Conservation of cofitness between b0779 and b0577 in Escherichia coli BW25113

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0779 uvrB excinuclease ABC subunit B (NCBI) 1.0 b0577 ybdG predicted mechanosensitive channel (NCBI) 0.46 13
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04150 excinuclease ABC subunit UvrB 1.00 ECOLIN_RS03155 mechanosensitive ion channel YbdG — —
Escherichia coli ECRC98 1.00 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB 1.00 JDDGAC_11320 ybdG mechanosensitive ion channel YbdG low > 86
Escherichia coli ECRC102 1.00 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB 1.00 NIAGMN_05730 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECRC100 1.00 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB 1.00 OKFHMN_07675 ybdG mechanosensitive ion channel YbdG low > 80
Escherichia coli BL21 1.00 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component 1.00 ECD_00538 mechanosensitive channel protein, miniconductance low > 61
Escherichia coli ECOR27 1.00 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB 1.00 NOLOHH_24055 ybdG mechanosensitive ion channel YbdG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02934 UvrABC system protein B 1.00 OHPLBJKB_03132 Miniconductance mechanosensitive channel YbdG low > 73
Escherichia coli ECRC62 1.00 BNILDI_21020 uvrB excinuclease ABC subunit UvrB 1.00 BNILDI_22065 ybdG mechanosensitive ion channel YbdG low > 75
Escherichia coli ECOR38 1.00 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB 1.00 HEPCGN_00615 ybdG mechanosensitive ion channel YbdG low > 87
Escherichia coli ECRC101 1.00 MCAODC_25595 uvrB excinuclease ABC subunit UvrB 1.00 MCAODC_26890 ybdG mechanosensitive ion channel YbdG low > 87
Escherichia coli ECRC99 1.00 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB 1.00 KEDOAH_20295 ybdG mechanosensitive ion channel YbdG — —
Escherichia fergusonii Becca 1.00 EFB2_03326 UvrABC system protein B 1.00 EFB2_03517 Miniconductance mechanosensitive channel YbdG low > 86
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2211 Excinuclease ABC subunit B 0.85 EX28DRAFT_2431 Small-conductance mechanosensitive channel low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01408 UvrABC system protein B 0.84 MPMX20_01129 Miniconductance mechanosensitive channel YbdG low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS08785 excinuclease ABC subunit B 0.83 BWI76_RS07440 miniconductance mechanosensitive channel low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF675 Excinuclease ABC subunit B 0.90 GFF4472 Uncharacterized protein ybdG low > 78
Erwinia tracheiphila SCR3 0.90 LU632_RS09160 uvrB excinuclease ABC subunit B 0.53 LU632_RS06755 mechanosensitive ion channel family protein low > 74
Erwinia amylovora T8 0.89 OLJFJH_16735 excinuclease ABC subunit UvrB 0.72 OLJFJH_11020 miniconductance mechanosensitive channel low > 58
Pantoea sp. MT58 0.89 IAI47_13505 excinuclease ABC subunit B 0.28 IAI47_10645 mechanosensitive ion channel low > 76
Serratia liquefaciens MT49 0.88 IAI46_06550 excinuclease ABC subunit B 0.60 IAI46_04810 mechanosensitive ion channel low > 86
Pectobacterium carotovorum WPP14 0.88 HER17_RS13420 excinuclease ABC subunit B 0.58 HER17_RS16010 mechanosensitive ion channel low > 75
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_05185 excinuclease ABC subunit UvrB 0.54 CSW01_01370 mechanosensitive ion channel family protein low > 62
Shewanella oneidensis MR-1 0.75 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) 0.43 SO0121 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_2166 excinuclease ABC subunit B (RefSeq) 0.43 Shewana3_0117 MscS mechanosensitive ion channel (RefSeq) low > 73
Shewanella amazonensis SB2B 0.74 Sama_1828 excinuclease ABC subunit B (RefSeq) 0.43 Sama_3632 putative small-conductance mechanosensitive channel (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.74 MIT1002_01261 Excinuclease ABC subunit B 0.39 MIT1002_03422 Miniconductance mechanosensitive channel low > 70
