Conservation of cofitness between b1276 and b1185 in Escherichia coli BW25113

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1276 acnA aconitate hydratase (NCBI) 1.0 b1185 dsbB reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) 0.19 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02406 Aconitate hydratase A 1.00 OHPLBJKB_02504 Disulfide bond formation protein B low > 73
Escherichia coli BL21 1.00 ECD_01253 aconitate hydratase 1; aconitase A 1.00 ECD_01160 oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I low > 60
Escherichia coli ECRC62 1.00 BNILDI_18390 acnA aconitate hydratase AcnA 1.00 BNILDI_18910 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECOR27 1.00 NOLOHH_20240 acnA aconitate hydratase AcnA 1.00 NOLOHH_20745 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECOR38 1.00 HEPCGN_25625 acnA aconitate hydratase AcnA 1.00 HEPCGN_24730 dsbB disulfide bond formation protein DsbB low > 85
Escherichia coli ECRC101 1.00 OKFHMN_02575 acnA aconitate hydratase AcnA 1.00 OKFHMN_28270 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC102 1.00 NIAGMN_26745 acnA aconitate hydratase AcnA 1.00 NIAGMN_27950 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC98 1.00 JDDGAC_05120 acnA aconitate hydratase AcnA 1.00 JDDGAC_06240 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC99 1.00 KEDOAH_26190 acnA aconitate hydratase AcnA 1.00 KEDOAH_25285 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC101 0.99 MCAODC_15690 acnA aconitate hydratase AcnA 1.00 MCAODC_21900 dsbB disulfide bond formation protein DsbB — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07705 aconitate hydratase AcnA 0.99 ECOLIN_RS07165 disulfide bond formation protein DsbB — —
Escherichia fergusonii Becca 0.99 EFB2_02649 Aconitate hydratase A 0.99 EFB2_02747 Disulfide bond formation protein B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF2709 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) 0.79 GFF2808 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 78
Enterobacter sp. TBS_079 0.90 MPMX20_02499 Aconitate hydratase A 0.83 MPMX20_02703 Disulfide bond formation protein B — —
Enterobacter asburiae PDN3 0.90 EX28DRAFT_0949 aconitate hydratase 1 0.83 EX28DRAFT_0762 Disulfide bond formation protein DsbB — —
Klebsiella michiganensis M5al 0.88 BWI76_RS11940 aconitate hydratase 1 0.85 BWI76_RS17755 disulfide bond formation protein B — —
Pantoea sp. MT58 0.80 IAI47_09250 aconitate hydratase AcnA 0.68 IAI47_08875 disulfide bond formation protein DsbB — —
Serratia liquefaciens MT49 0.79 IAI46_13950 aconitate hydratase AcnA 0.69 IAI46_14485 disulfide bond formation protein DsbB — —
Rahnella sp. WP5 0.77 EX31_RS09885 aconitate hydratase AcnA 0.66 EX31_RS10515 disulfide bond formation protein DsbB low > 89
Pectobacterium carotovorum WPP14 0.75 HER17_RS09315 aconitate hydratase AcnA 0.68 HER17_RS11225 disulfide bond formation protein DsbB low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS12555 aconitate hydratase AcnA 0.74 DDA3937_RS11185 disulfide bond formation protein DsbB low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS13065 aconitate hydratase AcnA 0.74 DZA65_RS11565 disulfide bond formation protein DsbB low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS12610 aconitate hydratase AcnA 0.74 HGI48_RS11220 disulfide bond formation protein DsbB low > 71
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2301 Aconitate hydratase (EC 4.2.1.3) 0.14 Pf6N2E2_5316 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 103
Pseudomonas sp. RS175 0.68 PFR28_01099 Aconitate hydratase A 0.14 PFR28_00241 Disulfide bond formation protein B low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3404 aconitase 0.16 Psyr_1140 Disulfide bond formation protein DsbB low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3404 aconitase 0.16 Psyr_1140 Disulfide bond formation protein DsbB low > 86
