Conservation of cofitness between b0512 and b3822 in Escherichia coli BW25113

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0512 allB allantoinase (NCBI) 1.0 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.16 12
Escherichia coli ECOR38 1.00 HEPCGN_06540 allB allantoinase 1.00 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ low > 85
Escherichia coli BL21 1.00 ECD_00462 allantoinase 1.00 ECD_03701 ATP-dependent DNA helicase low > 60
Escherichia fergusonii Becca 0.99 EFB2_03550 Allantoinase 1.00 EFB2_04815 ATP-dependent DNA helicase RecQ low > 86
Escherichia coli ECOR27 0.99 NOLOHH_00885 allB allantoinase 1.00 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ low > 57
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02975 allantoinase AllB 1.00 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 52
Escherichia coli ECRC62 0.99 BNILDI_22315 allB allantoinase 1.00 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03169 Allantoinase 1.00 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4428 Allantoinase (EC 3.5.2.5) 0.95 GFF248 ATP-dependent DNA helicase RecQ low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS07015 cyclic amidohydrolase 0.92 BWI76_RS01245 DNA helicase RecQ low > 92
Rahnella sp. WP5 0.81 EX31_RS04570 allantoinase AllB 0.81 EX31_RS15210 ATP-dependent DNA helicase RecQ low > 89
Magnetospirillum magneticum AMB-1 0.23 AMB_RS06420 dihydroorotase 0.42 AMB_RS21505 DNA helicase RecQ — —
Rhodospirillum rubrum S1H 0.22 Rru_A2936 Dihydroorotase multifunctional complex type (NCBI) 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_2410 dihydroorotase, multifunctional complex type 0.37 Ga0059261_2261 ATP-dependent DNA helicase RecQ — —
Rhodopseudomonas palustris CGA009 0.21 TX73_005495 dihydroorotase 0.42 TX73_025080 DNA helicase RecQ — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_00392 dihydroorotase 0.33 CCNA_03578 ATP-dependent DNA helicase recQ low > 67
Caulobacter crescentus NA1000 0.21 CCNA_00392 dihydroorotase 0.33 CCNA_03578 ATP-dependent DNA helicase recQ low > 66
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS08760 dihydroorotase 0.44 ABZR86_RS19925 DNA helicase RecQ — —
Fusobacterium nucleatum SB010 0.19 HUW76_08760 dihydroorotase 0.34 HUW76_07235 DNA helicase RecQ low > 35
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS04650 dihydroorotase 0.42 HMPREF1181_RS14110 DNA helicase RecQ low > 56
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS09470 dihydroorotase 0.36 A4249_RS14575 DNA helicase RecQ — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_14740 dihydroorotase 0.45 CA264_07560 DNA helicase RecQ low > 74
Bacteroides thetaiotaomicron VPI-5482 0.19 BT0250 dihydroorotase (DHOase) (NCBI ptt file) 0.41 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00399 amidohydrolase family protein 0.41 BACOVA_04594 ATP-dependent DNA helicase RecQ — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS09205 dihydroorotase 0.44 ABZR88_RS20865 DNA helicase RecQ — —
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS11365 dihydroorotase 0.44 ABI39_RS10235 DNA helicase RecQ — —
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.2303.1 Dihydroorotase (EC 3.5.2.3) 0.42 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ — —
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS00745 dihydroorotase 0.41 HMPREF1078_RS01195 DNA helicase RecQ — —
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS03390 dihydroorotase 0.38 CA265_RS08905 DNA helicase RecQ — —
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS15395 dihydroorotase 0.44 HMPREF1058_RS14585 DNA helicase RecQ low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_0748 dihydroorotase, multifunctional complex type 0.43 Echvi_0784 ATP-dependent DNA helicase RecQ — —
Lysobacter sp. OAE881 0.16 ABIE51_RS13460 dihydroorotase 0.41 ABIE51_RS05145 DNA helicase RecQ — —
Ralstonia solanacearum PSI07 0.15 RPSI07_RS20630 dihydroorotase 0.41 RPSI07_RS10025 DNA helicase RecQ — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS12630 dihydroorotase 0.41 RALBFv3_RS07220 DNA helicase RecQ — —
Ralstonia solanacearum UW163 0.15 UW163_RS00935 dihydroorotase 0.41 UW163_RS06400 DNA helicase RecQ — —
Ralstonia solanacearum GMI1000 0.15 RS_RS03415 dihydroorotase 0.41 RS_RS15155 DNA helicase RecQ — —
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS08630 dihydroorotase 0.42 ABZR87_RS02880 DNA helicase RecQ low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS02340 dihydroorotase 0.45 HSERO_RS02465 ATP-dependent DNA helicase RecQ low > 78
Serratia liquefaciens MT49 0.13 IAI46_10690 amidohydrolase family protein 0.81 IAI46_00770 ATP-dependent DNA helicase RecQ low > 86
Variovorax sp. OAS795 0.13 ABID97_RS24655 dihydroorotase 0.43 ABID97_RS03395 DNA helicase RecQ low > 91
Pseudomonas sp. S08-1 0.12 OH686_10945 Dihydroorotase 0.43 OH686_20670 ATP-dependent DNA helicase RecQ — —
Pseudomonas stutzeri RCH2 0.11 Psest_0290 dihydroorotase, multifunctional complex type 0.44 Psest_1869 ATP-dependent DNA helicase RecQ — —
Marinobacter adhaerens HP15 0.11 HP15_3506 dihydroorotase, multifunctional complex type 0.44 HP15_1718 ATP-dependent DNA helicase RecQ low > 73
Pseudomonas sp. RS175 0.11 PFR28_04238 Dihydroorotase-like protein 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ — —
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_0481 dihydroorotase 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_0481 dihydroorotase 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ — —
Dechlorosoma suillum PS 0.10 Dsui_0597 dihydroorotase, multifunctional complex type 0.44 Dsui_3092 ATP-dependent DNA helicase RecQ — —

Not shown: 5 genomes with orthologs for b0512 only; 49 genomes with orthologs for b3822 only