Conservation of cofitness between Atu1130 and Atu0269 in Agrobacterium fabrum C58

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1130 dehydrogenase 1.0 Atu0269 exodeoxyribonuclease VII large subunit 0.25 14
Rhizobium sp. OAE497 0.65 ABIE40_RS06505 SDR family oxidoreductase 0.77 ABIE40_RS01205 exodeoxyribonuclease VII large subunit low > 107
Sinorhizobium meliloti 1021 0.62 SMc00603 short chain dehydrogenase 0.70 SMc00378 exodeoxyribonuclease VII large subunit low > 103
Rhodospirillum rubrum S1H 0.48 Rru_A2218 Short-chain dehydrogenase/reductase SDR (NCBI) 0.42 Rru_A0159 Exodeoxyribonuclease VII (NCBI) — —
Azospirillum sp. SherDot2 0.45 MPMX19_01069 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.43 MPMX19_01631 Exodeoxyribonuclease 7 large subunit low > 112
Bosea sp. OAE506 0.44 ABIE41_RS11470 SDR family oxidoreductase 0.42 ABIE41_RS23155 exodeoxyribonuclease VII large subunit low > 77
Caulobacter crescentus NA1000 0.43 CCNA_00422 SDR pteridine reductase 0.39 CCNA_02329 exodeoxyribonuclease VII large subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_00422 SDR pteridine reductase 0.39 CCNA_02329 exodeoxyribonuclease VII large subunit low > 67
Dinoroseobacter shibae DFL-12 0.41 Dshi_0643 short-chain dehydrogenase/reductase SDR (RefSeq) 0.41 Dshi_2727 exodeoxyribonuclease VII, large subunit (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS01695 SDR family oxidoreductase 0.36 A4249_RS09265 exodeoxyribonuclease VII large subunit — —
Phaeobacter inhibens DSM 17395 0.38 PGA1_c02870 short chain dehydrogenase 0.41 PGA1_c23600 exodeoxyribonuclease 7 large subunit low > 62
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS01435 short-chain dehydrogenase 0.20 RR42_RS03475 exodeoxyribonuclease VII large subunit low > 128
Ralstonia solanacearum GMI1000 0.32 RS_RS00770 short chain dehydrogenase 0.21 RS_RS12670 exodeoxyribonuclease VII large subunit low > 80
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS10155 short chain dehydrogenase 0.20 RALBFv3_RS05060 exodeoxyribonuclease VII large subunit low > 76
Ralstonia solanacearum UW163 0.31 UW163_RS03425 short chain dehydrogenase 0.20 UW163_RS08565 exodeoxyribonuclease VII large subunit — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS05645 SDR family oxidoreductase 0.19 ABZR87_RS00710 exodeoxyribonuclease VII large subunit 0.60 34
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS22000 short-chain dehydrogenase 0.23 HSERO_RS05850 exodeoxyribonuclease VII large subunit low > 78
Paraburkholderia graminis OAS925 0.30 ABIE53_000038 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) 0.21 ABIE53_003344 exodeoxyribonuclease VII large subunit low > 113
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_05822 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 0.21 H281DRAFT_04109 Exodeoxyribonuclease VII large subunit low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF1630 FolM Alternative dihydrofolate reductase 1 0.24 GFF4511 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 90
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS18580 short-chain dehydrogenase 0.21 BPHYT_RS15865 exodeoxyribonuclease VII large subunit low > 109
Ralstonia solanacearum PSI07 0.28 RPSI07_RS23190 short chain dehydrogenase 0.20 RPSI07_RS12235 exodeoxyribonuclease VII large subunit low > 81
Variovorax sp. OAS795 0.27 ABID97_RS06515 SDR family oxidoreductase 0.22 ABID97_RS16945 exodeoxyribonuclease VII large subunit low > 91
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS28605 SDR family oxidoreductase 0.21 QEN71_RS02835 exodeoxyribonuclease VII large subunit low > 153
Variovorax sp. SCN45 0.27 GFF7306 FolM Alternative dihydrofolate reductase 1 0.22 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 127
Acidovorax sp. GW101-3H11 0.27 Ac3H11_2735 FolM Alternative dihydrofolate reductase 1 0.21 Ac3H11_2382 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 79
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.934.1 FolM Alternative dihydrofolate reductase 1 0.23 Xcc-8004.2251.1 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 74
Alteromonas macleodii MIT1002 0.23 MIT1002_01601 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.20 MIT1002_02780 Exodeoxyribonuclease 7 large subunit low > 70
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_0830 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.24 B158DRAFT_1157 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 40
Dechlorosoma suillum PS 0.22 Dsui_0694 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 0.21 Dsui_3268 exodeoxyribonuclease VII, large subunit low > 51
Marinobacter adhaerens HP15 0.21 HP15_2995 short-chain dehydrogenase/reductase SDR 0.25 HP15_2052 exodeoxyribonuclease VII large subunit low > 73
Shewanella loihica PV-4 0.20 Shew_2034 short-chain dehydrogenase/reductase SDR (RefSeq) 0.23 Shew_1296 xseA exodeoxyribonuclease VII large subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.20 Sama_1764 short-chain dehydrogenase/reductase SDR (RefSeq) 0.22 Sama_2360 xseA exodeoxyribonuclease VII large subunit (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_1021 Short-chain dehydrogenase/reductase SDR 0.21 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_1021 Short-chain dehydrogenase/reductase SDR 0.21 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Pectobacterium carotovorum WPP14 0.16 HER17_RS09720 dihydromonapterin reductase 0.23 HER17_RS06150 exodeoxyribonuclease VII large subunit 0.63 28
Escherichia coli ECRC62 0.16 BNILDI_16970 folM dihydromonapterin reductase 0.23 BNILDI_12205 xseA exodeoxyribonuclease VII large subunit — —
Escherichia coli ECOR27 0.16 NOLOHH_18180 folM dihydromonapterin reductase 0.23 NOLOHH_13405 xseA exodeoxyribonuclease VII large subunit — —
Pseudomonas fluorescens SBW25 0.16 PFLU_RS25305 dihydromonapterin reductase 0.22 PFLU_RS24755 exodeoxyribonuclease VII large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS25305 dihydromonapterin reductase 0.22 PFLU_RS24755 exodeoxyribonuclease VII large subunit low > 109
Escherichia coli BL21 0.16 ECD_01575 dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme 0.23 ECD_02401 exonuclease VII, large subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_02120 Dihydromonapterin reductase 0.23 OHPLBJKB_01200 Exodeoxyribonuclease 7 large subunit low > 73
Escherichia coli BW25113 0.16 b1606 folM short chain dehydrogenase (NCBI) 0.23 b2509 xseA exodeoxyribonuclease VII large subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.16 EFB2_02386 Dihydromonapterin reductase 0.22 EFB2_01384 Exodeoxyribonuclease 7 large subunit low > 86
Escherichia coli Nissle 1917 0.16 ECOLIN_RS08970 dihydromonapterin reductase 0.22 ECOLIN_RS14245 exodeoxyribonuclease VII large subunit — —
Pseudomonas sp. S08-1 0.15 OH686_18770 FolM Alternative dihydrofolate reductase 1 0.22 OH686_17580 exodeoxyribonuclease VII, large subunit low > 80

Not shown: 10 genomes with orthologs for Atu1130 only; 26 genomes with orthologs for Atu0269 only