Pseudomonas simiae WCS417 0.68 PS417_07515 aconitate hydratase 0.16 PS417_23395 disulfide bond formation protein B — —
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS07595 aconitate hydratase AcnA 0.15 PFLU_RS25225 disulfide bond formation protein B low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS07595 aconitate hydratase AcnA 0.15 PFLU_RS25225 disulfide bond formation protein B low > 109
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4052 Aconitate hydratase (EC 4.2.1.3) 0.17 PfGW456L13_860 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 87
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3888 Aconitate hydratase (EC 4.2.1.3) 0.15 Pf1N1B4_2189 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 87
Pseudomonas sp. S08-1 0.67 OH686_02100 aconitate hydratase 1 0.16 OH686_13920 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 80
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_00565 aconitate hydratase 0.15 AO353_15445 disulfide bond formation protein B low > 101
Acinetobacter radioresistens SK82 0.65 MPMX26_00480 Aconitate hydratase A 0.15 MPMX26_02949 Disulfide bond formation protein B — —
Alteromonas macleodii MIT1002 0.57 MIT1002_00380 Aconitate hydratase 1 0.36 MIT1002_02581 Disulfide oxidoreductase low > 70
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0799 aconitate hydratase 1 0.20 B158DRAFT_0682 Disulfide bond formation protein DsbB low > 40
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3382 Aconitate hydratase (EC 4.2.1.3) 0.18 GFF4299 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 90
Ralstonia solanacearum PSI07 0.50 RPSI07_RS14625 aconitate hydratase AcnA 0.17 RPSI07_RS17265 disulfide bond formation protein B — —
Ralstonia solanacearum UW163 0.50 UW163_RS11035 aconitate hydratase AcnA 0.17 UW163_RS13545 disulfide bond formation protein B — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS14605 aconitate hydratase AcnA 0.19 ABZR87_RS11675 disulfide bond formation protein B low > 80
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS02690 aconitate hydratase AcnA 0.17 RALBFv3_RS00215 disulfide bond formation protein B — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_06606 aconitase 0.14 H281DRAFT_03960 disulfide bond formation protein DsbB — —
Ralstonia solanacearum GMI1000 0.50 RS_RS10065 aconitate hydratase AcnA 0.17 RS_RS06885 disulfide bond formation protein B — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS33980 aconitate hydratase 0.15 BPHYT_RS15075 dihydrokaempferol 4-reductase low > 109
Variovorax sp. OAS795 0.49 ABID97_RS08550 aconitate hydratase AcnA 0.16 ABID97_RS15590 disulfide bond formation protein B low > 91
Dechlorosoma suillum PS 0.48 Dsui_2347 aconitate hydratase 1 0.14 Dsui_1533 disulfide bond formation protein DsbB low > 51
Acidovorax sp. GW101-3H11 0.48 Ac3H11_1140 2-methylisocitrate dehydratase (EC 4.2.1.99) (from data) 0.19 Ac3H11_908 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation — —
Variovorax sp. SCN45 0.48 GFF3909 Aconitate hydratase (EC 4.2.1.3) 0.19 GFF1291 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation — —
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_06745 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.46 CSW01_09520 disulfide bond formation protein B low > 62
Shewanella loihica PV-4 0.40 Shew_1822 aconitate hydratase (RefSeq) 0.38 Shew_2176 disulphide bond formation protein DsbB (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_3296 aconitate hydratase (RefSeq) 0.38 Sama_1926 disulfide bond formation protein B (RefSeq) low > 62
Shewanella sp. ANA-3 0.40 Shewana3_3827 aconitate hydratase (RefSeq) 0.38 Shewana3_1633 disulfide bond formation protein B (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) 0.38 SO2887 dsbB disulfide bond formation protein b (NCBI ptt file) low > 76

Not shown: 39 genomes with orthologs for b1276 only; 1 genomes with orthologs for b1185 only