Conservation of cofitness between AO353_07550 and AO353_03295 in Pseudomonas fluorescens FW300-N2E3

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_07550 chloramphenical resistance permease RarD 1.0 AO353_03295 ribonuclease BN 0.27 15
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2480 Protein rarD 0.88 Pf1N1B4_569 Ribonuclease BN (EC 3.1.-.-) low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1142 Protein rarD 0.88 PfGW456L13_1913 Ribonuclease BN (EC 3.1.-.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4754 Protein rarD 0.86 Pf6N2E2_2870 Ribonuclease BN (EC 3.1.-.-) low > 103
Pseudomonas sp. RS175 0.93 PFR28_04108 Protein RarD 0.85 PFR28_00588 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_14110 Putative D-serine transporter (from data) 0.86 AO356_05085 ribonuclease BN low > 104
Pseudomonas fluorescens SBW25 0.91 PFLU_RS27675 EamA family transporter RarD 0.79 PFLU_RS23665 YihY/virulence factor BrkB family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS27675 EamA family transporter RarD 0.79 PFLU_RS23665 YihY/virulence factor BrkB family protein low > 109
Pseudomonas simiae WCS417 0.91 PS417_26030 chloramphenical resistance permease RarD 0.79 PS417_22050 ribonuclease BN low > 88
Pseudomonas putida KT2440 0.90 PP_0358 conserved membrane protein of unknown function 0.76 PP_4560 putative Ribonuclease BN low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4698 RarD protein 0.79 Psyr_3781 Ribonuclease BN low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4698 RarD protein 0.79 Psyr_3781 Ribonuclease BN low > 86
Pseudomonas sp. S08-1 0.72 OH686_10385 Uncharacterized inner membrane protein RarD 0.48 OH686_07230 Inner membrane protein YihY, formerly thought to be RNase BN low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0356 rarD protein 0.57 Psest_2881 Predicted membrane protein low > 67
Escherichia coli ECRC102 0.48 NIAGMN_12130 rarD EamA family transporter RarD 0.10 NIAGMN_11760 yihY virulence factor BrkB family protein — —
Escherichia coli ECRC62 0.48 BNILDI_05025 rarD EamA family transporter RarD 0.10 BNILDI_05390 yihY virulence factor BrkB family protein low > 75
Escherichia coli ECOR27 0.48 NOLOHH_06505 rarD EamA family transporter RarD 0.09 NOLOHH_06140 yihY virulence factor BrkB family protein low > 75
Escherichia coli ECRC100 0.48 OKFHMN_14375 rarD EamA family transporter RarD 0.10 OKFHMN_14005 yihY virulence factor BrkB family protein low > 80
Escherichia coli ECRC99 0.48 KEDOAH_13775 rarD EamA family transporter RarD 0.10 KEDOAH_14150 yihY virulence factor BrkB family protein — —
Escherichia coli ECRC98 0.48 JDDGAC_18000 rarD EamA family transporter RarD 0.10 JDDGAC_17630 yihY virulence factor BrkB family protein low > 86
Escherichia fergusonii Becca 0.48 EFB2_04818 Protein RarD 0.10 EFB2_04732 hypothetical protein low > 86
Escherichia coli ECRC101 0.48 MCAODC_04880 rarD EamA family transporter RarD 0.10 MCAODC_04505 yihY virulence factor BrkB family protein low > 87
Escherichia coli BW25113 0.48 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.10 b3886 rbn ribonuclease BN (NCBI) low > 76
Escherichia coli ECOR38 0.48 HEPCGN_13075 rarD EamA family transporter RarD 0.10 HEPCGN_12640 yihY virulence factor BrkB family protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04232 Protein RarD 0.10 OHPLBJKB_04168 hypothetical protein low > 73
Escherichia coli BL21 0.48 ECD_03698 putative chloramphenical resistance permease 0.10 ECD_03771 BrkB family putative transporter, inner membrane protein low > 61
Escherichia coli Nissle 1917 0.47 ECOLIN_RS21920 EamA family transporter RarD 0.10 ECOLIN_RS22380 virulence factor BrkB family protein low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF245 Protein rarD 0.10 GFF2241 Inner membrane protein YihY, formerly thought to be RNase BN low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_04461 Protein RarD 0.11 MPMX20_04583 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4484 rarD protein 0.10 EX28DRAFT_4368 Predicted membrane protein low > 76
Serratia liquefaciens MT49 0.46 IAI46_00755 EamA family transporter RarD 0.10 IAI46_24935 virulence factor BrkB family protein low > 86
Shewanella oneidensis MR-1 0.46 SO4243 rarD rarD protein (NCBI ptt file) 0.10 SO4401 rbn ribonuclease BN (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.46 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.10 Shew_3545 rbn ribonuclease BN (RefSeq) low > 60
Pantoea sp. MT58 0.45 IAI47_18375 EamA family transporter RarD 0.09 IAI47_00475 virulence factor BrkB family protein low > 76
Shewanella amazonensis SB2B 0.45 Sama_0332 rarD protein (RefSeq) 0.09 Sama_3404 rbn ribonuclease BN (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.45 MIT1002_00151 putative chloramphenical resistance permease RarD 0.19 MIT1002_02941 ribonuclease BN/unknown domain fusion protein 0.38 67
Klebsiella michiganensis M5al 0.44 BWI76_RS01230 chloramphenicol resistance permease RarD 0.10 BWI76_RS00420 hypothetical protein low > 92
Rahnella sp. WP5 0.44 EX31_RS15195 EamA family transporter RarD 0.09 EX31_RS15855 virulence factor BrkB family protein low > 89
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_01040 protein RarD 0.09 CSW01_13830 YihY/virulence factor BrkB family protein low > 62
Agrobacterium fabrum C58 0.38 Atu1068 hypothetical protein 0.16 Atu3590 transporter low > 89
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_3478 rarD protein 0.11 Ga0059261_2467 Predicted membrane protein low > 68
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS23555 membrane protein 0.08 HSERO_RS07240 membrane protein low > 78
Phaeobacter inhibens DSM 17395 0.36 PGA1_c33100 protein RarD 0.17 PGA1_c16090 putative tRNA-processing ribonuclease low > 62
Azospirillum brasilense Sp245 0.36 AZOBR_RS04315 transporter 0.24 AZOBR_RS15035 membrane protein low > 97
Azospirillum sp. SherDot2 0.34 MPMX19_00476 Protein RarD 0.25 MPMX19_05716 hypothetical protein low > 112
Rhodospirillum rubrum S1H 0.33 Rru_A0706 RarD protein (NCBI) 0.16 Rru_A0430 Ribonuclease BN (NCBI) low > 58
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_15360 permease 0.19 CA264_13070 ribonuclease bn low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1172 Chloramphenicol-sensitive protein rarD 0.22 GFF5116 Inner membrane protein YihY, formerly thought to be RNase BN low > 90
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS22830 permease 0.22 CA265_RS08075 ribonuclease BN low > 88

Not shown: 26 genomes with orthologs for AO353_07550 only; 5 genomes with orthologs for AO353_03295 only