Conservation of cofitness between Atu1688 and Atu0432 in Agrobacterium fabrum C58

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu0432 O-succinylhomoserine sulfhydrylase 0.87 8
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.89 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.89 SMc02217 O-succinylhomoserine sulfhydrylase 0.72 54
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.44 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.44 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.65 TX73_024775 O-succinylhomoserine sulfhydrylase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.64 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.58 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.52 MPMX19_01364 O-succinylhomoserine sulfhydrylase 0.69 32
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.57 CCNA_02321 O-succinylhomoserine sulfhydrylase 0.84 47
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.57 CCNA_02321 O-succinylhomoserine sulfhydrylase low > 67
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.56 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.54 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase 0.89 11
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.52 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) 0.87 56
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.58 AMB_RS21365 O-succinylhomoserine sulfhydrylase — —
Marinobacter adhaerens HP15 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.38 HP15_1820 methionine gamma-lyase 0.74 17
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.42 RR42_RS14320 O-succinylhomoserine sulfhydrylase 0.24 121
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.50 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) 0.84 24
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.42 PS417_18530 O-succinylhomoserine sulfhydrylase 0.81 10
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.43 PFLU_RS20510 O-succinylhomoserine sulfhydrylase 0.78 3
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.43 PFLU_RS20510 O-succinylhomoserine sulfhydrylase 0.83 13
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.43 AO353_20695 O-succinylhomoserine sulfhydrylase 0.90 13
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.42 OH686_04415 O-succinylhomoserine sulfhydrylase 0.83 16
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.43 Psest_2578 O-succinylhomoserine sulfhydrylase 0.81 8
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.42 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.86 12
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.42 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.86 14
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.41 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.42 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.94 10
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.42 AO356_21470 O-succinylhomoserine sulfhydrylase 0.93 9
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.42 PFR28_02810 O-succinylhomoserine sulfhydrylase — —
Dechlorosoma suillum PS 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase 0.44 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.40 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Pseudomonas putida KT2440 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.43 PP_2001 O-succinylhomoserine sulfhydrylase 0.90 7
Acinetobacter radioresistens SK82 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.45 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.93 24
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.44 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.42 ABIE53_004817 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.43 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase 0.78 5
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.43 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase 0.84 10
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.43 CA265_RS13080 O-succinylhomoserine sulfhydrylase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2508 Indole-3-glycerol phosphate synthase 0.42 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases — —
Mycobacterium tuberculosis H37Rv 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.50 Rv0391 Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase) — —

Not shown: 27 genomes with orthologs for Atu1688 only; 13 genomes with orthologs for Atu0432 only