Conservation of cofitness between SO1894 and SO2191 in Shewanella oneidensis MR-1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO1894 acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) 1.0 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.40 18
Shewanella sp. ANA-3 0.93 Shewana3_1669 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) 0.95 Shewana3_2414 cystathionine beta-lyase (RefSeq) low > 73
Shewanella loihica PV-4 0.76 Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) 0.82 Shew_1789 cystathionine beta-lyase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.68 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.83 Sama_2008 cystathionine beta-lyase (RefSeq) low > 62
Azospirillum sp. SherDot2 0.45 MPMX19_03940 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.42 MPMX19_01339 Cystathionine beta-lyase MetC low > 112
Azospirillum brasilense Sp245 0.45 AZOBR_RS22285 3-methylcrotonyl-CoA carboxylase subunit alpha 0.45 AZOBR_RS08650 cystathionine beta-lyase
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS10460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.38 RALBFv3_RS20555 cystathionine beta-lyase low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS03120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.38 UW163_RS18620 cystathionine beta-lyase
Ralstonia solanacearum PSI07 0.44 RPSI07_RS22860 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.39 RPSI07_RS02185 cystathionine beta-lyase low > 81
Magnetospirillum magneticum AMB-1 0.43 AMB_RS03465 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.48 AMB_RS06585 cystathionine beta-lyase low > 64
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS06260 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.42 ABZR87_RS11250 cystathionine beta-lyase low > 80
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS26895 3-methylcrotonyl-CoA carboxylase 0.38 RR42_RS31610 cystathionine beta-lyase low > 128
Ralstonia solanacearum GMI1000 0.43 RS_RS01300 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.34 RS_RS08260 cystathionine beta-lyase low > 80
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.39 Psyr_0607 cystathionine beta-lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.39 Psyr_0607 cystathionine beta-lyase low > 86
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_20335 3-methylcrotonyl-CoA carboxylase 0.46 AO353_24330 cystathionine beta-lyase low > 101
Acinetobacter baumannii LAC-4 0.43 RR41_RS11115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.24 RR41_RS02145 PLP-dependent transferase low > 55
Agrobacterium fabrum C58 0.43 Atu3479 3-methylcrotonyl-CoA carboxylase subunit alpha 0.43 Atu1575 cystathionine beta lyase low > 89
Pseudomonas sp. SVBP6 0.43 COO64_RS24740 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.45 COO64_RS09240 metC cystathionine beta-lyase low > 93
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS23460 3-methylcrotonyl-CoA carboxylase subunit alpha 0.35 HSERO_RS14995 cystathionine beta-lyase low > 78
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS12855 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.37 QEN71_RS22165 cystathionine beta-lyase low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS23275 3-methylcrotonyl-CoA carboxylase subunit alpha 0.35 BPHYT_RS09190 cystathionine beta-lyase low > 109
Xanthobacter sp. DMC5 0.42 GFF3791 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.48 GFF1018 Cystathionine beta-lyase MetC
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3016 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.26 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8)
Acinetobacter radioresistens SK82 0.41 MPMX26_00629 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.24 MPMX26_02724 Cystathionine beta-lyase
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_01343 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.36 H281DRAFT_00859 cystathionine beta-lyase low > 103
Castellaniella sp019104865 MT123 0.41 ABCV34_RS12350 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.34 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein low > 48
Phaeobacter inhibens DSM 17395 0.39 PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha 0.27 PGA1_c16720 putative pyridoxal phosphate-dependent transferase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1711 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.42 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) low > 90
Variovorax sp. OAS795 0.38 ABID97_RS25115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.41 ABID97_RS22430 cystathionine beta-lyase low > 91
Variovorax sp. SCN45 0.38 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.41 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) low > 127
Sinorhizobium meliloti 1021 0.38 SM_b21124 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.44 SMc02117 cystathionine beta-lyase low > 103
Rhodopseudomonas palustris CGA009 0.37 TX73_013120 acetyl-CoA carboxylase biotin carboxylase subunit 0.47 TX73_013235 cystathionine beta-lyase low > 86
Bosea sp. OAE506 0.36 ABIE41_RS14850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.33 ABIE41_RS01480 cystathionine beta-lyase low > 77
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_4056 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.53 Ga0059261_1388 cystathionine beta-lyase, bacterial low > 68
Rhodospirillum rubrum S1H 0.36 Rru_A1941 acyl-CoA carboxylase alpha chain (NCBI) 0.46 Rru_A1613 Cystathionine beta-lyase (NCBI) low > 58
Rhizobium sp. OAE497 0.36 ABIE40_RS20775 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.44 ABIE40_RS08820 cystathionine beta-lyase low > 107
Sphingobium sp. HT1-2 0.36 GFF4876 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.52 GFF585 Cystathionine beta-lyase (EC 4.4.1.8) low > 95
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.38 CCNA_01491 cystathionine beta-lyase low > 67
Caulobacter crescentus NA1000 0.36 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.38 CCNA_01491 cystathionine beta-lyase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS03810 biotin carboxylase N-terminal domain-containing protein 0.31 A4249_RS05585 cystathionine beta-lyase low > 48

Not shown: 33 genomes with orthologs for SO1894 only; 30 genomes with orthologs for SO2191 only