| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_19135 | | aromatic ring-opening dioxygenase LigB | 1.0 | AO353_12190 | | maltodextrin phosphorylase | 0.30 | 8 |
| Pseudomonas fluorescens GW456-L13 | 0.85 | PfGW456L13_2248 | | FIG074102: hypothetical protein | 0.96 | PfGW456L13_338 | | Glycogen phosphorylase (EC 2.4.1.1) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.85 | PS417_08545 | | aromatic ring-opening dioxygenase LigB | 0.91 | PS417_01675 | | maltodextrin phosphorylase | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_264 | | FIG074102: hypothetical protein | 0.97 | Pf1N1B4_1599 | | Glycogen phosphorylase (EC 2.4.1.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.84 | AO356_03105 | | aromatic ring-opening dioxygenase LigB | 0.95 | AO356_09685 | | maltodextrin phosphorylase | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.84 | PFLU_RS08495 | | dioxygenase | 0.90 | PFLU_RS01730 | | glycogen/starch/alpha-glucan phosphorylase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.84 | PFLU_RS08495 | | dioxygenase | 0.90 | PFLU_RS01730 | | glycogen/starch/alpha-glucan phosphorylase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_2449 | | FIG074102: hypothetical protein | 0.95 | Pf6N2E2_3816 | | Glycogen phosphorylase (EC 2.4.1.1) | 0.34 | 3 |
| Pseudomonas sp. RS175 | 0.81 | PFR28_00981 | | 4,5-DOPA dioxygenase extradiol | 0.95 | PFR28_04953 | | Maltodextrin phosphorylase | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.79 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 0.87 | Psyr_0374 | | Phosphorylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.79 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 0.87 | Psyr_0374 | | Phosphorylase | low | > 86 |
| Pseudomonas putida KT2440 | 0.76 | PP_1869 | | 4,5-DOPA-dioxygenase | 0.85 | PP_5041 | | glycogen phosphorylase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_22555 | | hypothetical protein | 0.75 | OH686_01475 | | Glycogen phosphorylase | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_05688 | | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family | 0.47 | H281DRAFT_03054 | | glycogen phosphorylase | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS27690 | | class III extradiol ring-cleavage dioxygenase | 0.47 | QEN71_RS14305 | | glycogen/starch/alpha-glucan phosphorylase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS17535 | | extradiol ring-cleavage dioxygenase class III protein subunit B | 0.47 | BPHYT_RS29590 | | glycogen phosphorylase | low | > 109 |
| Shewanella loihica PV-4 | 0.43 | Shew_2275 | | extradiol ring-cleavage dioxygenase III subunit B (RefSeq) | 0.40 | Shew_1170 | | glycogen/starch/alpha-glucan phosphorylase (RefSeq) | low | > 60 |
| Paraburkholderia graminis OAS925 | 0.42 | ABIE53_003667 | | 4,5-DOPA dioxygenase extradiol | 0.48 | ABIE53_005130 | | starch phosphorylase | low | > 113 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0409 | | hypothetical protein (RefSeq) | 0.39 | Sama_2451 | | phosphorylase (RefSeq) | low | > 62 |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A0209 | | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (NCBI) | 0.47 | Rru_A2244 | | Glycogen/starch/alpha-glucan phosphorylase (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS05290 | | extradiol ring-cleavage dioxygenase | 0.54 | AZOBR_RS14740 | | glycogen phosphorylase | low | > 97 |
| Pantoea sp. MT58 | 0.39 | IAI47_03120 | | 4,5-DOPA dioxygenase extradiol | 0.46 | IAI47_01700 | | glycogen phosphorylase | low | > 76 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS24415 | | dioxygenase | 0.46 | BWI76_RS26195 | | glycogen phosphorylase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_03885 | | 4,5-DOPA dioxygenase extradiol | 0.46 | MPMX20_04310 | | Maltodextrin phosphorylase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_3076 | | Uncharacterized conserved protein | 0.46 | EX28DRAFT_4119 | | glycogen/starch/alpha-glucan phosphorylases | low | > 76 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_1685 | | extradiol ring-cleavage dioxygenase III subunit B (RefSeq) | 0.41 | Shewana3_2932 | | glycogen/starch/alpha-glucan phosphorylases (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.36 | IAI46_22030 | | 4,5-DOPA dioxygenase extradiol | 0.44 | IAI46_23920 | | glycogen phosphorylase | low | > 86 |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_00554 | | 4,5-DOPA dioxygenase extradiol | 0.54 | MPMX19_01194 | | Maltodextrin phosphorylase | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.36 | AMB_RS01145 | | dioxygenase | 0.51 | AMB_RS15415 | | glycogen/starch/alpha-glucan phosphorylase | low | > 64 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF3152 | | Uncharacterized protein ygiD | 0.47 | GFF579 | | Glycogen phosphorylase (EC 2.4.1.1) | low | > 78 |
