| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 1.0 | ABZR87_RS07390 | | ABC transporter ATP-binding protein/permease | 0.59 | 18 |
| Ralstonia solanacearum PSI07 | 0.76 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.88 | RPSI07_RS21780 | | ABC transporter ATP-binding protein/permease | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS09450 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.87 | RALBFv3_RS11430 | | ABC transporter ATP-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS04130 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.87 | UW163_RS02155 | | ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.73 | RS_RS00050 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.87 | RS_RS02260 | | ABC transporter ATP-binding protein/permease | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS02415 | | hemolysin D | 0.48 | HSERO_RS23910 | | ABC transporter ATP-binding protein | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS20645 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.61 | RR42_RS02390 | | ABC transporter ATP-binding protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF3839 | | RND efflux system, membrane fusion protein CmeA | 0.38 | GFF1394 | | ABC transporter, fused ATPase and inner membrane subunits (EC 3.6.3.27) | low | > 90 |
| Variovorax sp. SCN45 | 0.47 | GFF3726 | | RND efflux system, membrane fusion protein | 0.39 | GFF5215 | | Efflux ABC transporter, permease/ATP-binding protein | low | > 127 |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.40 | ABID97_RS06925 | | ABC transporter ATP-binding protein/permease | low | > 91 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.44 | QEN71_RS27945 | | ABC transporter ATP-binding protein/permease | low | > 153 |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | NIAGMN_25400 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.23 | OHPLBJKB_02221 | | Inner membrane ABC transporter ATP-binding protein YddA | low | > 73 |
| Escherichia coli ECRC101 | 0.44 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | MCAODC_16670 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | low | > 87 |
| Escherichia coli ECRC100 | 0.44 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | OKFHMN_01270 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | low | > 80 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | NOLOHH_18910 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | — | — |
| Escherichia coli ECRC62 | 0.44 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | BNILDI_17400 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | low | > 75 |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | HEPCGN_26530 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | low | > 87 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | KEDOAH_27170 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | — | — |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | ECOLIN_RS08585 | | ABC transporter ATP-binding protein/permease | — | — |
| Escherichia coli BW25113 | 0.44 | b0463 | acrA | multidrug efflux system (NCBI) | 0.23 | b1496 | yddA | fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.23 | JDDGAC_03760 | yddA | Inner membrane ABC transporter ATP-binding protein YddA | low | > 86 |
| Escherichia coli BL21 | 0.44 | ECD_00414 | | multidrug efflux system | 0.23 | ECD_01454 | | putative multidrug ABC transporter permease/ATPase | — | — |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | DDA3937_RS04390 | | ABC transporter ATP-binding protein/permease | low | > 74 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | 0.49 | IAI46_20555 | | ABC transporter ATP-binding protein/permease | low | > 86 |
| Rahnella sp. WP5 | 0.43 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.48 | EX31_RS13305 | | ABC transporter ATP-binding protein/permease | low | > 89 |
| Azospirillum sp. SherDot2 | 0.42 | MPMX19_05883 | | Multidrug resistance protein MexA | 0.41 | MPMX19_05050 | | Inner membrane ABC transporter ATP-binding protein YddA | low | > 112 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_12590 | | RND transporter | 0.43 | PS417_04105 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | 0.43 | PFLU_RS04145 | | ABC transporter ATP-binding protein/permease | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | 0.43 | PFLU_RS04145 | | ABC transporter ATP-binding protein/permease | low | > 109 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS16175 | | hemolysin D | 0.44 | BPHYT_RS17790 | | ABC transporter ATP-binding protein | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | HER17_RS17240 | | ABC transporter ATP-binding protein/permease | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_2955 | | RND efflux system, membrane fusion protein CmeA | 0.43 | PfGW456L13_5047 | | ABC transporter, ATP-binding protein | low | > 87 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_04171 | | membrane fusion protein, multidrug efflux system | 0.43 | H281DRAFT_05635 | | putative ATP-binding cassette transporter | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | 0.43 | ABIE53_003717 | | putative ATP-binding cassette transporter | low | > 113 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS30180 | | hemolysin D | 0.25 | AZOBR_RS26055 | | ABC transporter | low | > 97 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_28725 | | RND transporter | 0.42 | AO356_07200 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas sp. RS175 | 0.40 | PFR28_02462 | | Multidrug resistance protein MexA | 0.41 | PFR28_00138 | | Vitamin B12 transport ATP-binding protein BacA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_1660 | | RND efflux system, membrane fusion protein CmeA | 0.43 | Pf6N2E2_3301 | | ABC transporter, ATP-binding protein | low | > 103 |
| Pseudomonas putida KT2440 | 0.40 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | 0.30 | PP_2240 | | putative ABC efflux transporter, permease/ATP-binding protein | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_26840 | | RND transporter | 0.43 | AO353_05330 | | ABC transporter ATP-binding protein | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_4007 | | Secretion protein HlyD | 0.37 | Psyr_4229 | | ABC transporter:ABC transporter, N-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_4007 | | Secretion protein HlyD | 0.37 | Psyr_4229 | | ABC transporter:ABC transporter, N-terminal | low | > 86 |
| Rhodopseudomonas palustris CGA009 | 0.39 | TX73_014170 | | efflux RND transporter periplasmic adaptor subunit | 0.40 | TX73_005830 | | ABC transporter ATP-binding protein/permease | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_4773 | | RND efflux system, membrane fusion protein CmeA | 0.41 | Pf1N1B4_1114 | | ABC transporter, ATP-binding protein | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A2050 | | Secretion protein HlyD (NCBI) | 0.24 | Rru_A3300 | | ABC transporter component (NCBI) | low | > 58 |
| Sinorhizobium meliloti 1021 | 0.37 | SMc02868 | | multidrug efflux system protein | 0.22 | SM_b20937 | | ABC transporter ATP-binding protein/permease | low | > 103 |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | ABIE40_RS30360 | | ABC transporter ATP-binding protein/permease | low | > 107 |
| Dechlorosoma suillum PS | 0.34 | Dsui_3181 | | RND family efflux transporter, MFP subunit | 0.25 | Dsui_2049 | | ABC-type uncharacterized transport system, permease and ATPase component | low | > 51 |
| Agrobacterium fabrum C58 | 0.34 | Atu3203 | | RND multidrug efflux membrane permease | 0.29 | Atu3060 | | ABC transporter permease | low | > 89 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | 0.28 | ABCV34_RS05905 | | ABC transporter ATP-binding protein/permease | low | > 48 |
Not shown: 38 genomes with orthologs for ABZR87_RS05310 only; 3 genomes with orthologs for ABZR87_RS07390 only