Conservation of cofitness between SO2432 and SO2746 in Shewanella oneidensis MR-1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) 1.0 SO2746 conserved hypothetical protein (NCBI ptt file) 0.24 16
Shewanella sp. ANA-3 0.99 Shewana3_1954 hypothetical protein (RefSeq) 0.81 Shewana3_2529 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.85 Shew_2078 hypothetical protein (RefSeq) 0.69 Shew_1529 TPR repeat-containing protein (RefSeq) — —
Shewanella amazonensis SB2B 0.80 Sama_1842 hypothetical protein (RefSeq) 0.60 Sama_2084 hypothetical protein (RefSeq) low > 62
Dickeya dadantii 3937 0.76 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator 0.26 DDA3937_RS06525 cell division protein CpoB low > 74
Pectobacterium carotovorum WPP14 0.76 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator 0.29 HER17_RS14855 cell division protein CpoB low > 75
Dickeya dianthicola 67-19 0.75 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator 0.26 HGI48_RS06570 cell division protein CpoB low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator 0.26 DZA65_RS06920 cell division protein CpoB low > 75
Rahnella sp. WP5 0.73 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator 0.30 EX31_RS23505 cell division protein CpoB low > 89
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS02315 YebC/PmpR family DNA-binding transcriptional regulator 0.26 PagCFBP13505_RS03630 cell division protein CpoB low > 74
Serratia liquefaciens MT49 0.73 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator 0.26 IAI46_06345 cell division protein CpoB 0.64 47
Pantoea sp. MT58 0.72 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator 0.26 IAI47_13675 cell division protein CpoB low > 76
Erwinia amylovora T8 0.72 OLJFJH_12845 YebC/PmpR family DNA-binding transcriptional regulator 0.31 OLJFJH_16900 cell division protein CpoB low > 58
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family 0.25 EX28DRAFT_2249 tol-pal system protein YbgF low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_02769 putative transcriptional regulatory protein YebC 0.25 MPMX20_01371 Cell division coordinator CpoB low > 85
Escherichia fergusonii Becca 0.71 EFB2_02078 putative transcriptional regulatory protein YebC 0.29 EFB2_03364 Cell division coordinator CpoB low > 86
Escherichia coli ECRC102 0.71 NIAGMN_01805 putative transcriptional regulatory protein YebC 0.29 NIAGMN_04845 cpoB cell division protein CpoB — —
Escherichia coli ECRC100 0.71 OKFHMN_26255 putative transcriptional regulatory protein YebC 0.29 OKFHMN_06795 cpoB cell division protein CpoB low > 79
Escherichia coli ECRC98 0.71 JDDGAC_00830 putative transcriptional regulatory protein YebC 0.29 JDDGAC_10450 cpoB cell division protein CpoB low > 87
Escherichia coli BL21 0.71 ECD_01835 UPF0082 family protein 0.29 ECD_00702 periplasmic TolA-binding protein low > 61
Escherichia coli ECRC101 0.71 MCAODC_19150 putative transcriptional regulatory protein YebC 0.29 MCAODC_26015 cpoB cell division protein CpoB low > 88
Escherichia coli ECRC99 0.71 KEDOAH_01850 putative transcriptional regulatory protein YebC 0.29 KEDOAH_21170 cpoB cell division protein CpoB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1645 FIG000859: hypothetical protein YebC 0.30 GFF4656 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01864 putative transcriptional regulatory protein YebC 0.29 OHPLBJKB_02971 Cell division coordinator CpoB low > 74
Escherichia coli ECOR27 0.71 NOLOHH_16700 putative transcriptional regulatory protein YebC 0.29 NOLOHH_23230 cpoB cell division protein CpoB low > 76
Escherichia coli ECOR38 0.71 HEPCGN_04665 putative transcriptional regulatory protein YebC 0.29 HEPCGN_01475 cpoB cell division protein CpoB low > 88
Escherichia coli ECRC62 0.71 BNILDI_15490 putative transcriptional regulatory protein YebC 0.29 BNILDI_21225 cpoB cell division protein CpoB low > 75
Escherichia coli BW25113 0.71 b1864 yebC hypothetical protein (NCBI) 0.29 b0742 ybgF hypothetical protein (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.71 KDGMDA_25425 putative transcriptional regulatory protein KPK_1906 0.25 KDGMDA_16800 cell division protein CpoB low > 95
Erwinia tracheiphila SCR3 0.70 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator 0.30 LU632_RS16020 cpoB cell division protein CpoB low > 74
Erwinia tracheiphila HP pepo 2.2 0.70 IJEDHG_22125 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.31 IJEDHG_02075 cpoB cell division protein CpoB — —
Klebsiella michiganensis M5al 0.70 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator 0.26 BWI76_RS08545 cell division protein CpoB — —
Pseudomonas stutzeri RCH2 0.67 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family 0.19 Psest_1504 tol-pal system protein YbgF — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family 0.22 B158DRAFT_1143 tol-pal system protein YbgF low > 40
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS04735 hypothetical protein 0.16 RR42_RS15450 Tol system periplasmic component YbgF low > 128
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS17750 transcriptional regulator 0.16 HSERO_RS06100 Tol-Pal cell envelope complex subunit YbgF protein — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator 0.13 RPSI07_RS20290 tol-pal system protein YbgF — —
Ralstonia solanacearum UW163 0.54 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator 0.12 UW163_RS00630 tol-pal system protein YbgF — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator 0.12 RALBFv3_RS12935 tol-pal system protein YbgF — —
Ralstonia solanacearum GMI1000 0.54 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator 0.13 RS_RS03710 tol-pal system protein YbgF low > 80
Castellaniella sp019104865 MT123 0.53 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator 0.12 ABCV34_RS09860 tol-pal system protein YbgF — —
Lysobacter sp. OAE881 0.53 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator 0.13 ABIE51_RS05095 tol-pal system protein YbgF low > 62
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator 0.13 ABZR87_RS08995 tol-pal system protein YbgF low > 80
Variovorax sp. SCN45 0.52 GFF303 Probable transcriptional regulatory protein YebC 0.13 GFF290 Cell division coordinator CpoB 0.65 49
Variovorax sp. OAS795 0.52 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator 0.12 ABID97_RS16685 tol-pal system protein YbgF low > 91
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC 0.18 Xcc-8004.1448.1 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) 0.13 DVU2070 TPR domain protein (TIGR) low > 55
Rhodanobacter denitrificans MT42 0.44 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator 0.14 LRK55_RS04645 tol-pal system protein YbgF low > 63
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator 0.14 LRK54_RS04865 tol-pal system protein YbgF low > 59
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.12 OKGIIK_01885 ybgF tol-pal system protein YbgF low > 52
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS05110 YebC/PmpR family DNA-binding transcriptional regulator 0.13 LRK53_RS05165 tol-pal system protein YbgF low > 59
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator 0.14 ABZR86_RS10795 tol-pal system protein YbgF — —

Not shown: 65 genomes with orthologs for SO2432 only; 2 genomes with orthologs for SO2746 only