheY1 0.93 ABIE40_RS17550 hypoxanthine phosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.93 SMc03006 chemotaxis regulator protein 0.86 SMc00719 hypoxanthine-guanine phosphoribosyltransferase low > 103
Caulobacter crescentus NA1000 0.71 CCNA_00441 chemotaxis receiver domain protein cheYI 0.26 CCNA_02297 hypoxanthine-guanine phosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.71 CCNA_00441 chemotaxis receiver domain protein cheYI 0.26 CCNA_02297 hypoxanthine-guanine phosphoribosyltransferase 0.64 16
Brevundimonas sp. GW460-12-10-14-LB2 0.63 A4249_RS15560 response regulator 0.23 A4249_RS11415 phosphoribosyltransferase family protein low > 48
Phaeobacter inhibens DSM 17395 0.58 PGA1_262p02130 response regulator receiver 0.34 PGA1_c14710 hypoxanthine-guanine phosphoribosyltransferase Hpt low > 62
Dechlorosoma suillum PS 0.51 Dsui_1707 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.23 Dsui_2699 hypoxanthine-guanine phosphoribosyltransferase low > 51
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_19555 response regulator 0.40 CSW01_03105 hypoxanthine phosphoribosyltransferase low > 62
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_0468 response regulator receiver protein (RefSeq) 0.33 DvMF_0473 hypoxanthine phosphoribosyltransferase (RefSeq) low > 51
Pseudomonas stutzeri RCH2 0.48 Psest_0659 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.23 Psest_1121 Hypoxanthine-guanine phosphoribosyltransferase — —
Shewanella amazonensis SB2B 0.47 Sama_3494 response regulator receiver protein (RefSeq) 0.35 Sama_0771 hypoxanthine phosphoribosyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.47 Shew_0114 response regulator receiver protein (RefSeq) 0.35 Shew_3142 hypoxanthine phosphoribosyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU1593 cheY-1 chemotaxis protein CheY (TIGR) 0.33 DVU1588 hpt hypoxanthine phosphoribosyltransferase (TIGR) low > 55
Shewanella oneidensis MR-1 0.46 SO2318 cheY-2 chemotaxis protein CheY (NCBI ptt file) 0.37 SO3803 hpt-2 hypoxanthine phosphoribosyltransferase (NCBI ptt file) low > 76
Pseudomonas sp. RS175 0.46 PFR28_02510 Chemotaxis protein CheY 0.21 PFR28_03640 Hypoxanthine-guanine phosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS25000 response regulator 0.22 PFLU_RS04490 hypoxanthine-guanine phosphoribosyltransferase low > 109
Shewanella sp. ANA-3 0.45 Shewana3_2219 response regulator receiver protein (RefSeq) 0.36 Shewana3_0793 hypoxanthine phosphoribosyltransferase (RefSeq) low > 73
Pseudomonas fluorescens SBW25 0.45 PFLU_RS25000 response regulator 0.22 PFLU_RS04490 hypoxanthine-guanine phosphoribosyltransferase low > 109
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS19005 chemotaxis protein CheY 0.21 BPHYT_RS17085 hypoxanthine phosphoribosyltransferase low > 109
Bosea sp. OAE506 0.43 ABIE41_RS01705 response regulator 0.57 ABIE41_RS05585 hypoxanthine phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05741 two-component system, chemotaxis family, response regulator CheY 0.22 H281DRAFT_06269 hypoxanthine phosphoribosyltransferase low > 103
Paraburkholderia graminis OAS925 0.41 ABIE53_000126 two-component system chemotaxis response regulator CheY 0.21 ABIE53_003583 hypoxanthine phosphoribosyltransferase low > 113
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3627 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.21 Pf1N1B4_2935 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) low > 87
