Conservation of cofitness between BT2407 and BT3080 in Bacteroides thetaiotaomicron VPI-5482

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2407 NAD-utilizing dehydrogenases (NCBI ptt file) 1.0 BT3080 cysteine synthase A (NCBI ptt file) 0.25 17
Bacteroides ovatus ATCC 8483 0.93 BACOVA_03018 hypothetical protein 0.91 BACOVA_02771 cysteine synthase A 0.68 2
Bacteroides stercoris CC31F 0.80 HMPREF1181_RS00080 FAD-binding protein 0.79 HMPREF1181_RS01560 cysteine synthase A low > 56
Phocaeicola dorei CL03T12C01 0.80 ABI39_RS10410 FAD-binding protein 0.72 ABI39_RS02185 cysteine synthase A low > 72
Phocaeicola vulgatus CL09T03C04 0.80 HMPREF1058_RS14705 FAD-binding protein 0.71 HMPREF1058_RS02875 cysteine synthase A low > 67
Parabacteroides merdae CL09T00C40 0.69 HMPREF1078_RS08380 FAD-binding protein 0.79 HMPREF1078_RS08075 cysteine synthase A — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.47 CA264_05655 FAD-binding protein 0.47 CA264_13470 cysteine synthase A low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS00035 FAD-binding protein 0.36 CA265_RS13740 cysteine synthase low > 88
Variovorax sp. OAS795 0.31 ABID97_RS06075 NAD(P)/FAD-dependent oxidoreductase 0.47 ABID97_RS06080 cysteine synthase A low > 91
Variovorax sp. SCN45 0.31 GFF4550 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.48 GFF4549 Cysteine synthase (EC 2.5.1.47) low > 127
Acidovorax sp. GW101-3H11 0.30 Ac3H11_1973 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.48 Ac3H11_1975 Cysteine synthase (EC 2.5.1.47) low > 79
Pseudomonas sp. S08-1 0.30 OH686_23805 NAD(FAD)-utilizing dehydrogenase, sll0175-related 0.49 OH686_05215 cysteine synthase A low > 80
Pseudomonas stutzeri RCH2 0.30 Psest_1345 Uncharacterized FAD-dependent dehydrogenases 0.45 Psest_1855 cysteine synthase A low > 67
Pseudomonas simiae WCS417 0.30 PS417_06555 hypothetical protein 0.47 PS417_07505 cysteine synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS06585 NAD(P)/FAD-dependent oxidoreductase 0.47 PFLU_RS07585 cysteine synthase A low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS06585 NAD(P)/FAD-dependent oxidoreductase 0.47 PFLU_RS07585 cysteine synthase A low > 109
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_2935 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.48 Pf6N2E2_2700 Cysteine synthase (EC 2.5.1.47) low > 103
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_05380 hypothetical protein 0.48 AO356_04305 cysteine synthase low > 104
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_3204 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.47 Pf1N1B4_3374 Cysteine synthase (EC 2.5.1.47) low > 87
Pseudomonas sp. RS175 0.30 PFR28_00528 hypothetical protein 0.48 PFR28_00734 Cysteine synthase A low > 88
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_4615 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.47 PfGW456L13_4472 Cysteine synthase (EC 2.5.1.47) low > 87
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_17065 hypothetical protein 0.48 AO353_18020 cysteine synthase low > 101
Pseudomonas putida KT2440 0.29 PP_1134 conserved protein of unknown function 0.46 PP_4571 cysteine synthase A low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_3851 conserved hypothetical protein 0.48 Psyr_1583 cysteine synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_3851 conserved hypothetical protein 0.48 Psyr_1583 cysteine synthase low > 86
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11020 NAD(P)/FAD-dependent oxidoreductase 0.43 LRK54_RS00905 cysteine synthase A low > 59
Rhodanobacter denitrificans MT42 0.28 LRK55_RS10725 NAD(P)/FAD-dependent oxidoreductase 0.43 LRK55_RS00680 cysteine synthase A low > 63
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS05000 hypothetical protein 0.46 RR42_RS21960 cysteine synthase low > 128
Dechlorosoma suillum PS 0.28 Dsui_0040 FAD-dependent dehydrogenase 0.55 Dsui_3208 cysteine synthase A low > 51
Fusobacterium nucleatum SB010 0.28 HUW76_05665 NAD(P)/FAD-dependent oxidoreductase 0.39 HUW76_04155 cysteine synthase A — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF530 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.48 GFF4578 Cysteine synthase (EC 2.5.1.47) low > 90
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_12855 Pyr-redox-2 domain-containing protein 0.42 OKGIIK_05985 cysK cysteine synthase A low > 52
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_1262 uncharacterized FAD-dependent dehydrogenase 0.54 Synpcc7942_1466 cysM cysteine synthase low > 38
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_04160 NAD(P)/FAD-dependent oxidoreductase 0.50 CSW01_04945 cysteine synthase A 0.49 50
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_01490 FAD-dependent dehydrogenase 0.51 CCNA_03740 cysteine synthase low > 67
Caulobacter crescentus NA1000 0.27 CCNA_01490 FAD-dependent dehydrogenase 0.51 CCNA_03740 cysteine synthase low > 66
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_0988 Uncharacterized FAD-dependent dehydrogenases 0.46 Ga0059261_3644 cysteine synthase A low > 68
Desulfovibrio vulgaris Miyazaki F 0.09 DvMF_2634 FAD dependent oxidoreductase (RefSeq) 0.51 DvMF_2658 cysteine synthase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.08 DVU0637 conserved hypothetical protein (TIGR) 0.55 DVU0663 cysK cysteine synthase A (TIGR) — —

Not shown: 8 genomes with orthologs for BT2407 only; 49 genomes with orthologs for BT3080 only