Conservation of cofitness between b3365 and b1223 in Escherichia coli BW25113

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3365 nirB nitrite reductase, large subunit, NAD(P)H-binding (NCBI) 1.0 b1223 narK nitrate/nitrite transporter (NCBI) 0.35 2
Escherichia coli BL21 1.00 ECD_03216 nitrite reductase, large subunit, NAD(P)H-binding 1.00 ECD_01201 nitrate/nitrite transporter low > 60
Escherichia coli ECRC101 1.00 MCAODC_07725 nirB NADPH-nitrite reductase large subunit 1.00 MCAODC_21725 narK nitrate transporter NarK — —
Escherichia coli ECRC98 1.00 JDDGAC_20825 nirB NADPH-nitrite reductase large subunit 1.00 JDDGAC_06040 narK nitrate transporter NarK — —
Escherichia coli ECRC62 1.00 BNILDI_02525 nirB NADPH-nitrite reductase large subunit 1.00 BNILDI_18670 narK nitrate transporter NarK — —
Escherichia coli ECRC102 1.00 NIAGMN_14965 nirB NADPH-nitrite reductase large subunit 1.00 NIAGMN_27700 narK nitrate transporter NarK — —
Escherichia coli ECRC101 1.00 OKFHMN_17195 nirB NADPH-nitrite reductase large subunit 1.00 OKFHMN_28535 narK nitrate transporter NarK — —
Escherichia coli ECRC99 1.00 KEDOAH_10945 nirB NADPH-nitrite reductase large subunit 1.00 KEDOAH_25530 narK nitrate transporter NarK — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19270 NADPH-nitrite reductase large subunit 1.00 ECOLIN_RS07390 nitrate transporter NarK low > 52
Escherichia coli ECOR27 1.00 NOLOHH_08995 nirB NADPH-nitrite reductase large subunit 1.00 NOLOHH_20520 narK nitrate transporter NarK — —
Escherichia fergusonii Becca 1.00 EFB2_00457 Nitrite reductase [NAD(P)H] 1.00 EFB2_02702 Nitrate/nitrite transporter NarK low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00337 Nitrite reductase [NAD(P)H] 1.00 OHPLBJKB_02460 Nitrate/nitrite transporter NarK low > 73
Escherichia coli ECOR38 1.00 HEPCGN_16025 nirB NADPH-nitrite reductase large subunit 1.00 HEPCGN_24995 narK nitrate transporter NarK low > 85
Klebsiella michiganensis M5al 0.95 BWI76_RS26040 nitrite reductase large subunit 0.89 BWI76_RS17340 NarK family nitrate/nitrite MFS transporter low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF3704 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.92 GFF2763 Nitrate/nitrite transporter low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4162 nitrite reductase [NAD(P)H], large subunit 0.89 EX28DRAFT_0850 nitrite extrusion protein (nitrite facilitator) low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_04269 Nitrite reductase [NAD(P)H] 0.89 MPMX20_02616 Nitrate/nitrite transporter NarK 0.20 40
Serratia liquefaciens MT49 0.84 IAI46_23655 nitrite reductase large subunit 0.78 IAI46_15600 NarK family nitrate/nitrite MFS transporter low > 86
Pectobacterium carotovorum WPP14 0.84 HER17_RS01845 nitrite reductase large subunit NirB 0.67 HER17_RS09770 NarK family nitrate/nitrite MFS transporter low > 75
Rahnella sp. WP5 0.83 EX31_RS04670 nitrite reductase large subunit 0.75 EX31_RS06560 NarK family nitrate/nitrite MFS transporter low > 89
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS31785 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.53 RR42_RS08825 nitrate/nitrite transporter NarK low > 128
Paraburkholderia graminis OAS925 0.63 ABIE53_002205 nitrite reductase (NADH) large subunit 0.44 ABIE53_005347 NNP family nitrate/nitrite transporter-like MFS transporter low > 113
Ralstonia solanacearum PSI07 0.63 RPSI07_RS05610 nitrite reductase large subunit 0.50 RPSI07_RS06710 NarK family nitrate/nitrite MFS transporter low > 81
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_00967 assimilatory nitrite reductase (NAD(P)H) large subunit precursor (EC 1.7.1.4) 0.06 H281DRAFT_00968 MFS transporter, NNP family, nitrate/nitrite transporter — —
Ralstonia solanacearum GMI1000 0.62 RS_RS23035 nitrite reductase large subunit 0.48 RS_RS21810 NarK family nitrate/nitrite MFS transporter low > 80
