Conservation of cofitness between Dshi_1107 and Dshi_0864 in Dinoroseobacter shibae DFL-12

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_1107 Pol-Pal system-associated acyl-CoA thioesterase (RefSeq) 1.0 Dshi_0864 (2Fe-2S)-binding domain protein (RefSeq) 0.34 15
Phaeobacter inhibens DSM 17395 0.53 PGA1_c05890 thioesterase domain-containing protein 0.64 PGA1_c09950 isoquinoline 1-oxidoreductase subunit alpha low > 62
Sinorhizobium meliloti 1021 0.45 SMc03960 hypothetical protein 0.68 SM_b20343 isoquinoline 1-oxidoreductase low > 103
Rhizobium sp. OAE497 0.44 ABIE40_RS15620 tol-pal system-associated acyl-CoA thioesterase 0.66 ABIE40_RS13395 (2Fe-2S)-binding protein low > 107
Bosea sp. OAE506 0.44 ABIE41_RS09500 tol-pal system-associated acyl-CoA thioesterase 0.52 ABIE41_RS16640 (2Fe-2S)-binding protein
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS15480 acyl-CoA thioesterase 0.61 RR42_RS25795 (2Fe-2S)-binding protein low > 128
Ralstonia solanacearum GMI1000 0.42 RS_RS03680 tol-pal system-associated acyl-CoA thioesterase 0.60 RS_RS18705 (2Fe-2S)-binding protein low > 80
Ralstonia solanacearum PSI07 0.42 RPSI07_RS20320 tol-pal system-associated acyl-CoA thioesterase 0.60 RPSI07_RS04200 (2Fe-2S)-binding protein low > 81
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS12905 tol-pal system-associated acyl-CoA thioesterase 0.59 RALBFv3_RS20720 (2Fe-2S)-binding protein low > 76
Caulobacter crescentus NA1000 0.42 CCNA_03342 short-chain acyl-CoA hydrolase 0.59 CCNA_02353 membrane-bound aldehyde dehydrogenase iron-sulfur protein low > 66
Ralstonia solanacearum UW163 0.42 UW163_RS00660 tol-pal system-associated acyl-CoA thioesterase 0.59 UW163_RS17355 (2Fe-2S)-binding protein
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_03342 short-chain acyl-CoA hydrolase 0.59 CCNA_02353 membrane-bound aldehyde dehydrogenase iron-sulfur protein low > 67
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS08965 tol-pal system-associated acyl-CoA thioesterase 0.59 ABZR87_RS22360 (2Fe-2S)-binding protein low > 80
Variovorax sp. SCN45 0.39 GFF574 Tol-Pal system-associated acyl-CoA thioesterase 0.60 GFF6737 Uncharacterized aldehyde oxidase, 2Fe-2S subunit low > 127
Variovorax sp. OAS795 0.39 ABID97_RS17965 YbgC/FadM family acyl-CoA thioesterase 0.52 ABID97_RS29115 (2Fe-2S)-binding protein low > 91
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS26245 tol-pal system-associated acyl-CoA thioesterase 0.65 QEN71_RS30050 (2Fe-2S)-binding protein low > 153
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3161 tol-pal system-associated acyl-CoA thioesterase 0.49 Ga0059261_4049 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs low > 68
Azospirillum sp. SherDot2 0.37 MPMX19_00699 Acyl-CoA thioesterase YbgC 0.62 MPMX19_05948 Isoquinoline 1-oxidoreductase subunit alpha low > 112
Azospirillum brasilense Sp245 0.37 AZOBR_RS09055 acyl-CoA thioester hydrolase 0.64 AZOBR_RS30035 (2Fe-2S)-binding protein low > 97
Acidovorax sp. GW101-3H11 0.37 Ac3H11_3136 4-hydroxybenzoyl-CoA thioesterase family active site 0.58 Ac3H11_2238 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) low > 79
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS06130 4-hydroxybenzoyl-CoA thioesterase 0.45 HSERO_RS06620 (2Fe-2S)-binding protein low > 78
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10825 tol-pal system-associated acyl-CoA thioesterase 0.35 ABZR86_RS01535 (2Fe-2S)-binding protein low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF5172 4-hydroxybenzoyl-CoA thioesterase family active site 0.59 GFF2078 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) low > 90
Alteromonas macleodii MIT1002 0.35 MIT1002_01334 Acyl-CoA thioester hydrolase YbgC 0.56 MIT1002_01820 Isoquinoline 1-oxidoreductase subunit alpha low > 70
Serratia liquefaciens MT49 0.32 IAI46_06315 tol-pal system-associated acyl-CoA thioesterase 0.64 IAI46_11885 (2Fe-2S)-binding protein low > 86
Shewanella sp. ANA-3 0.32 Shewana3_2535 4-hydroxybenzoyl-CoA thioesterase (RefSeq) 0.55 Shewana3_1496 2Fe-2S iron-sulfur cluster binding domain-containing protein (RefSeq) low > 73
Pseudomonas sp. S08-1 0.31 OH686_19140 tol-pal system-associated acyl-CoA thioesterase 0.58 OH686_18540 isoquinoline 1-oxidoreductase subunit alpha low > 80
Shewanella oneidensis MR-1 0.31 SO2752 conserved hypothetical protein TIGR00051 (NCBI ptt file) 0.55 SO3049 isoquinoline 1-oxidoreductase, alpha subunit, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.30 Sama_2090 hypothetical protein (RefSeq) 0.56 Sama_3438 isoquinoline 1-oxidoreductase, alpha subunit, putative (RefSeq) low > 62
Pseudomonas putida KT2440 0.30 PP_1218 putative acyl-CoA thioesterase 0.58 PP_2477 isoquinoline 1-oxidoreductase subunit alpha low > 96
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_636 4-hydroxybenzoyl-CoA thioesterase family active site 0.60 Pf1N1B4_4583 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
Pseudomonas sp. RS175 0.29 PFR28_03411 Acyl-CoA thioester hydrolase YbgC 0.53 PFR28_02075 Isoquinoline 1-oxidoreductase subunit alpha low > 88
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5538 4-hydroxybenzoyl-CoA thioesterase family active site 0.54 Pf6N2E2_5938 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) low > 103
Shewanella loihica PV-4 0.29 Shew_1523 4-hydroxybenzoyl-CoA thioesterase (RefSeq) 0.55 Shew_2266 2Fe-2S iron-sulfur cluster binding domain-containing protein (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_18030 4-hydroxybenzoyl-CoA thioesterase 0.54 AO356_20100 (2Fe-2S)-binding protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS24080 tol-pal system-associated acyl-CoA thioesterase 0.49 PFLU_RS11165 (2Fe-2S)-binding protein low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS24080 tol-pal system-associated acyl-CoA thioesterase 0.49 PFLU_RS11165 (2Fe-2S)-binding protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_03575 4-hydroxybenzoyl-CoA thioesterase 0.59 AO353_23430 (2Fe-2S)-binding protein low > 101
Pseudomonas simiae WCS417 0.29 PS417_22440 4-hydroxybenzoyl-CoA thioesterase 0.48 PS417_10890 Deoxyribose 1-dehydrogenase, alpha subunit (from data)
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0373 acyl-CoA thioester hydrolase, YbgC/YbaW family 0.59 Echvi_4165 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS14780 thioesterase family protein 0.60 ABZR88_RS04115 (2Fe-2S)-binding protein low > 71

Not shown: 42 genomes with orthologs for Dshi_1107 only; 7 genomes with orthologs for Dshi_0864 only