Conservation of cofitness between ABZR87_RS10175 and ABZR87_RS03970 in Ralstonia sp. UNC404CL21Col

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS10175 MucB/RseB C-terminal domain-containing protein 1.0 ABZR87_RS03970 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.61 14
Ralstonia solanacearum UW163 0.92 UW163_RS11920 sugar dehydratase 0.89 UW163_RS04885 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.92 RALBFv3_RS14455 sugar dehydratase 0.89 RALBFv3_RS08725 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.92 RS_RS05235 sugar dehydratase 0.91 RS_RS16540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase — —
Ralstonia solanacearum PSI07 0.92 RPSI07_RS19005 sugar dehydratase 0.90 RPSI07_RS08540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 81
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS14070 sugar dehydratase 0.75 RR42_RS20125 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 128
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS04585 MucB/RseB C-terminal domain-containing protein 0.67 QEN71_RS29240 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.41 ABIE53_003041 sigma-E factor negative regulatory protein RseB 0.62 ABIE53_000244 RHH-type proline utilization regulon transcriptional repressor/proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS14395 sugar dehydratase 0.67 BPHYT_RS19355 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04357 sigma E regulatory protein, MucB/RseB 0.67 H281DRAFT_02404 L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase low > 103
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS09635 transcriptional regulator 0.53 HSERO_RS00905 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 78
Variovorax sp. SCN45 0.27 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor 0.61 GFF5175 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.5.2) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) low > 127
Castellaniella sp019104865 MT123 0.23 ABCV34_RS08345 MucB/RseB C-terminal domain-containing protein 0.57 ABCV34_RS05285 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 48
Acidovorax sp. GW101-3H11 0.23 Ac3H11_1571 Sigma factor RpoE negative regulatory protein RseB precursor 0.61 Ac3H11_2850 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) — —
Marinobacter adhaerens HP15 0.14 HP15_777 sigma E regulatory protein, MucB/RseB 0.37 HP15_2688 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) — —
Pseudomonas putida KT2440 0.14 PP_1429 Sigma factor AlgU regulatory protein MucB 0.72 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase low > 96
Pseudomonas sp. S08-1 0.13 OH686_20055 Sigma factor RpoE negative regulatory protein RseB precursor 0.69 OH686_06735 Transcriptional repressor of PutA and PutP / Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase — —
Pseudomonas simiae WCS417 0.12 PS417_07130 RNA polymerase sigma-H factor AlgU 0.72 PS417_02175 transcriptional regulator low > 88
Escherichia coli BL21 0.12 ECD_02465 anti-sigma E factor, binds RseA 0.69 ECD_01017 fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase low > 61
Escherichia coli ECRC62 0.12 BNILDI_11860 rseB sigma-E factor regulatory protein RseB 0.69 BNILDI_19670 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 75
Escherichia coli ECOR38 0.12 HEPCGN_20530 rseB sigma-E factor regulatory protein RseB 0.69 HEPCGN_23535 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC98 0.12 JDDGAC_25050 rseB sigma-E factor regulatory protein RseB 0.69 JDDGAC_08215 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 86
Escherichia fergusonii Becca 0.12 EFB2_01325 Sigma-E factor regulatory protein RseB 0.69 EFB2_03066 Bifunctional protein PutA low > 86
Escherichia coli Nissle 1917 0.12 ECOLIN_RS14550 sigma-E factor regulatory protein RseB 0.69 ECOLIN_RS05290 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 55
Escherichia coli ECRC99 0.12 KEDOAH_06835 rseB sigma-E factor regulatory protein RseB 0.69 KEDOAH_23140 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.12 OHPLBJKB_01136 Sigma-E factor regulatory protein RseB 0.69 OHPLBJKB_02652 Bifunctional protein PutA low > 73
Escherichia coli ECRC102 0.12 NIAGMN_19155 rseB sigma-E factor regulatory protein RseB 0.69 NIAGMN_23730 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.12 OKFHMN_21385 rseB sigma-E factor regulatory protein RseB 0.69 OKFHMN_04605 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 80
Escherichia coli BW25113 0.12 b2571 rseB periplasmic negative regulator of sigmaE (NCBI) 0.69 b1014 putA fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC101 0.12 MCAODC_11915 rseB sigma-E factor regulatory protein RseB 0.69 MCAODC_23990 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 87
Escherichia coli ECOR27 0.12 NOLOHH_13060 rseB sigma-E factor regulatory protein RseB 0.69 NOLOHH_21505 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 75
Pseudomonas sp. RS175 0.11 PFR28_00692 Sigma factor AlgU regulatory protein MucB 0.72 PFR28_05053 Bifunctional protein PutA low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF2109 Sigma factor RpoE negative regulatory protein RseB precursor 0.68 GFF3301 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) low > 78
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_04565 RNA polymerase subunit sigma 0.72 AO356_09015 transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.11 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor 0.72 PfGW456L13_223 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 87
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.70 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.70 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase low > 86
Pseudomonas fluorescens SBW25 0.11 PFLU_RS07240 sigma factor AlgU regulatory protein MucB 0.72 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.11 PFLU_RS07240 sigma factor AlgU regulatory protein MucB 0.72 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.11 AO353_17635 RNA polymerase subunit sigma 0.72 AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 101
Enterobacter sp. TBS_079 0.11 MPMX20_03442 Sigma-E factor regulatory protein RseB 0.69 MPMX20_01702 Bifunctional protein PutA low > 85
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor 0.72 Pf6N2E2_3685 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 103
Enterobacter asburiae PDN3 0.10 EX28DRAFT_0074 sigma E regulatory protein, MucB/RseB 0.69 EX28DRAFT_1911 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 76
Serratia liquefaciens MT49 0.10 IAI46_19575 sigma-E factor regulatory protein RseB 0.70 IAI46_15745 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 86
Dickeya dianthicola 67-19 0.10 HGI48_RS15840 sigma-E factor regulatory protein RseB 0.67 HGI48_RS20255 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 71
Dickeya dianthicola ME23 0.10 DZA65_RS16920 sigma-E factor regulatory protein RseB 0.67 DZA65_RS21300 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 75
Pseudomonas fluorescens FW300-N1B4 0.10 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor 0.71 Pf1N1B4_1489 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 87
Dickeya dadantii 3937 0.10 DDA3937_RS15755 sigma-E factor regulatory protein RseB 0.68 DDA3937_RS20115 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 74
Pantoea sp. MT58 0.09 IAI47_04860 sigma-E factor regulatory protein RseB 0.67 IAI47_08195 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 76
Klebsiella michiganensis M5al 0.09 BWI76_RS21345 sigma-E factor regulatory protein RseB 0.69 BWI76_RS10795 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 92
Rahnella sp. WP5 0.08 EX31_RS21810 sigma-E factor regulatory protein RseB 0.69 EX31_RS09420 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 89
Pectobacterium carotovorum WPP14 0.07 HER17_RS05790 sigma-E factor regulatory protein RseB 0.65 HER17_RS01110 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 75

Not shown: 8 genomes with orthologs for ABZR87_RS10175 only; 12 genomes with orthologs for ABZR87_RS03970 only