Conservation of cofitness between Atu3469 and Atu1589 in Agrobacterium fabrum C58

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3469 phosphoglyceromutase 1.0 Atu1589 aminotransferase, class I 0.63 20
Dinoroseobacter shibae DFL-12 0.67 Dshi_0089 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (RefSeq) 0.16 Dshi_0060 aminotransferase class I and II (RefSeq)
Azospirillum brasilense Sp245 0.54 AZOBR_RS04055 phosphoglyceromutase 0.66 AZOBR_RS07830 aminotransferase
Azospirillum sp. SherDot2 0.54 MPMX19_01939 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.65 MPMX19_00804 Glutamate-pyruvate aminotransferase AlaC
Rhodopseudomonas palustris CGA009 0.53 TX73_001765 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.74 TX73_012935 LL-diaminopimelate aminotransferase
Rhodospirillum rubrum S1H 0.52 Rru_A1234 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (NCBI) 0.66 Rru_A2411 Aminotransferase, class I and II (NCBI)
Bosea sp. OAE506 0.51 ABIE41_RS09590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.77 ABIE41_RS19175 LL-diaminopimelate aminotransferase
Magnetospirillum magneticum AMB-1 0.48 AMB_RS01545 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.65 AMB_RS18860 pyridoxal phosphate-dependent aminotransferase
Escherichia coli ECOR38 0.46 HEPCGN_14575 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 HEPCGN_21580 alaC alanine transaminase low > 85
Escherichia coli Nissle 1917 0.46 ECOLIN_RS20615 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 ECOLIN_RS13690 alanine transaminase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF398 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.50 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ low > 78
Escherichia coli BW25113 0.46 b3612 gpmI phosphoglyceromutase (NCBI) 0.49 b2379 yfdZ hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.46 EFB2_00198 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC low > 86
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3863 phosphoglycerate mutase (EC 5.4.2.1) 0.50 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase low > 76
Escherichia coli ECOR27 0.46 NOLOHH_07615 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 NOLOHH_14055 alaC alanine transaminase low > 57
Escherichia coli ECRC101 0.46 OKFHMN_15735 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 OKFHMN_22370 alaC alanine transaminase
Escherichia coli ECRC99 0.46 KEDOAH_12415 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 KEDOAH_05850 alaC alanine transaminase
Escherichia coli BL21 0.46 ECD_03470 phosphoglycero mutase III, cofactor-independent 0.49 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 60
Escherichia coli ECRC101 0.46 MCAODC_06245 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 MCAODC_12900 alaC alanine transaminase
Escherichia coli ECRC102 0.46 NIAGMN_13495 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 NIAGMN_20145 alaC alanine transaminase
Escherichia coli ECRC62 0.46 BNILDI_03900 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 BNILDI_12910 alaC alanine transaminase
Escherichia coli ECRC98 0.46 JDDGAC_19360 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 JDDGAC_26335 alaC alanine transaminase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00087 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC low > 73
Enterobacter sp. TBS_079 0.46 MPMX20_00121 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC low > 85
Klebsiella michiganensis M5al 0.46 BWI76_RS27230 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 BWI76_RS20495 alanine transaminase low > 92
Rahnella sp. WP5 0.45 EX31_RS14360 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 EX31_RS20015 alanine transaminase low > 89
Pseudomonas simiae WCS417 0.44 PS417_01605 phosphoglycerate mutase 0.50 PS417_21975 glutamate-pyruvate aminotransferase low > 88
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_353 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.50 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ
Pseudomonas putida KT2440 0.44 PP_5056 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 PP_0817 aminotransferase
Pseudomonas fluorescens SBW25 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 PFLU_RS23580 alanine transaminase
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 PFLU_RS23580 alanine transaminase
Serratia liquefaciens MT49 0.44 IAI46_24710 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 IAI46_18180 alanine transaminase low > 86
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_12115 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 AO353_03235 glutamate-pyruvate aminotransferase low > 101
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_4885 phosphoglycerate mutase 0.50 Psyr_0468 Aminotransferase, class I and II
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_09770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 AO356_05050 glutamate-pyruvate aminotransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_4885 phosphoglycerate mutase 0.50 Psyr_0468 Aminotransferase, class I and II
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1617 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.50 Pf1N1B4_555 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas sp. S08-1 0.43 OH686_14655 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 0.49 OH686_04000 Glutamate-pyruvate aminotransferase AlaC
Pseudomonas sp. RS175 0.43 PFR28_04938 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 PFR28_00596 Glutamate-pyruvate aminotransferase AlaC
Pseudomonas stutzeri RCH2 0.42 Psest_0162 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.15 Psest_1470 succinyldiaminopimelate transaminase
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3832 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.50 Pf6N2E2_2862 Uncharacterized PLP-dependent aminotransferase YfdZ
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0844 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.26 Echvi_0124 Aspartate/tyrosine/aromatic aminotransferase
Acinetobacter radioresistens SK82 0.42 MPMX26_00160 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.19 MPMX26_01868 LL-diaminopimelate aminotransferase
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16950 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.19 CA264_01550 aminotransferase
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_0469 yibO phosphoglyceromutase 0.34 Synpcc7942_1794 succinyldiaminopimelate transaminase
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS02685 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.28 HMPREF1181_RS06565 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Bacteroides thetaiotaomicron VPI-5482 0.39 BT3419 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (NCBI ptt file) 0.26 BT3935 aminotransferase (NCBI ptt file)
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS04580 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.29 HMPREF1078_RS01130 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Phocaeicola dorei CL03T12C01 0.38 ABI39_RS04505 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.30 ABI39_RS10505 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 72
Phocaeicola vulgatus CL09T03C04 0.38 HMPREF1058_RS12285 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.30 HMPREF1058_RS14790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Bacteroides ovatus ATCC 8483 0.38 BACOVA_01888 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.27 BACOVA_01161 aminotransferase, class I/II
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU1619 gpmA phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TIGR) 0.52 DVU0891 aminotransferase, classes I and II (TIGR)
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_0439 phosphoglyceromutase (RefSeq) 0.53 DvMF_1411 aminotransferase class I and II (RefSeq)
Dechlorosoma suillum PS 0.28 Dsui_2175 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.51 Dsui_2909 aspartate/tyrosine/aromatic aminotransferase

Not shown: 11 genomes with orthologs for Atu3469 only; 28 genomes with orthologs for Atu1589 only