| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_26720 | | LysR family transcriptional regulator | 1.0 | AO353_19100 | | LysR family transcriptional regulator | 0.30 | 11 |
| Burkholderia phytofirmans PsJN | 0.73 | BPHYT_RS27430 | | LysR family transcriptional regulator | 0.32 | BPHYT_RS23955 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_07220 | | LysR family transcriptional regulator | 0.70 | PS417_08510 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS07335 | | LysR family transcriptional regulator | 0.71 | PFLU_RS08460 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS07335 | | LysR family transcriptional regulator | 0.71 | PFLU_RS08460 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.69 | Psyr_3165 | | transcriptional regulator, LysR family | 0.77 | Psyr_3624 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.69 | Psyr_3165 | | transcriptional regulator, LysR family | 0.77 | Psyr_3624 | | transcriptional regulator, LysR family | low | > 86 |
| Paraburkholderia graminis OAS925 | 0.68 | ABIE53_005445 | | DNA-binding transcriptional LysR family regulator | 0.33 | ABIE53_006542 | | DNA-binding transcriptional LysR family regulator | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.67 | ABZR87_RS08345 | | LysR family transcriptional regulator | 0.28 | ABZR87_RS04750 | | LysR substrate-binding domain-containing protein | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.66 | H281DRAFT_03335 | | transcriptional regulator, LysR family | 0.33 | H281DRAFT_05286 | | transcriptional regulator, LysR family | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.66 | QEN71_RS11315 | | LysR family transcriptional regulator | 0.32 | QEN71_RS07685 | | LysR family transcriptional regulator | low | > 153 |
| Pantoea sp. MT58 | 0.59 | IAI47_10140 | | LysR family transcriptional regulator | 0.28 | IAI47_06355 | | transcriptional regulator LrhA | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.59 | Ac3H11_4371 | | LysR family transcriptional regulator YbhD | 0.26 | Ac3H11_2888 | | Transcriptional regulator, LysR family | low | > 79 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_0581 | | Transcriptional regulator | 0.26 | EX28DRAFT_0320 | | Transcriptional regulator | low | > 76 |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_02971 | | HTH-type transcriptional regulator CynR | 0.26 | MPMX20_03219 | | HTH-type transcriptional regulator HdfR | low | > 85 |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS28580 | | LysR family transcriptional regulator | 0.30 | RR42_RS30590 | | LysR family transcriptional regulator | low | > 128 |
| Pseudomonas putida KT2440 | 0.51 | PP_2054 | | putative DNA-binding transcriptional regulator | 0.77 | PP_1863 | | Transcriptional regulator, LysR family | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_4462 | | LysR family transcriptional regulator YbhD | 0.89 | Pf1N1B4_272 | | Transcriptional regulator, LysR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_28895 | | LysR family transcriptional regulator | 0.88 | AO356_03135 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_01942 | | HTH-type transcriptional regulator CynR | 0.84 | PFR28_00975 | | HTH-type transcriptional regulator HdfR | low | > 88 |
| Azospirillum brasilense Sp245 | 0.47 | AZOBR_RS28100 | | LysR family transcriptional regulator | 0.36 | AZOBR_RS00870 | | LysR family transcriptional regulator | low | > 97 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS07805 | | LysR family transcriptional regulator | 0.26 | DDA3937_RS14340 | | transcriptional regulator LrhA | low | > 74 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_03557 | | HTH-type transcriptional regulator CynR | 0.35 | MPMX19_00088 | | HTH-type transcriptional regulator HdfR | low | > 112 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF2179 | | LysR family transcriptional regulator YbhD | 0.30 | GFF5537 | | Transcriptional regulator, LysR family | low | > 90 |
| Agrobacterium fabrum C58 | 0.43 | Atu4264 | | LysR family transcriptional regulator | 0.36 | Atu0654 | | transcriptional regulator, LysR family | low | > 89 |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS04365 | | LysR family transcriptional regulator | 0.23 | BWI76_RS20200 | | transcriptional regulator LrhA | low | > 92 |
| Escherichia coli ECOR27 | 0.40 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | NOLOHH_14450 | lrhA | transcriptional regulator LrhA | low | > 75 |