Pseudomonas simiae WCS417 0.37 PS417_19690 histidine kinase 0.23 PS417_04440 hypoxanthine-guanine phosphoribosyltransferase low > 88
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS20460 response regulator transcription factor 0.23 ABI39_RS08315 hypoxanthine phosphoribosyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS06665 response regulator transcription factor 0.25 HMPREF1058_RS00710 hypoxanthine phosphoribosyltransferase low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1663 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.36 GFF103 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) low > 78
Escherichia coli BW25113 0.34 b1882 cheY chemotaxis regulator transmitting signal to flagellar motor component (NCBI) 0.36 b0125 hpt hypoxanthine phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01846 Chemotaxis protein CheY 0.36 OHPLBJKB_03536 Hypoxanthine phosphoribosyltransferase low > 73
Escherichia coli ECRC100 0.34 OKFHMN_26155 cheY chemotaxis regulatory protein CheY 0.36 OKFHMN_10445 hpt hypoxanthine phosphoribosyltransferase — —
Escherichia coli ECRC99 0.34 KEDOAH_01950 cheY chemotaxis regulatory protein CheY 0.36 KEDOAH_17710 hpt hypoxanthine phosphoribosyltransferase — —
Escherichia coli ECRC101 0.34 MCAODC_19250 cheY chemotaxis regulatory protein CheY 0.36 MCAODC_00960 hpt hypoxanthine phosphoribosyltransferase — —
Escherichia coli ECRC62 0.34 BNILDI_15385 cheY chemotaxis regulatory protein CheY 0.36 BNILDI_08880 hpt hypoxanthine phosphoribosyltransferase low > 75
Escherichia coli ECRC102 0.34 NIAGMN_01905 cheY chemotaxis regulatory protein CheY 0.36 NIAGMN_08295 hpt hypoxanthine phosphoribosyltransferase — —
Escherichia coli BL21 0.34 ECD_01853 chemotaxis regulator transmitting signal to flagellar motor component 0.36 ECD_00124 hypoxanthine phosphoribosyltransferase — —
Escherichia coli ECRC98 0.34 JDDGAC_00730 cheY chemotaxis regulatory protein CheY 0.36 JDDGAC_14040 hpt hypoxanthine phosphoribosyltransferase — —
Escherichia coli ECOR27 0.34 NOLOHH_16595 cheY chemotaxis regulatory protein CheY 0.36 NOLOHH_02790 hpt hypoxanthine phosphoribosyltransferase low > 75
Escherichia coli Nissle 1917 0.34 ECOLIN_RS10750 chemotaxis response regulator CheY 0.36 ECOLIN_RS00695 hypoxanthine phosphoribosyltransferase — —
Escherichia fergusonii Becca 0.34 EFB2_02061 Chemotaxis protein CheY 0.36 EFB2_03920 Hypoxanthine phosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.34 HEPCGN_04575 cheY chemotaxis regulatory protein CheY 0.36 HEPCGN_08425 hpt hypoxanthine phosphoribosyltransferase low > 87
Serratia liquefaciens MT49 0.33 IAI46_16010 chemotaxis response regulator CheY 0.38 IAI46_21275 hypoxanthine phosphoribosyltransferase low > 86
Pantoea sp. MT58 0.33 IAI47_08335 chemotaxis response regulator CheY 0.37 IAI47_15690 hypoxanthine phosphoribosyltransferase low > 76
Rahnella sp. WP5 0.33 EX31_RS11355 chemotaxis protein CheY 0.38 EX31_RS03330 hypoxanthine phosphoribosyltransferase low > 89
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0674 Response regulator receiver domain 0.37 EX28DRAFT_3722 hypoxanthine phosphoribosyltransferase — —
Enterobacter sp. TBS_079 0.33 MPMX20_02786 Chemotaxis protein CheY 0.36 MPMX20_00819 Hypoxanthine phosphoribosyltransferase low > 85
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_3611 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.25 Echvi_0594 hypoxanthine phosphoribosyltransferase low > 79

Not shown: 32 genomes with orthologs for Atu0516 only; 11 genomes with orthologs for Atu3604 only