| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A2251 | | extracellular solute-binding protein, family 3 (NCBI) | 1.0 | Rru_A3663 | | NAD-glutamate dehydrogenase (NCBI) | 0.63 | 8 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_09900 | | ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) | 0.39 | AO356_24705 | | NAD-glutamate dehydrogenase | 0.29 | 102 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_04914 | | ABC transporter arginine-binding protein 1 | 0.40 | PFR28_01602 | | NAD-specific glutamate dehydrogenase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_3856 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.39 | Pf6N2E2_634 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_0138 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | 0.41 | Psest_1944 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) | low | > 67 |
| Pseudomonas sp. S08-1 | 0.52 | OH686_14500 | | ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) | 0.41 | OH686_22265 | | NAD-specific glutamate dehydrogenase , large form | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_4912 | | amino acid ABC transporter substrate-binding protein, PAAT family | 0.39 | Psyr_1724 | | glutamate dehydrogenase (NAD) | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_11995 | | amino acid ABC transporter | 0.40 | AO353_22820 | | NAD-glutamate dehydrogenase | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_4912 | | amino acid ABC transporter substrate-binding protein, PAAT family | 0.39 | Psyr_1724 | | glutamate dehydrogenase (NAD) | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_377 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.39 | PfGW456L13_3298 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_1641 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.39 | Pf1N1B4_4643 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 87 |
| Pseudomonas putida KT2440 | 0.49 | PP_0282 | | L-arginine ABC transporter - periplasmic binding subunit | 0.40 | PP_2080 | | NAD-specific glutamate dehydrogenase | 0.18 | 53 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS01535 | | ABC transporter substrate-binding protein | 0.39 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS01535 | | ABC transporter substrate-binding protein | 0.39 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_01495 | | amino acid ABC transporter | 0.39 | PS417_15075 | | NAD-glutamate dehydrogenase | low | > 88 |
| Sinorhizobium meliloti 1021 | 0.41 | SMc00140 | | L-lysine ABC transporter, substrate-binding component (from data) | 0.34 | SMc04085 | | hypothetical protein | 0.33 | 31 |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_02976 | | Octopine-binding periplasmic protein | 0.52 | MPMX19_04621 | | NAD-specific glutamate dehydrogenase | low | > 112 |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_09330 | | ABC transporter substrate-binding protein | 0.40 | CSW01_07495 | | NAD-glutamate dehydrogenase | low | > 62 |
| Rhizobium sp. OAE497 | 0.39 | ABIE40_RS24950 | | ABC transporter substrate-binding protein | 0.34 | ABIE40_RS19120 | | NAD-glutamate dehydrogenase | low | > 107 |
| Azospirillum brasilense Sp245 | 0.38 | AZOBR_RS27130 | | polyamine ABC transporter substrate-binding protein | 0.52 | AZOBR_RS00190 | | L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) | low | > 97 |
| Agrobacterium fabrum C58 | 0.37 | Atu1879 | | ABC transporter, substrate binding protein (amino acid) | 0.34 | Atu2766 | | NAD-glutamate dehydrogenase | low | > 89 |
| Bosea sp. OAE506 | 0.35 | ABIE41_RS21180 | | transporter substrate-binding domain-containing protein | 0.37 | ABIE41_RS04780 | | NAD-glutamate dehydrogenase | low | > 77 |
| Marinobacter adhaerens HP15 | 0.34 | HP15_3031 | | L-arginine ABC transporter, periplasmic substrate-binding component ArtJ/HisJ/ArtI/AotJ/ArgT (from data) | 0.42 | HP15_2269 | | NAD-specific glutamate dehydrogenase | low | > 73 |
| Paraburkholderia sabiae LMG 24235 | 0.33 | QEN71_RS11350 | | ABC transporter substrate-binding protein | 0.43 | QEN71_RS20065 | | NAD-glutamate dehydrogenase | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.30 | ABIE53_005158 | | lysine/arginine/ornithine transport system substrate-binding protein | 0.44 | ABIE53_004113 | | glutamate dehydrogenase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_01522 | | amino acid ABC transporter substrate-binding protein, PAAT family | 0.44 | H281DRAFT_03183 | | glutamate dehydrogenase (NAD) | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS29525 | | ABC transporter substrate-binding protein | 0.44 | BPHYT_RS22475 | | NAD-glutamate dehydrogenase | — | — |
| Caulobacter crescentus NA1000 | 0.22 | CCNA_01508 | | cystine-binding protein | 0.38 | CCNA_00086 | | NAD-specific glutamate dehydrogenase GdhZ | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.22 | CCNA_01508 | | cystine-binding protein | 0.38 | CCNA_00086 | | NAD-specific glutamate dehydrogenase GdhZ | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS31745 | | ABC transporter permease | 0.45 | RR42_RS07270 | | NAD-glutamate dehydrogenase | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.19 | RPSI07_RS14115 | | glutamine ABC transporter substrate-binding protein GlnH | 0.43 | RPSI07_RS18780 | | NAD-glutamate dehydrogenase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.17 | RALBFv3_RS21335 | | amino acid ABC transporter substrate-binding protein | 0.43 | RALBFv3_RS20390 | | NAD-glutamate dehydrogenase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.17 | UW163_RS22480 | | amino acid ABC transporter substrate-binding protein | 0.43 | UW163_RS18785 | | NAD-glutamate dehydrogenase | — | — |
| Shewanella loihica PV-4 | 0.17 | Shew_3166 | | extracellular solute-binding protein (RefSeq) | 0.42 | Shew_1809 | | NAD-glutamate dehydrogenase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.14 | Shewana3_0882 | | extracellular solute-binding protein (RefSeq) | 0.41 | Shewana3_1785 | | glutamate dehydrogenase (NAD) (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.14 | SO1044 | | amino acid ABC transporter, periplasmic amino acid-binding protein (NCBI ptt file) | 0.41 | SO2593 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.10 | Xcc-8004.797.1 | | Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) | 0.41 | Xcc-8004.2182.1 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 74 |
Not shown: 38 genomes with orthologs for Rru_A2251 only; 13 genomes with orthologs for Rru_A3663 only