| Escherichia coli ECRC62 | 0.40 | BNILDI_21095 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | BNILDI_13370 | lrhA | transcriptional regulator LrhA | low | > 75 |
| Escherichia coli Nissle 1917 | 0.40 | ECOLIN_RS04090 | | LysR family transcriptional regulator | 0.24 | ECOLIN_RS13290 | | transcriptional regulator LrhA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_02945 | | Hydrogen peroxide-inducible genes activator | 0.25 | OHPLBJKB_01416 | | HTH-type transcriptional regulator HdfR | low | > 73 |
| Escherichia coli ECRC101 | 0.40 | MCAODC_25890 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | MCAODC_13870 | lrhA | transcriptional regulator LrhA | low | > 87 |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_04720 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | NIAGMN_20600 | lrhA | transcriptional regulator LrhA | — | — |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_10325 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | JDDGAC_26795 | lrhA | transcriptional regulator LrhA | low | > 86 |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_21295 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | KEDOAH_05365 | lrhA | transcriptional regulator LrhA | — | — |
| Escherichia coli ECRC100 | 0.40 | OKFHMN_06670 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | OKFHMN_22830 | lrhA | transcriptional regulator LrhA | low | > 80 |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_01605 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.25 | HEPCGN_22035 | lrhA | transcriptional regulator LrhA | low | > 87 |
| Escherichia coli BW25113 | 0.40 | b0768 | ybhD | predicted DNA-binding transcriptional regulator (RefSeq) | 0.25 | b2289 | lrhA | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.40 | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | 0.25 | EFB2_01569 | | HTH-type transcriptional regulator HdfR | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS07340 | | LysR family transcriptional regulator | 0.28 | HSERO_RS17670 | | LysR family transcriptional regulator | low | > 78 |
| Variovorax sp. SCN45 | 0.32 | GFF2416 | | Transcriptional regulator YbhD, LysR family | 0.31 | GFF5707 | | Transcriptional regulator, LysR family | low | > 127 |
| Bosea sp. OAE506 | 0.32 | ABIE41_RS16550 | | LysR family transcriptional regulator | 0.39 | ABIE41_RS23080 | | LysR substrate-binding domain-containing protein | low | > 77 |
| Ralstonia solanacearum IBSBF1503 | 0.28 | RALBFv3_RS05100 | | LysR family transcriptional regulator | 0.28 | RALBFv3_RS16915 | | LysR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.28 | UW163_RS08525 | | LysR family transcriptional regulator | 0.28 | UW163_RS18270 | | LysR family transcriptional regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.28 | RS_RS12720 | | LysR family transcriptional regulator | 0.31 | RS_RS03085 | | LysR family transcriptional regulator | low | > 80 |
| Rahnella sp. WP5 | 0.27 | EX31_RS20145 | | LysR family transcriptional regulator | 0.27 | EX31_RS19440 | | transcriptional regulator LrhA | low | > 89 |
| Serratia liquefaciens MT49 | 0.27 | IAI46_18415 | | LysR family transcriptional regulator | 0.27 | IAI46_17715 | | transcriptional regulator LrhA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.27 | GFF2038 | | LysR family transcriptional regulator YfeR | 0.27 | GFF1893 | | LysR family transcriptional regulator lrhA | low | > 78 |
| Dickeya dianthicola 67-19 | 0.25 | HGI48_RS00115 | | LysR family transcriptional regulator | 0.25 | HGI48_RS14315 | | transcriptional regulator LrhA | 0.34 | 60 |
| Dickeya dianthicola ME23 | 0.25 | DZA65_RS00130 | | LysR family transcriptional regulator | 0.25 | DZA65_RS14990 | | transcriptional regulator LrhA | low | > 75 |
| Escherichia coli BL21 | 0.22 | ECD_02308 | | transcriptional regulator of yefH | 0.25 | ECD_02214 | | transcriptional repressor of flagellar, motility and chemotaxis genes | low | > 61 |
| Phaeobacter inhibens DSM 17395 | 0.18 | PGA1_262p01470 | | transcriptional regulator, LysR family | 0.23 | PGA1_c21890 | | transcriptional regulator, LysR family | low | > 62 |
| Marinobacter adhaerens HP15 | 0.18 | HP15_4145 | | transcriptional regulator, LysR family | 0.32 | HP15_2775 | | transcriptional regulator protein, LysR family | low | > 73 |
Not shown: 2 genomes with orthologs for AO353_26720 only; 15 genomes with orthologs for AO353_19100 only