Conservation of cofitness between BT1336 and BT4258 in Bacteroides thetaiotaomicron VPI-5482

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1336 putative translation initiation inhibitor (NCBI ptt file) 1.0 BT4258 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) 0.69 16
Bacteroides ovatus ATCC 8483 0.96 BACOVA_00589 putative endoribonuclease L-PSP 0.77 BACOVA_05091 5-formyltetrahydrofolate cyclo-ligase 0.67 10
Bacteroides stercoris CC31F 0.88 HMPREF1181_RS10885 RidA family protein 0.66 HMPREF1181_RS06170 5-formyltetrahydrofolate cyclo-ligase 0.61 3
Phocaeicola vulgatus CL09T03C04 0.71 HMPREF1058_RS18400 RidA family protein 0.47 HMPREF1058_RS17145 5-formyltetrahydrofolate cyclo-ligase low > 67
Phocaeicola dorei CL03T12C01 0.70 ABI39_RS14715 RidA family protein 0.48 ABI39_RS13145 5-formyltetrahydrofolate cyclo-ligase low > 72
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS02020 RidA family protein 0.39 HMPREF1078_RS14635 5-formyltetrahydrofolate cyclo-ligase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF928 Endoribonuclease L-PSP 0.17 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 78
Pantoea sp. MT58 0.55 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.14 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase low > 76
Klebsiella michiganensis M5al 0.54 BWI76_RS02985 reactive intermediate/imine deaminase 0.15 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase low > 92
Enterobacter sp. TBS_079 0.54 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase 0.16 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase low > 85
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3444 reactive intermediate/imine deaminase 0.15 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase low > 76
Escherichia coli ECRC62 0.52 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia fergusonii Becca 0.52 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase 0.17 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_12735 RidA family protein 0.18 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase low > 62
Escherichia coli ECRC101 0.52 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC102 0.52 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.52 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECOR38 0.52 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 85
Escherichia coli ECRC99 0.52 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase 0.17 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase low > 52
Escherichia coli ECOR27 0.52 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 57
Escherichia coli ECRC98 0.52 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.17 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Erwinia tracheiphila SCR3 0.51 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.15 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase — —
Fusobacterium nucleatum SB010 0.49 HUW76_10065 RidA family protein 0.24 HUW76_05675 5-formyltetrahydrofolate cyclo-ligase low > 35
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_0972 YjgF-like protein 0.15 Synpcc7942_1300 hypothetical protein low > 38
Serratia liquefaciens MT49 0.48 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.19 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase low > 86
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS11845 RidA family protein 0.16 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.79 25
Shewanella oneidensis MR-1 0.45 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) 0.14 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) 0.14 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_17590 RidA family protein 0.14 CA264_15880 5-formyltetrahydrofolate cyclo-ligase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1205.1 hypothetical protein 0.15 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 74
Rhodanobacter denitrificans MT42 0.43 LRK55_RS11525 RidA family protein 0.20 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase low > 63
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_12095 ridA reactive intermediate/imine deaminase 0.20 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase low > 52
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS11800 RidA family protein 0.20 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.58 40
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS20925 endoribonuclease L-PSP 0.15 RALBFv3_RS09865 5-formyltetrahydrofolate cyclo-ligase low > 76
Shewanella loihica PV-4 0.40 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.14 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_0263 YjgF-like protein (RefSeq) 0.17 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.40 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase 0.14 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase low > 36
Ralstonia solanacearum UW163 0.40 UW163_RS22060 endoribonuclease L-PSP 0.15 UW163_RS03715 5-formyltetrahydrofolate cyclo-ligase — —
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_1512 endoribonuclease L-PSP (RefSeq) 0.21 DvMF_2318 5-formyltetrahydrofolate cyclo-ligase (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS05790 RidA family protein 0.14 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS05465 RidA family protein 0.16 RPSI07_RS23505 5-formyltetrahydrofolate cyclo-ligase low > 81
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1670 Putative translation initiation inhibitor, yjgF family 0.16 Ga0059261_0735 5,10-methenyltetrahydrofolate synthetase low > 68
Rhodopseudomonas palustris CGA009 0.24 TX73_018610 RidA family protein 0.14 TX73_023120 5-formyltetrahydrofolate cyclo-ligase low > 86
Magnetospirillum magneticum AMB-1 0.20 AMB_RS19400 RidA family protein 0.16 AMB_RS16280 5-formyltetrahydrofolate cyclo-ligase low > 64

Not shown: 55 genomes with orthologs for BT1336 only; 0 genomes with orthologs for BT4258 only