Conservation of cofitness between Sama_0429 and Sama_3508 in Shewanella amazonensis SB2B

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0429 predicted FeS cluster maintenance protein (from data) 1.0 Sama_3508 hypothetical protein (RefSeq) 0.42 9
Shewanella sp. ANA-3 0.82 Shewana3_3701 hypothetical protein (RefSeq) 0.79 Shewana3_4013 RNA-binding S1 domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO4164 predicted FeS cluster maintenance protein (from data) 0.79 SO4629 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.78 Shew_0373 hypothetical protein (RefSeq) 0.80 Shew_3634 RNA-binding S1 domain-containing protein (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02395 hypothetical protein 0.56 RR42_RS07565 transcription accessory protein low > 128
Pseudomonas sp. S08-1 0.48 OH686_10105 hypothetical protein 0.61 OH686_11100 Transcription accessory protein (S1 RNA-binding domain) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF1256 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.54 GFF4649 Transcription accessory protein (S1 RNA-binding domain) low > 90
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_12420 predicted FeS cluster maintenance protein (from data) 0.60 AO353_11740 DNA damage response protein (yhgF like) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1554 predicted FeS cluster maintenance protein (from data) 0.60 Pf1N1B4_1771 Transcription accessory protein (S1 RNA-binding domain) low > 87
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19490 hypothetical protein 0.58 HSERO_RS20945 RNA-binding protein low > 78
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_291 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.61 PfGW456L13_428 Transcription accessory protein (S1 RNA-binding domain) — —
Dechlorosoma suillum PS 0.46 Dsui_0862 hypothetical protein 0.61 Dsui_2546 transcriptional accessory protein low > 51
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4793 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.55 Ac3H11_2501 Transcription accessory protein (S1 RNA-binding domain) — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0393 Protein of unknown function DUF971 0.60 Psyr_0257 RNA binding S1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0393 Protein of unknown function DUF971 0.60 Psyr_0257 RNA binding S1 low > 86
Ralstonia solanacearum PSI07 0.45 RPSI07_RS21775 DUF971 domain-containing protein 0.57 RPSI07_RS15945 RNA-binding transcriptional accessory protein low > 81
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS11435 DUF971 domain-containing protein 0.57 RALBFv3_RS01545 RNA-binding transcriptional accessory protein 0.48 1
Pseudomonas sp. RS175 0.45 PFR28_04997 hypothetical protein 0.61 PFR28_04867 Protein YhgF — —
Ralstonia solanacearum GMI1000 0.45 RS_RS02265 DUF971 domain-containing protein 0.57 RS_RS08180 RNA-binding transcriptional accessory protein low > 80
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_09465 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.61 AO356_10175 transcription accessory protein — —
Ralstonia solanacearum UW163 0.45 UW163_RS02150 DUF971 domain-containing protein 0.57 UW163_RS14855 RNA-binding transcriptional accessory protein — —
Pseudomonas stutzeri RCH2 0.45 Psest_3938 Uncharacterized protein conserved in bacteria 0.60 Psest_3996 Transcriptional accessory protein low > 67
Pseudomonas putida KT2440 0.45 PP_5002 conserved protein of unknown function 0.60 PP_0245 putative transcriptional accessory protein — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0745 Uncharacterized protein conserved in bacteria 0.60 B158DRAFT_0683 Transcriptional accessory protein low > 40
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_3771 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.61 Pf6N2E2_3906 Transcription accessory protein (S1 RNA-binding domain) — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS07395 DUF971 domain-containing protein 0.58 ABZR87_RS13340 Tex family protein low > 80
Variovorax sp. OAS795 0.44 ABID97_RS07250 DUF971 domain-containing protein 0.54 ABID97_RS15930 Tex family protein low > 91
Pseudomonas fluorescens SBW25 0.43 PFLU_RS01955 DUF971 domain-containing protein 0.60 PFLU_RS01275 RNA-binding transcriptional accessory protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS01955 DUF971 domain-containing protein 0.60 PFLU_RS01275 RNA-binding transcriptional accessory protein low > 109
Pseudomonas simiae WCS417 0.43 PS417_01910 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.61 PS417_01165 transcription accessory protein — —
Azospirillum brasilense Sp245 0.43 AZOBR_RS00130 hypothetical protein 0.60 AZOBR_RS14535 RNA-binding protein low > 97
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS03160 hypothetical protein 0.57 BPHYT_RS12510 RNA-binding protein low > 109
Variovorax sp. SCN45 0.43 GFF2541 FIG00899427: hypothetical protein 0.53 GFF2 Transcription accessory protein (S1 RNA-binding domain) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04612 DUF971 family protein 0.57 H281DRAFT_00530 uncharacterized protein low > 103
Azospirillum sp. SherDot2 0.42 MPMX19_01909 hypothetical protein 0.60 MPMX19_04277 Protein YhgF low > 112
Paraburkholderia graminis OAS925 0.42 ABIE53_000770 DUF971 family protein 0.57 ABIE53_002728 uncharacterized protein low > 113
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02000 DUF971 domain-containing protein 0.56 QEN71_RS06045 Tex family protein low > 153
Agrobacterium fabrum C58 0.40 Atu1694 hypothetical protein 0.50 Atu0648 hypothetical protein low > 89
Rhizobium sp. OAE497 0.37 ABIE40_RS10580 DUF971 domain-containing protein 0.52 ABIE40_RS05475 Tex family protein low > 107

Not shown: 0 genomes with orthologs for Sama_0429 only; 55 genomes with orthologs for Sama_3508 only