Conservation of cofitness between b1095 and b0948 in Escherichia coli BW25113

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1095 fabF 3-oxoacyl-(acyl carrier protein) synthase (NCBI) 1.0 b0948 ycbY predicted methyltransferase (NCBI) 0.34 12
Escherichia coli BL21 1.00 ECD_01091 3-oxoacyl-[acyl-carrier-protein] synthase II 1.00 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent — —
Escherichia fergusonii Becca 1.00 EFB2_02880 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.99 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06325 beta-ketoacyl-ACP synthase II 0.99 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC101 1.00 MCAODC_22925 fabF beta-ketoacyl-ACP synthase II 1.00 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC101 1.00 OKFHMN_03565 fabF beta-ketoacyl-ACP synthase II 1.00 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC102 1.00 NIAGMN_24265 fabF beta-ketoacyl-ACP synthase II 1.00 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECOR38 1.00 HEPCGN_23915 fabF beta-ketoacyl-ACP synthase II 1.00 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 85
Escherichia coli ECRC98 1.00 JDDGAC_07225 fabF beta-ketoacyl-ACP synthase II 0.99 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC62 1.00 BNILDI_19255 fabF beta-ketoacyl-ACP synthase II 1.00 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC99 1.00 KEDOAH_24190 fabF beta-ketoacyl-ACP synthase II 1.00 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECOR27 1.00 NOLOHH_21095 fabF beta-ketoacyl-ACP synthase II 1.00 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02571 3-oxoacyl-[acyl-carrier-protein] synthase 2 1.00 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1834 beta-ketoacyl-acyl-carrier-protein synthase II 0.88 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS11100 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.88 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase low > 92
Enterobacter sp. TBS_079 0.90 MPMX20_01775 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.88 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3377 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) 0.92 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 78
Pectobacterium carotovorum WPP14 0.89 HER17_RS08660 beta-ketoacyl-ACP synthase II 0.77 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Pantoea sp. MT58 0.88 IAI47_12060 beta-ketoacyl-ACP synthase II 0.76 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 76
Rahnella sp. WP5 0.88 EX31_RS24445 beta-ketoacyl-ACP synthase II 0.76 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 89
Serratia liquefaciens MT49 0.88 IAI46_09800 beta-ketoacyl-ACP synthase II 0.77 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 86
Dickeya dianthicola ME23 0.86 DZA65_RS13645 beta-ketoacyl-ACP synthase II 0.75 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Dickeya dadantii 3937 0.86 DDA3937_RS13110 beta-ketoacyl-ACP synthase II 0.75 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS13175 beta-ketoacyl-ACP synthase II 0.75 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 71
Erwinia tracheiphila SCR3 0.84 LU632_RS14810 fabF beta-ketoacyl-ACP synthase II 0.76 LU632_RS09965 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_10085 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.59 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L low > 62
Shewanella amazonensis SB2B 0.78 Sama_1978 3-oxoacyl-(acyl-carrier-protein) synthase II (RefSeq) 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.75 Shew_1605 beta-ketoacyl synthase (RefSeq) 0.48 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_2557 3-oxoacyl-[acyl-carrier-protein] synthase II (RefSeq) 0.48 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.74 SO2774 fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase II (NCBI ptt file) 0.49 SO1851 conserved hypothetical protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_1751 beta-ketoacyl-acyl-carrier-protein synthase II 0.39 B158DRAFT_2229 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52) low > 40
Alteromonas macleodii MIT1002 0.71 MIT1002_01735 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.45 MIT1002_02036 Ribosomal RNA large subunit methyltransferase K/L — —
Pseudomonas sp. S08-1 0.70 OH686_22150 beta-ketoacyl-acyl-carrier-protein synthase II 0.43 OH686_03110 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase low > 80
Pseudomonas putida KT2440 0.68 PP_1916 beta-ketoacyl-ACP synthase II / 3-oxo-cis-vaccenoyl-[acp] synthase / FabF / KASII / acetoacetyl-[acp] synthase 0.43 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase — —
Pseudomonas stutzeri RCH2 0.68 Psest_1690 beta-ketoacyl-acyl-carrier-protein synthase II 0.44 Psest_1949 Predicted N6-adenine-specific DNA methylase — —
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS23045 beta-ketoacyl-ACP synthase II 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS23045 beta-ketoacyl-ACP synthase II 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 109
Pseudomonas sp. RS175 0.68 PFR28_03008 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.40 PFR28_01055 Ribosomal RNA large subunit methyltransferase K/L — —
Pseudomonas simiae WCS417 0.68 PS417_21430 3-oxoacyl-ACP synthase 0.41 PS417_20930 50S rRNA methyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_20175 3-oxoacyl-ACP synthase 0.40 AO356_02605 50S rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_01355 3-oxoacyl-ACP synthase 0.40 AO353_00775 50S rRNA methyltransferase low > 101
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS06160 beta-ketoacyl-ACP synthase II 0.41 ABZR86_RS21235 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5954 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.40 Pf6N2E2_2346 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_2107 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.41 PfGW456L13_4094 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_449 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.40 Pf1N1B4_3844 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) — —
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_05725 fabF beta-ketoacyl-ACP synthase II 0.40 OKGIIK_03440 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS01175 beta-ketoacyl-ACP synthase II 0.41 LRK54_RS14600 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Rhodanobacter denitrificans MT42 0.62 LRK55_RS00950 beta-ketoacyl-ACP synthase II 0.41 LRK55_RS14315 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.3993.1 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.39 Xcc-8004.3335.1 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) — —
Lysobacter sp. OAE881 0.55 ABIE51_RS13935 beta-ketoacyl-ACP synthase II 0.37 ABIE51_RS14475 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —

Not shown: 47 genomes with orthologs for b1095 only; 2 genomes with orthologs for b0948 only