Conservation of cofitness between Atu1515 and Atu0602 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1515 hypothetical protein 1.0 Atu0602 glutamine synthetase 0.23 5
Rhizobium sp. OAE497 0.72 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA 0.84 ABIE40_RS03210 glutamine synthetase family protein low > 107
Sinorhizobium meliloti 1021 0.60 SMc04235 tRNA-dihydrouridine synthase A 0.81 SMc00762 glutamine synthetase low > 103
Caulobacter crescentus NA1000 0.56 CCNA_01364 NIFR3-like protein 0.55 CCNA_03230 glutamine synthetase low > 66
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01364 NIFR3-like protein 0.55 CCNA_03230 glutamine synthetase low > 67
Shewanella sp. ANA-3 0.54 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) 0.47 Shewana3_3098 L-glutamine synthetase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO3912 TIM-barrel protein, yjbN family (NCBI ptt file) 0.47 SO1268 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) low > 76
Shewanella loihica PV-4 0.53 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) 0.47 Shew_0972 glutamate--ammonia ligase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.53 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) 0.46 Sama_2644 glutamate--ammonia ligase (RefSeq) low > 62
Azospirillum brasilense Sp245 0.52 AZOBR_RS15935 tRNA-dihydrouridine synthase A 0.49 AZOBR_RS08850 glutamine synthetase low > 97
Phaeobacter inhibens DSM 17395 0.52 PGA1_c19230 tRNA-dihydrouridine synthase A 0.46 PGA1_c11520 gamma-glutamylputrescine synthetase PuuA low > 62
Azospirillum sp. SherDot2 0.51 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase 0.50 MPMX19_04886 Gamma-glutamylputrescine synthetase PuuA low > 112
Dinoroseobacter shibae DFL-12 0.51 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) 0.45 Dshi_2226 Glutamate--putrescine ligase (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.51 TX73_010150 tRNA dihydrouridine(20/20a) synthase DusA 0.21 TX73_007190 glutamine synthetase family protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.49 Psyr_4867 L-glutamine synthetase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.5010.1 tRNA dihydrouridine synthase A 0.48 Xcc-8004.2204.1 glutamine synthetase family protein low > 74
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.49 Psyr_4867 L-glutamine synthetase low > 86
Pseudomonas putida KT2440 0.46 PP_2169 tRNA-dihydrouridine synthase A 0.49 PP_5183 glutamylpolyamine synthetase low > 96
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2257 tRNA dihydrouridine synthase A 0.48 Pf6N2E2_4511 glutamine synthetase family protein low > 103
Pseudomonas simiae WCS417 0.46 PS417_07740 tRNA-dihydrouridine synthase A 0.48 PS417_27135 glutamine synthetase low > 88
Pseudomonas fluorescens SBW25 0.46 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.48 PFLU_RS28785 glutamine synthetase low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.48 PFLU_RS28785 glutamine synthetase low > 109
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_02170 tRNA-dihydrouridine synthase A 0.48 AO356_13145 glutamine synthetase low > 104
Pseudomonas stutzeri RCH2 0.45 Psest_2706 tRNA dihydrouridine synthase A 0.48 Psest_4286 Glutamine synthetase low > 67
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA 0.51 QEN71_RS12935 glutamine synthetase family protein low > 153
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS08700 tRNA-dihydrouridine synthase A 0.50 BPHYT_RS23160 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) low > 109
Pseudomonas sp. RS175 0.44 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase 0.48 PFR28_04297 Gamma-glutamylputrescine synthetase PuuA 0.28 57
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_57 tRNA dihydrouridine synthase A 0.48 Pf1N1B4_2256 glutamine synthetase family protein low > 87
Pseudomonas sp. S08-1 0.44 OH686_22745 tRNA-dihydrouridine(20/20a) synthase 0.48 OH686_11475 glutamine synthetase family protein low > 80
Rhodospirillum rubrum S1H 0.44 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) 0.51 Rru_A2079 Glutamate--ammonia ligase (NCBI) low > 58
Paraburkholderia graminis OAS925 0.44 ABIE53_001975 tRNA-dihydrouridine synthase A 0.51 ABIE53_002230 glutamine synthetase low > 113
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_00295 tRNA-dihydrouridine synthase A 0.48 AO353_08590 glutamine synthetase low > 101
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase 0.50 H281DRAFT_01081 L-glutamine synthetase low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4791 tRNA dihydrouridine synthase A 0.49 GFF2037 glutamine synthetase family protein low > 90
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_3987 tRNA dihydrouridine synthase A 0.49 PfGW456L13_926 glutamine synthetase family protein low > 87

Not shown: 49 genomes with orthologs for Atu1515 only; 0 genomes with orthologs for Atu0602 only