Conservation of cofitness between BT0976 and BT2800 in Bacteroides thetaiotaomicron VPI-5482

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0976 putative transport protein (NCBI ptt file) 1.0 BT2800 putative amidophosphoribosyl-transferase (NCBI ptt file) 0.29 16
Bacteroides ovatus ATCC 8483 0.83 BACOVA_00782 transporter, major facilitator family protein 0.83 BACOVA_02030 comF family protein low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS24170 MFS transporter 0.45 CA265_RS19150 amidophosphoribosyltransferase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_2296 Arabinose efflux permease 0.32 Echvi_1053 Predicted amidophosphoribosyltransferases low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS04970 MFS transporter 0.44 ABZR88_RS00650 ComF family protein 0.43 26
Pseudomonas stutzeri RCH2 0.16 Psest_2095 Arabinose efflux permease 0.17 Psest_0410 Predicted amidophosphoribosyltransferases low > 67
Acinetobacter radioresistens SK82 0.16 MPMX26_02459 Inner membrane protein YbjJ 0.11 MPMX26_02733 hypothetical protein low > 36
Agrobacterium fabrum C58 0.15 Atu2724 MFS permease 0.18 Atu3512 competence protein F low > 89
Erwinia tracheiphila SCR3 0.15 LU632_RS25535 MFS transporter 0.12 LU632_RS22980 phosphoribosyltransferase low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_3360 Major facilitator superfamily 0.16 Psyr_4688 Phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_3360 Major facilitator superfamily 0.16 Psyr_4688 Phosphoribosyltransferase low > 86
Pectobacterium carotovorum WPP14 0.14 HER17_RS15565 MFS transporter 0.15 HER17_RS01550 DNA utilization protein GntX low > 75
Shewanella amazonensis SB2B 0.14 Sama_2920 major facilitator transporter (RefSeq) 0.17 Sama_3504 competence protein ComF (RefSeq) 0.28 9
Pseudomonas fluorescens SBW25 0.14 PFLU_RS10350 MFS transporter 0.17 PFLU_RS27655 ComF family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS10350 MFS transporter 0.17 PFLU_RS27655 ComF family protein low > 109
Ralstonia sp. UNC404CL21Col 0.14 ABZR87_RS08125 MFS transporter 0.12 ABZR87_RS06780 ComF family protein low > 80
Rhodanobacter denitrificans MT42 0.14 LRK55_RS01620 MFS transporter 0.19 LRK55_RS09910 ComF family protein low > 63
Rhizobium sp. OAE497 0.14 ABIE40_RS10260 MFS transporter 0.17 ABIE40_RS17355 ComF family protein low > 107
Rhodanobacter denitrificans FW104-10B01 0.14 LRK54_RS01830 MFS transporter 0.19 LRK54_RS10270 ComF family protein low > 59
Sinorhizobium meliloti 1021 0.14 SMc03889 transporter 0.14 SMc02444 hypothetical protein low > 103
Pseudomonas sp. RS175 0.14 PFR28_02856 Inner membrane protein YbjJ 0.14 PFR28_04104 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.13 PS417_09770 MFS transporter 0.15 PS417_26010 amidophosphoribosyltransferase low > 88
Dickeya dianthicola ME23 0.13 DZA65_RS12370 MFS transporter 0.14 DZA65_RS20870 DNA utilization protein GntX low > 75
Azospirillum brasilense Sp245 0.13 AZOBR_RS18830 MFS transporter 0.15 AZOBR_RS02910 phosphoribosyltransferase low > 97
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_2443 Membrane protein mosC 0.18 PfGW456L13_1146 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy low > 87
Paraburkholderia graminis OAS925 0.13 ABIE53_000462 fucose permease 0.14 ABIE53_000670 ComF family protein low > 113
Enterobacter sp. TBS_079 0.13 MPMX20_01483 Inner membrane protein YbjJ 0.14 MPMX20_04300 Putative ribose-phosphate pyrophosphokinase low > 85
