Conservation of cofitness between Rru_A3203 and Rru_A2616 in Rhodospirillum rubrum S1H

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A3203 ribonuclease R (NCBI) 1.0 Rru_A2616 Histone deacetylase superfamily (NCBI) 0.61 19
Magnetospirillum magneticum AMB-1 0.48 AMB_RS04465 ribonuclease R 0.61 AMB_RS14595 acetoin utilization protein low > 64
Azospirillum brasilense Sp245 0.47 AZOBR_RS16165 ribonuclease R 0.52 AZOBR_RS20785 acetoin utilization protein low > 97
Azospirillum sp. SherDot2 0.44 MPMX19_01812 Ribonuclease R 0.50 MPMX19_05063 Histone deacetylase-like amidohydrolase low > 112
Rhodopseudomonas palustris CGA009 0.40 TX73_016160 ribonuclease R 0.49 TX73_004915 histone deacetylase family protein low > 86
Phaeobacter inhibens DSM 17395 0.39 PGA1_c36430 putative ribonuclease R 0.42 PGA1_c34140 histone deacetylase low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS08325 ribonuclease R 0.37 A4249_RS09710 histone deacetylase family protein low > 48
Caulobacter crescentus NA1000 0.38 CCNA_02537 ribonuclease R 0.34 CCNA_02153 acetylspermidine deacetylase low > 66
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_02537 ribonuclease R 0.34 CCNA_02153 acetylspermidine deacetylase low > 67
Rhizobium sp. OAE497 0.38 ABIE40_RS07350 ribonuclease R 0.48 ABIE40_RS03940 histone deacetylase family protein low > 107
Sinorhizobium meliloti 1021 0.38 SMc01365 exoribonuclease II protein 0.44 SMc00969 hypothetical protein low > 103
Agrobacterium fabrum C58 0.37 Atu1303 exoribonuclease 0.47 Atu0748 deacetylase low > 89
Dinoroseobacter shibae DFL-12 0.34 Dshi_0015 ribonuclease R (RefSeq) 0.44 Dshi_3297 histone deacetylase superfamily (RefSeq) low > 64
Bosea sp. OAE506 0.33 ABIE41_RS18140 ribonuclease R 0.54 ABIE41_RS10180 histone deacetylase family protein low > 77
Dechlorosoma suillum PS 0.25 Dsui_3128 ribonuclease R 0.40 Dsui_1976 deacetylase, histone deacetylase/acetoin utilization protein low > 51
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R 0.39 Xcc-8004.4265.1 acetoin utilization family protein 0.40 58
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS08270 ribonuclease R 0.43 ABZR86_RS11245 histone deacetylase family protein low > 74
Lysobacter sp. OAE881 0.24 ABIE51_RS07475 ribonuclease R 0.40 ABIE51_RS05410 histone deacetylase family protein low > 62
Ralstonia solanacearum GMI1000 0.24 RS_RS06155 ribonuclease R 0.37 RS_RS04570 deacetylase low > 80
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18030 ribonuclease R 0.37 RPSI07_RS19635 deacetylase low > 81
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_06755 rnr ribonuclease R 0.37 OKGIIK_11605 Acetoin utilization protein low > 52
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS10985 ribonuclease R 0.37 ABZR87_RS09525 histone deacetylase family protein low > 80
Castellaniella sp019104865 MT123 0.24 ABCV34_RS06625 ribonuclease R 0.39 ABCV34_RS07045 histone deacetylase family protein low > 48
Ralstonia solanacearum UW163 0.24 UW163_RS12810 ribonuclease R 0.38 UW163_RS15975 deacetylase — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS15345 ribonuclease R 0.38 RALBFv3_RS13835 deacetylase low > 76
Pseudomonas simiae WCS417 0.24 PS417_02555 exoribonuclease R 0.23 PS417_13965 acetoin utilization protein low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS02625 ribonuclease R 0.23 PFLU_RS14650 class II histone deacetylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS02625 ribonuclease R 0.23 PFLU_RS14650 class II histone deacetylase low > 109
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS13065 ribonuclease R 0.31 RR42_RS04545 deacetylase low > 128
Paraburkholderia graminis OAS925 0.23 ABIE53_001940 ribonuclease R 0.38 ABIE53_003142 acetoin utilization deacetylase AcuC-like enzyme low > 113
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_00712 RNAse R 0.37 H281DRAFT_03909 Acetoin utilization deacetylase AcuC 0.53 11
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS08455 ribonuclease R 0.36 BPHYT_RS14835 deacetylase low > 109
Serratia liquefaciens MT49 0.22 IAI46_01660 ribonuclease R 0.29 IAI46_02680 class II histone deacetylase low > 86
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22925 ribonuclease R 0.44 QEN71_RS37020 histone deacetylase family protein low > 153
Acidovorax sp. GW101-3H11 0.22 Ac3H11_412 3'-to-5' exoribonuclease RNase R 0.29 Ac3H11_3193 Deacetylases, including yeast histone deacetylase and acetoin utilization protein low > 79
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS09290 ribonuclease R 0.35 HSERO_RS04950 deacetylase low > 78

Not shown: 44 genomes with orthologs for Rru_A3203 only; 8 genomes with orthologs for Rru_A2616 only