Conservation of cofitness between Atu3469 and Atu0432 in Agrobacterium fabrum C58

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3469 phosphoglyceromutase 1.0 Atu0432 O-succinylhomoserine sulfhydrylase 0.65 11
Phaeobacter inhibens DSM 17395 0.68 PGA1_c02770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI 0.58 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ
Dinoroseobacter shibae DFL-12 0.67 Dshi_0089 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (RefSeq) 0.56 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq)
Azospirillum brasilense Sp245 0.54 AZOBR_RS04055 phosphoglyceromutase 0.54 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase
Azospirillum sp. SherDot2 0.54 MPMX19_01939 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.52 MPMX19_01364 O-succinylhomoserine sulfhydrylase low > 112
Rhodopseudomonas palustris CGA009 0.53 TX73_001765 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.65 TX73_024775 O-succinylhomoserine sulfhydrylase
Rhodospirillum rubrum S1H 0.52 Rru_A1234 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (NCBI) 0.50 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI)
Bosea sp. OAE506 0.51 ABIE41_RS09590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.64 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase
Magnetospirillum magneticum AMB-1 0.48 AMB_RS01545 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.58 AMB_RS21365 O-succinylhomoserine sulfhydrylase
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0706 phosphoglycerate mutase (EC 5.4.2.1) 0.36 B158DRAFT_1522 methionine gamma-lyase
Enterobacter sp. TBS_079 0.46 MPMX20_00121 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.26 MPMX20_04531 Cystathionine gamma-synthase low > 85
Klebsiella michiganensis M5al 0.46 BWI76_RS27230 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.27 BWI76_RS16730 cystathionine gamma-lyase low > 92
Shewanella amazonensis SB2B 0.45 Sama_0060 phosphoglyceromutase (RefSeq) 0.37 Sama_1242 methionine gamma-lyase (RefSeq)
Rahnella sp. WP5 0.45 EX31_RS14360 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.35 EX31_RS04985 PLP-dependent transferase low > 89
Shewanella loihica PV-4 0.45 Shew_3806 phosphoglyceromutase (RefSeq) 0.37 Shew_2491 methionine gamma-lyase (RefSeq)
Shewanella sp. ANA-3 0.44 Shewana3_0051 phosphoglyceromutase (RefSeq) 0.38 Shewana3_2643 methionine gamma-lyase (RefSeq)
Shewanella oneidensis MR-1 0.44 SO0049 gpmA phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (NCBI ptt file) 0.38 SO1812 mdeA Methionine gamma-lyase (EC 4.4.1.11) (from data)
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_353 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.42 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Pseudomonas simiae WCS417 0.44 PS417_01605 phosphoglycerate mutase 0.42 PS417_18530 O-succinylhomoserine sulfhydrylase 0.43 30
Marinobacter adhaerens HP15 0.44 HP15_3005 phosphoglyceromutase 0.38 HP15_1820 methionine gamma-lyase
Pseudomonas fluorescens SBW25 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.43 PFLU_RS20510 O-succinylhomoserine sulfhydrylase
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.43 PFLU_RS20510 O-succinylhomoserine sulfhydrylase
Pseudomonas putida KT2440 0.44 PP_5056 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.43 PP_2001 O-succinylhomoserine sulfhydrylase
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_12115 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.43 AO353_20695 O-succinylhomoserine sulfhydrylase 0.44 51
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_09770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 AO356_21470 O-succinylhomoserine sulfhydrylase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_4885 phosphoglycerate mutase 0.44 Psyr_1669 O-succinylhomoserine sulfhydrylase
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_4885 phosphoglycerate mutase 0.44 Psyr_1669 O-succinylhomoserine sulfhydrylase
Pseudomonas sp. S08-1 0.43 OH686_14655 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 0.42 OH686_04415 O-succinylhomoserine sulfhydrylase
Pseudomonas sp. RS175 0.43 PFR28_04938 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 PFR28_02810 O-succinylhomoserine sulfhydrylase
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_01740 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.26 CSW01_13550 O-succinylhomoserine (thiol)-lyase
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3832 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.42 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Pseudomonas stutzeri RCH2 0.42 Psest_0162 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.43 Psest_2578 O-succinylhomoserine sulfhydrylase
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0844 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases
Acinetobacter radioresistens SK82 0.42 MPMX26_00160 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.45 MPMX26_01645 O-succinylhomoserine sulfhydrylase
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16950 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 CA264_02530 O-succinylhomoserine sulfhydrylase
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS14540 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 0.43 CA265_RS13080 O-succinylhomoserine sulfhydrylase
Dechlorosoma suillum PS 0.28 Dsui_2175 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.44 Dsui_3185 O-succinylhomoserine sulfhydrylase

Not shown: 28 genomes with orthologs for Atu3469 only; 17 genomes with orthologs for Atu0432 only