Conservation of cofitness between AO353_14090 and AO353_20865 in Pseudomonas fluorescens FW300-N2E3

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_14090 alkylphosphonate utilization protein 1.0 AO353_20865 cold-shock protein 0.30 13
Pseudomonas fluorescens SBW25 0.98 PFLU_RS25385 alkylphosphonate utilization protein 0.97 PFLU_RS20330 cold-shock protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS25385 alkylphosphonate utilization protein 0.97 PFLU_RS20330 cold-shock protein low > 109
Pseudomonas simiae WCS417 0.98 PS417_23570 hypothetical protein 0.97 PS417_18355 DNA-binding protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA 1.00 Pf1N1B4_6025 Cold shock protein CspG — —
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA 1.00 PfGW456L13_3902 Cold shock protein CspG — —
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15790 alkylphosphonate utilization protein 1.00 AO356_00920 cold-shock protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA 1.00 Pf6N2E2_171 Cold shock protein CspG — —
Pseudomonas putida KT2440 0.93 PP_0686 conserved protein of unknown function 0.96 PP_2463 nucleic acid cold-shock chaperone — —
Pseudomonas sp. RS175 0.88 PFR28_03774 hypothetical protein 0.99 PFR28_02727 Cold shock protein CapB low > 88
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0863 PhnA protein 0.90 Psyr_2160 cold-shock DNA-binding protein family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0863 PhnA protein 0.90 Psyr_2160 cold-shock DNA-binding protein family — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS06075 hypothetical protein 0.64 RPSI07_RS00010 cold-shock protein — —
Ralstonia solanacearum GMI1000 0.77 RS_RS23785 hypothetical protein 0.64 RS_RS17205 cold-shock protein low > 80
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS17545 alkylphosphonate utilization protein 0.63 RALBFv3_RS23260 cold-shock protein — —
Ralstonia solanacearum UW163 0.76 UW163_RS21605 alkylphosphonate utilization protein 0.63 UW163_RS16510 cold-shock protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1466 Alkylphosphonate utilization operon protein PhnA 0.61 GFF454 Cold shock protein CspA low > 78
Escherichia coli ECRC99 0.70 KEDOAH_15560 yjdM Protein YjdM 0.61 KEDOAH_12145 cspA Major cold shock protein — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM 0.61 ECOLIN_RS20345 RNA chaperone/antiterminator CspA low > 55
Escherichia coli BL21 0.70 ECD_03979 zinc-ribbon family protein 0.61 ECD_03406 RNA chaperone and antiterminator, cold-inducible — —
Escherichia coli ECRC101 0.70 MCAODC_03115 yjdM Protein YjdM 0.61 MCAODC_06520 cspA Major cold shock protein low > 87
Escherichia coli ECRC98 0.70 JDDGAC_16240 yjdM Protein YjdM 0.61 JDDGAC_19635 cspA Major cold shock protein low > 86
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA 0.65 EX28DRAFT_2409 Cold shock proteins — —
Escherichia coli BW25113 0.70 b4108 phnA hypothetical protein (NCBI) 0.61 b3556 cspA major cold shock protein (NCBI) — —
Escherichia coli ECRC62 0.70 BNILDI_06620 yjdM Protein YjdM 0.61 BNILDI_03595 cspA Major cold shock protein low > 75
Escherichia coli ECRC100 0.70 OKFHMN_12605 yjdM Protein YjdM 0.61 OKFHMN_16005 cspA Major cold shock protein — —
Escherichia coli ECOR27 0.70 NOLOHH_04870 yjdM Protein YjdM 0.61 NOLOHH_07950 cspA Major cold shock protein low > 75
Escherichia coli ECRC102 0.70 NIAGMN_10450 yjdM Protein YjdM 0.61 NIAGMN_13765 cspA Major cold shock protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03937 hypothetical protein 0.61 OHPLBJKB_00150 Cold shock protein CspA low > 73
Escherichia fergusonii Becca 0.70 EFB2_04475 hypothetical protein 0.61 EFB2_00251 Cold shock protein CspA low > 86
Escherichia coli ECOR38 0.70 HEPCGN_11240 yjdM Protein YjdM 0.61 HEPCGN_14895 cspA Major cold shock protein low > 87
Enterobacter sp. TBS_079 0.70 MPMX20_00327 hypothetical protein 0.66 MPMX20_02529 Cold shock protein CspA low > 85
Klebsiella michiganensis M5al 0.69 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA 0.63 BWI76_RS10395 cold-shock protein low > 92
Rahnella sp. WP5 0.65 EX31_RS19010 alkylphosphonate utilization protein 0.58 EX31_RS20670 RNA chaperone/antiterminator CspA low > 89
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS13640 hypothetical protein 0.64 HSERO_RS15195 cold-shock protein — —
Erwinia tracheiphila SCR3 0.64 LU632_RS22225 alkylphosphonate utilization protein 0.63 LU632_RS19015 cspA RNA chaperone/antiterminator CspA low > 74
Shewanella loihica PV-4 0.63 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) 0.65 Shew_1165 cold-shock DNA-binding domain-containing protein (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.61 AMB_RS18885 hypothetical protein 0.46 AMB_RS08040 cold-shock protein low > 64
Pantoea sp. MT58 0.61 IAI47_04280 alkylphosphonate utilization protein 0.60 IAI47_20360 RNA chaperone/antiterminator CspA — —
Rhodospirillum rubrum S1H 0.55 Rru_A1476 PhnA protein (NCBI) 0.51 Rru_A1914 Cold-shock DNA-binding domain protein (NCBI) low > 58
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS12375 zinc ribbon domain-containing protein YjdM 0.64 ABZR87_RS19675 cold-shock protein low > 80
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS24510 alkylphosphonate utilization protein 0.65 BPHYT_RS33480 cold-shock protein — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS12350 alkylphosphonate utilization protein 0.66 RR42_RS37535 cold-shock protein — —
Alteromonas macleodii MIT1002 0.50 MIT1002_00555 putative alkylphosphonate utilization operon protein PhnA 0.71 MIT1002_01248 Cold shock-like protein CspG low > 70
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_05381 phosphonoacetate hydrolase 0.64 H281DRAFT_01154 cold-shock DNA-binding protein family — —
Dechlorosoma suillum PS 0.46 Dsui_0559 alkylphosphonate utilization operon protein PhnA 0.67 Dsui_2659 cold shock protein low > 51
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_1949 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 0.49 Ga0059261_3800 Cold shock proteins — —

Not shown: 22 genomes with orthologs for AO353_14090 only; 11 genomes with orthologs for AO353_20865 only