| Variovorax sp. SCN45 | 0.36 | GFF5260 | | Uncharacterized protein ygiD | 0.49 | GFF7301 | | Glycogen phosphorylase (EC 2.4.1.1) | low | > 127 |
| Dickeya dianthicola 67-19 | 0.36 | HGI48_RS01620 | | 4,5-DOPA dioxygenase extradiol | 0.48 | HGI48_RS19835 | | glycogen phosphorylase | low | > 71 |
| Shewanella oneidensis MR-1 | 0.36 | SO1909 | | conserved hypothetical protein (NCBI ptt file) | 0.41 | SO1496 | | glycogen phosphorylase family protein (NCBI ptt file) | low | > 76 |
| Escherichia coli BL21 | 0.36 | ECD_02911 | | 4,5- DOPA-extradiol-dioxygenase | 0.46 | ECD_03280 | | glycogen phosphorylase | low | > 61 |
| Escherichia coli ECOR38 | 0.36 | HEPCGN_17665 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | HEPCGN_15720 | glgP | glycogen phosphorylase | low | > 87 |
| Escherichia coli BW25113 | 0.36 | b3039 | ygiD | predicted dioxygenase (RefSeq) | 0.46 | b3428 | glgP | glycogen phosphorylase (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.36 | BNILDI_00920 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | BNILDI_02820 | glgP | glycogen phosphorylase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.36 | OHPLBJKB_00665 | | 4,5-DOPA dioxygenase extradiol | 0.46 | OHPLBJKB_00273 | | Maltodextrin phosphorylase | low | > 73 |
| Escherichia coli ECOR27 | 0.36 | NOLOHH_10595 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | NOLOHH_08695 | glgP | glycogen phosphorylase | low | > 75 |
| Escherichia coli ECRC98 | 0.35 | JDDGAC_22425 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | JDDGAC_20535 | glgP | glycogen phosphorylase | low | > 86 |
| Dickeya dadantii 3937 | 0.35 | DDA3937_RS01725 | | 4,5-DOPA dioxygenase extradiol | 0.48 | DDA3937_RS19725 | | glycogen phosphorylase | low | > 74 |
| Escherichia coli ECRC99 | 0.35 | KEDOAH_09355 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | KEDOAH_11235 | glgP | glycogen phosphorylase | — | — |
| Escherichia coli ECRC101 | 0.35 | MCAODC_09305 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | MCAODC_07435 | glgP | glycogen phosphorylase | low | > 87 |
| Escherichia coli ECRC102 | 0.35 | NIAGMN_16555 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | NIAGMN_14675 | glgP | glycogen phosphorylase | — | — |
| Escherichia coli ECRC100 | 0.35 | OKFHMN_18790 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.46 | OKFHMN_16905 | glgP | glycogen phosphorylase | low | > 80 |
| Dickeya dianthicola ME23 | 0.35 | DZA65_RS01695 | | 4,5-DOPA dioxygenase extradiol | 0.48 | DZA65_RS20910 | | glycogen phosphorylase | low | > 75 |
| Escherichia fergusonii Becca | 0.35 | EFB2_00767 | | 4,5-DOPA dioxygenase extradiol | 0.46 | EFB2_00391 | | Maltodextrin phosphorylase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.35 | ECOLIN_RS17550 | | 4,5-DOPA dioxygenase extradiol | 0.46 | ECOLIN_RS19620 | | glycogen phosphorylase | low | > 55 |
| Rahnella sp. WP5 | 0.35 | EX31_RS08115 | | 4,5-DOPA dioxygenase extradiol | 0.45 | EX31_RS05005 | | glycogen phosphorylase | 0.39 | 80 |
| Pectobacterium carotovorum WPP14 | 0.35 | HER17_RS19840 | | 4,5-DOPA dioxygenase extradiol | 0.46 | HER17_RS01505 | | glycogen phosphorylase | low | > 75 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS07060 | | 4,5-DOPA dioxygenase extradiol | 0.49 | ABID97_RS04530 | | glycogen/starch/alpha-glucan phosphorylase | low | > 91 |
| Pseudomonas stutzeri RCH2 | 0.31 | Psest_2164 | | Uncharacterized conserved protein | 0.75 | Psest_3957 | | glycogen/starch/alpha-glucan phosphorylases | low | > 67 |
| Rhodopseudomonas palustris CGA009 | 0.29 | TX73_022210 | | class III extradiol ring-cleavage dioxygenase | 0.58 | TX73_024565 | | glycogen/starch/alpha-glucan phosphorylase | low | > 86 |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_02162 | | LigB family dioxygenase | 0.43 | MIT1002_01535 | | Maltodextrin phosphorylase | low | > 70 |
Not shown: 29 genomes with orthologs for AO353_19135 only; 8 genomes with orthologs for AO353_12190 only