Conservation of cofitness between ABZR87_RS01580 and ABZR87_RS19185 in Ralstonia sp. UNC404CL21Col

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS01580 CinA family protein 1.0 ABZR87_RS19185 response regulator 0.54 2
Ralstonia solanacearum PSI07 0.96 RPSI07_RS11330 CinA family protein 0.91 RPSI07_RS05345 DNA-binding response regulator — —
Ralstonia solanacearum GMI1000 0.94 RS_RS13860 CinA family protein 0.90 RS_RS22730 DNA-binding response regulator — —
Ralstonia solanacearum UW163 0.94 UW163_RS07710 CinA family protein 0.91 UW163_RS20875 DNA-binding response regulator — —
Ralstonia solanacearum IBSBF1503 0.94 RALBFv3_RS05915 CinA family protein 0.91 RALBFv3_RS18255 DNA-binding response regulator low > 76
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS17625 damage-inducible protein CinA 0.41 RR42_RS01155 transcriptional regulator low > 128
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS27055 CinA family protein 0.65 QEN71_RS15060 response regulator low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF3091 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.49 GFF3898 Response regulator BaeR low > 90
Variovorax sp. SCN45 0.54 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.63 GFF5987 Response regulator BaeR low > 127
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS16840 competence damage-inducible protein A 0.55 HSERO_RS23070 transcriptional regulator low > 78
Acidovorax sp. GW101-3H11 0.49 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.52 Ac3H11_945 Response regulator BaeR low > 79
Enterobacter sp. TBS_079 0.47 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.62 MPMX20_03065 Transcriptional regulatory protein BaeR low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2786 amidohydrolase, PncC family 0.62 EX28DRAFT_0479 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Dickeya dianthicola ME23 0.47 DZA65_RS17455 nicotinamide-nucleotide amidase 0.62 DZA65_RS16185 two-component system response regulator BaeR low > 75
Klebsiella michiganensis M5al 0.46 BWI76_RS22185 hypothetical protein 0.60 BWI76_RS19275 DNA-binding response regulator low > 92
Dickeya dadantii 3937 0.46 DDA3937_RS16250 nicotinamide-nucleotide amidase 0.62 DDA3937_RS15285 two-component system response regulator BaeR low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS16360 nicotinamide-nucleotide amidase 0.62 HGI48_RS15365 two-component system response regulator BaeR low > 71
Escherichia coli ECRC99 0.45 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.62 KEDOAH_03975 baeR two-component system response regulator BaeR — —
Escherichia coli BL21 0.45 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.62 ECD_01984 response regulator in two-component regulatory system with BaeS — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.62 OHPLBJKB_01625 Transcriptional regulatory protein BaeR low > 73
Escherichia coli Nissle 1917 0.45 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.62 ECOLIN_RS12220 two-component system response regulator BaeR — —
Escherichia coli ECRC62 0.45 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.62 BNILDI_14435 baeR two-component system response regulator BaeR low > 75
Escherichia coli ECRC101 0.45 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.62 MCAODC_20765 baeR two-component system response regulator BaeR low > 87
Escherichia coli ECRC102 0.45 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.62 NIAGMN_22120 baeR two-component system response regulator BaeR — —
Escherichia coli BW25113 0.45 b2700 ygaD competence damage-inducible protein A (NCBI) 0.62 b2079 baeR DNA-binding response regulator in two-component regulatory system with BaeS (NCBI) low > 76
Escherichia coli ECRC100 0.45 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.62 OKFHMN_24175 baeR two-component system response regulator BaeR low > 80
Escherichia coli ECRC98 0.45 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.62 JDDGAC_28285 baeR two-component system response regulator BaeR low > 86
Escherichia coli ECOR38 0.45 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.62 HEPCGN_02865 baeR two-component system response regulator BaeR low > 87
Escherichia fergusonii Becca 0.45 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.62 EFB2_01776 Transcriptional regulatory protein BaeR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.61 GFF3850 Response regulator BaeR low > 78
Escherichia coli ECOR27 0.45 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.62 NOLOHH_15520 baeR two-component system response regulator BaeR low > 75
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_16800 damage-inducible protein CinA 0.38 AO353_15610 chemotaxis protein CheY low > 101
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS04795 CinA family protein 0.40 A4249_RS12165 response regulator transcription factor — —
Rahnella sp. WP5 0.43 EX31_RS07805 nicotinamide-nucleotide amidase 0.62 EX31_RS20315 two-component system response regulator BaeR low > 89
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_01811 competence/damage-inducible protein CinA 0.39 CCNA_00237 two-component response regulator chvI — —
Caulobacter crescentus NA1000 0.43 CCNA_01811 competence/damage-inducible protein CinA 0.39 CCNA_00237 two-component response regulator chvI low > 66
Pantoea sp. MT58 0.42 IAI47_04295 nicotinamide-nucleotide amidase 0.60 IAI47_06850 two-component system response regulator BaeR low > 76
Serratia liquefaciens MT49 0.42 IAI46_03835 nicotinamide-nucleotide amidase 0.64 IAI46_18995 two-component system response regulator BaeR low > 86
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.38 Pf1N1B4_2465 Two-component response regulator CreB low > 87
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_05675 damage-inducible protein CinA 0.64 AO356_00710 transcriptional regulator low > 104
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.36 Xcc-8004.1779.1 Two-component response regulator CreB low > 74
Pectobacterium carotovorum WPP14 0.41 HER17_RS05040 nicotinamide-nucleotide amidase 0.64 HER17_RS06300 two-component system response regulator BaeR low > 75
Pseudomonas fluorescens SBW25 0.40 PFLU_RS05880 CinA family protein 0.61 PFLU_RS20150 response regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS05880 CinA family protein 0.61 PFLU_RS20150 response regulator low > 109
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.64 Pf6N2E2_219 Response regulator BaeR low > 103
Pseudomonas simiae WCS417 0.40 PS417_05810 damage-inducible protein CinA 0.62 PS417_18300 transcriptional regulator low > 88
Castellaniella sp019104865 MT123 0.40 ABCV34_RS10110 CinA family protein 0.62 ABCV34_RS02930 response regulator low > 48
Azospirillum sp. SherDot2 0.39 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.37 MPMX19_02618 Transcriptional regulatory protein BaeR low > 112
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.38 PfGW456L13_1127 Two-component response regulator CreB low > 87
Pseudomonas sp. RS175 0.39 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC 0.37 PFR28_04123 Transcriptional regulatory protein CreB low > 88
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1530 competence/damage-inducible protein CinA C-terminal domain 0.54 B158DRAFT_0334 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 40
Erwinia tracheiphila SCR3 0.37 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.54 LU632_RS08670 baeR two-component system response regulator BaeR low > 74
Dinoroseobacter shibae DFL-12 0.36 Dshi_1579 CinA domain protein (RefSeq) 0.37 Dshi_0212 two component transcriptional regulator, winged helix family (RefSeq) low > 64
Agrobacterium fabrum C58 0.35 Atu1442 competence/damage-inducible protein CinA 0.36 Atu0034 two component response regulator — —
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_1920 amidohydrolase, PncC family 0.41 Ga0059261_2956 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 68
Bifidobacterium breve UCC2003 0.18 BBR_RS16545 CinA family protein 0.39 BBR_RS14235 DNA-binding response regulator — —

Not shown: 26 genomes with orthologs for ABZR87_RS01580 only; 7 genomes with orthologs for ABZR87_RS19185 only