Shewanella loihica PV-4 0.74 Shew_2064 excinuclease ABC subunit B (RefSeq) 0.42 Shew_3752 MscS mechanosensitive ion channel (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1974 Excinuclease ABC subunit B 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1974 Excinuclease ABC subunit B 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_21335 excinuclease ABC subunit B 0.37 AO356_04215 mechanosensitive ion channel protein MscS low > 104
Pseudomonas sp. RS175 0.71 PFR28_02837 UvrABC system protein B 0.39 PFR28_00755 Miniconductance mechanosensitive channel YbdG low > 88
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_52 Excinuclease ABC subunit B 0.36 Pf6N2E2_2677 Small-conductance mechanosensitive channel low > 103
Pseudomonas aeruginosa PA14 0.71 IKLFDK_15985 excinuclease ABC subunit UvrB 0.36 IKLFDK_17800 mechanosensitive ion channel protein MscS low > 101
Pseudomonas sp. DMC3 0.71 GFF774 UvrABC system protein B 0.38 GFF2354 Miniconductance mechanosensitive channel YbdG low > 89
Pseudomonas sp. SVBP6 0.71 COO64_RS05730 uvrB excinuclease ABC subunit UvrB 0.37 COO64_RS21935 mechanosensitive ion channel family protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_20545 excinuclease ABC subunit B 0.38 AO353_18300 mechanosensitive ion channel protein MscS low > 101
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_26 Excinuclease ABC subunit B 0.38 Pf1N1B4_544 Small-conductance mechanosensitive channel low > 87
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS20655 excinuclease ABC subunit B 0.38 PFLU_RS22200 mechanosensitive ion channel family protein 0.27 48
Pseudomonas fluorescens SBW25 0.70 PFLU_RS20655 excinuclease ABC subunit B 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Pseudomonas sp. BP01 0.70 JOY50_RS16715 uvrB excinuclease ABC subunit UvrB 0.38 JOY50_RS01235 mechanosensitive ion channel family protein low > 84
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_3959 Excinuclease ABC subunit B 0.39 PfGW456L13_4452 Small-conductance mechanosensitive channel low > 87
Pseudomonas stutzeri RCH2 0.70 Psest_1296 excinuclease ABC, B subunit 0.40 Psest_1281 Small-conductance mechanosensitive channel low > 67
Pseudomonas putida KT2440 0.70 PP_1974 excinuclease UvrABC protein B 0.38 PP_4533 mechanosensitive channel of miniconductance — —
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2341 Excinuclease ABC subunit B 0.58 B158DRAFT_2238 Small-conductance mechanosensitive channel low > 40
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS23870 excinuclease ABC subunit UvrB 0.27 QEN71_RS37970 mechanosensitive ion channel low > 153
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS06905 excinuclease ABC subunit B 0.29 BPHYT_RS30840 small mechanosensitive ion channel protein MscS low > 109
Acinetobacter radioresistens SK82 0.65 MPMX26_02142 UvrABC system protein B 0.37 MPMX26_01489 Miniconductance mechanosensitive channel YbdG — —
Parabacteroides merdae CL09T00C40 0.57 HMPREF1078_RS15855 excinuclease ABC subunit UvrB 0.39 HMPREF1078_RS02480 mechanosensitive ion channel low > 61
Cellulophaga baltica 18 0.55 M666_RS19015 excinuclease ABC subunit UvrB 0.32 M666_RS16035 mechanosensitive ion channel low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_19110 excinuclease ABC subunit B 0.36 CA264_02745 mechanosensitive ion channel protein MscS low > 74
Phocaeicola dorei CL03T12C01 0.52 ABI39_RS15300 excinuclease ABC subunit UvrB 0.36 ABI39_RS01685 mechanosensitive ion channel low > 72
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS15225 excinuclease ABC subunit UvrB 0.39 HMPREF1181_RS09075 mechanosensitive ion channel low > 56
Phocaeicola vulgatus CL09T03C04 0.52 HMPREF1058_RS01765 excinuclease ABC subunit UvrB 0.35 HMPREF1058_RS02435 mechanosensitive ion channel low > 67
Bacteroides ovatus ATCC 8483 0.51 BACOVA_03714 excinuclease ABC, B subunit 0.39 BACOVA_04843 transporter, small conductance mechanosensitive ion channel MscS family protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.51 BT0570 excinuclease ABC subunit B (NCBI ptt file) 0.40 BT4053 putative membrane transport protein (NCBI ptt file) low > 81

Not shown: 52 genomes with orthologs for b0779 only; 0 genomes with orthologs for b0577 only