Ralstonia solanacearum UW163 0.62 UW163_RS21135 nitrite reductase large subunit 0.49 UW163_RS18090 NarK family nitrate/nitrite MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS17995 nitrite reductase large subunit 0.49 RALBFv3_RS16735 NarK family nitrate/nitrite MFS transporter low > 76
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS14535 nitrite reductase 0.48 HSERO_RS18160 nitrate transporter low > 78
Acidovorax sp. GW101-3H11 0.61 Ac3H11_2637 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.49 Ac3H11_4491 Nitrate/nitrite transporter low > 79
Pseudomonas sp. S08-1 0.57 OH686_20575 Nitrite reductase [NAD(P)H] large subunit 0.08 OH686_00515 Nitrate transporter NasA low > 80
Pseudomonas putida KT2440 0.56 PP_1705 nitrite reductase [NAD(P)H] large subunit 0.07 PP_2092 Nitrate transporter 0.77 3
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_1114 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.58 Pf6N2E2_728 Nitrate/nitrite transporter low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_3099 assimilatory nitrite reductase (NAD(P)H) large subunit precursor 0.09 Psyr_2102 Nitrate transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_3099 assimilatory nitrite reductase (NAD(P)H) large subunit precursor 0.09 Psyr_2102 Nitrate transporter low > 86
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_26200 nitrite reductase 0.58 AO356_25200 nitrate/nitrite transporter NarK low > 104
Pseudomonas sp. RS175 0.56 PFR28_01856 Nitrite reductase [NAD(P)H] 0.57 PFR28_01631 Nitrate/nitrite transporter NarK low > 88
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_5042 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.58 Pf1N1B4_5736 Nitrate/nitrite transporter low > 87
Castellaniella sp019104865 MT123 0.55 ABCV34_RS06890 nitrite reductase large subunit NirB 0.47 ABCV34_RS15155 NarK family nitrate/nitrite MFS transporter 0.38 16
Pseudomonas simiae WCS417 0.55 PS417_14730 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.59 PS417_15725 nitrate/nitrite transporter NarK low > 88
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS16715 nitrite reductase large subunit 0.09 PFLU_RS22580 NarK/NasA family nitrate transporter 0.89 1
Pseudomonas fluorescens SBW25 0.55 PFLU_RS16715 nitrite reductase large subunit 0.09 PFLU_RS22580 NarK/NasA family nitrate transporter low > 109
Mycobacterium tuberculosis H37Rv 0.45 Rv0252 Probable nitrite reductase [NAD(P)H] large subunit [FAD flavoprotein] NirB 0.34 Rv0267 Probable integral membrane nitrite extrusion protein NarU (nitrite facilitator) low > 58
Sinorhizobium meliloti 1021 0.28 SM_b20984 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.10 SM_b20436 nitrate transporter protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3665 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.28 GFF5825 Nitrate/nitrite transporter low > 90
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.2712.1 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.06 Xcc-8004.2713.1 Nitrate/nitrite transporter low > 74
Caulobacter crescentus NA1000 0.26 CCNA_00651 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.10 CCNA_00650 nitrate transporter (from data) 0.89 2
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_00651 nitrite reductase (NAD(P)H) catalytic subunit 0.10 CCNA_00650 MFS superfamily nitrate/nitrite transporter NarK low > 67
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4101 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.11 PfGW456L13_4099 Nitrate/nitrite transporter low > 87
Variovorax sp. OAS795 0.26 ABID97_RS16020 nitrite reductase large subunit NirB 0.11 ABID97_RS20580 MFS transporter — —
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_00805 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.57 AO353_22090 nitrate/nitrite transporter NarK low > 101

Not shown: 19 genomes with orthologs for b3365 only; 5 genomes with orthologs for b1223 only