Pseudomonas fluorescens FW300-N2E2 0.13 Pf6N2E2_32 Membrane protein mosC 0.14 Pf6N2E2_4758 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy low > 103
Pseudomonas fluorescens FW300-N2C3 0.13 AO356_21230 MFS transporter 0.14 AO356_14130 amidophosphoribosyltransferase low > 104
Dickeya dianthicola 67-19 0.13 HGI48_RS11835 MFS transporter 0.14 HGI48_RS19780 DNA utilization protein GntX low > 71
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_19740 MFS transporter 0.16 AO353_07530 amidophosphoribosyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_115 Membrane protein mosC 0.17 Pf1N1B4_2485 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy 0.23 26
Escherichia coli ECOR38 0.12 HEPCGN_02020 ybjJ Inner membrane protein YbjJ 0.15 HEPCGN_15805 gntX DNA utilization protein GntX low > 87
Dickeya dadantii 3937 0.12 DDA3937_RS11785 MFS transporter 0.14 DDA3937_RS19650 DNA utilization protein GntX low > 74
Escherichia coli Nissle 1917 0.12 ECOLIN_RS04490 MFS transporter 0.15 ECOLIN_RS19495 DNA utilization protein GntX low > 55
Escherichia coli ECRC99 0.12 KEDOAH_21900 ybjJ Inner membrane protein YbjJ 0.15 KEDOAH_11145 gntX DNA utilization protein GntX — —
Escherichia coli BL21 0.12 ECD_00812 putative drug efflux MFS transporter, inner membrane protein 0.15 ECD_03265 DNA catabolic protein low > 61
Escherichia coli ECRC100 0.12 OKFHMN_06010 ybjJ Inner membrane protein YbjJ 0.15 OKFHMN_16995 gntX DNA utilization protein GntX low > 80
Escherichia coli BW25113 0.12 b0845 ybjJ predicted transporter (NCBI) 0.15 b3413 yhgH orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 0.12 MCAODC_25225 ybjJ Inner membrane protein YbjJ 0.15 MCAODC_07525 gntX DNA utilization protein GntX low > 87
Escherichia coli ECRC102 0.12 NIAGMN_04055 ybjJ Inner membrane protein YbjJ 0.15 NIAGMN_14765 gntX DNA utilization protein GntX — —
Dinoroseobacter shibae DFL-12 0.12 Dshi_2626 major facilitator superfamily MFS_1 (RefSeq) 0.14 Dshi_3500 competence protein F, putative (RefSeq) 0.51 6
Escherichia coli ECRC98 0.12 JDDGAC_09645 ybjJ Inner membrane protein YbjJ 0.15 JDDGAC_20625 gntX DNA utilization protein GntX low > 86
Rhodospirillum rubrum S1H 0.11 Rru_A1180 Major facilitator superfamily MFS_1 (NCBI) 0.17 Rru_A0737 Phosphoribosyltransferase (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS23500 MFS transporter permease 0.15 HSERO_RS20810 amidophosphoribosyltransferase low > 78
Escherichia fergusonii Becca 0.10 EFB2_03261 Inner membrane protein YbjJ 0.15 EFB2_00415 Putative ribose-phosphate pyrophosphokinase low > 86
Escherichia coli ECRC62 0.10 BNILDI_20640 ybjJ Inner membrane protein YbjJ 0.15 BNILDI_02735 gntX DNA utilization protein GntX low > 75
Escherichia coli ECOR27 0.10 NOLOHH_22380 ybjJ Inner membrane protein YbjJ 0.15 NOLOHH_08780 gntX DNA utilization protein GntX low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.10 OHPLBJKB_02865 Inner membrane protein YbjJ 0.15 OHPLBJKB_00290 hypothetical protein low > 73
Klebsiella michiganensis M5al 0.10 BWI76_RS09170 MFS transporter 0.17 BWI76_RS26625 gluconate transporter periplasmic gluconate-binding protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.10 GFF749 Putative transport protein/putative regulator 0.14 GFF604 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy low > 78

Not shown: 17 genomes with orthologs for BT0976 only; 17 genomes with orthologs for BT2800 only