Conservation of cofitness between Rru_A1409 and Rru_A1768 in Rhodospirillum rubrum S1H

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1409 L-lactate permease (NCBI) 1.0 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) 0.66 1
Magnetospirillum magneticum AMB-1 0.80 AMB_RS20875 L-lactate permease 0.59 AMB_RS12670 protein-L-isoaspartate O-methyltransferase low > 64
Azospirillum brasilense Sp245 0.74 AZOBR_RS25125 L-lactate permease 0.59 AZOBR_RS15455 protein-L-isoaspartate O-methyltransferase low > 97
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF411 L-lactate permease 0.41 GFF4791 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 78
Pantoea sp. MT58 0.68 IAI47_15030 L-lactate permease 0.44 IAI47_04225 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Shewanella oneidensis MR-1 0.67 SO0827 lldP propionate/L-lactate/D-lactate transporter (from data) 0.40 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.67 BWI76_RS27185 L-lactate/D-lactate permease (from data) 0.42 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase low > 92
Enterobacter sp. TBS_079 0.67 MPMX20_00131 L-lactate permease 0.41 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase low > 85
Escherichia coli BW25113 0.67 b3603 lldP (R)-lactate / (S)-lactate / glycolate:H+ symporter LldP (from data) 0.41 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00096 L-lactate permease 0.41 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase low > 73
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3853 L-lactate transport 0.41 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Pseudomonas simiae WCS417 0.67 PS417_24105 D-lactate transporter (lctP family) (from data) 0.38 PS417_06355 protein-L-isoaspartate O-methyltransferase low > 88
Escherichia coli BL21 0.67 ECD_03461 L-lactate permease 0.41 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II low > 61
Escherichia coli ECRC98 0.67 JDDGAC_19405 lldP L-lactate permease 0.41 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli ECOR27 0.67 NOLOHH_07660 lldP L-lactate permease 0.41 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli ECRC102 0.67 NIAGMN_13540 lldP L-lactate permease 0.41 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase
Escherichia coli ECRC100 0.67 OKFHMN_15780 lldP L-lactate permease 0.41 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase low > 80
Escherichia coli ECRC62 0.67 BNILDI_03855 lldP L-lactate permease 0.41 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli Nissle 1917 0.67 ECOLIN_RS20570 L-lactate permease 0.41 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase low > 55
Escherichia coli ECOR38 0.67 HEPCGN_14620 lldP L-lactate permease 0.41 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli ECRC101 0.67 MCAODC_06290 lldP L-lactate permease 0.41 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia fergusonii Becca 0.67 EFB2_00207 L-lactate permease 0.41 EFB2_01167 Protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli ECRC99 0.67 KEDOAH_12370 lldP L-lactate permease 0.41 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS25945 L-lactate permease 0.38 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS25945 L-lactate permease 0.38 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 109
Pseudomonas putida KT2440 0.66 PP_4735 L-lactate permease 0.39 PP_1621 Protein-L-isoaspartate O-methyltransferase low > 96
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_05700 L-lactate permease 0.37 AO353_16605 protein-L-isoaspartate O-methyltransferase low > 101
Pseudomonas sp. RS175 0.66 PFR28_00063 Glycolate permease GlcA 0.39 PFR28_00425 Protein-L-isoaspartate O-methyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_5114 L-lactate permease 0.39 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 87
Pseudomonas sp. S08-1 0.65 OH686_17015 L-lactate permease 0.38 OH686_18175 protein-L-isoaspartate O-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_07550 L-lactate and D-lactate permease (lctP family) (from data) 0.38 AO356_05895 protein-L-isoaspartate O-methyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_1186 L-lactate permease 0.39 Pf1N1B4_3113 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 87
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3380 L-lactate permease 0.38 Pf6N2E2_3039 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 103
Desulfovibrio vulgaris Miyazaki F 0.48 DvMF_2129 L-lactate transport (RefSeq) 0.34 DvMF_0412 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU3284 b2975 L-lactate permease (TIGR) 0.34 DVU1849 pcm protein-L-isoaspartate O-methyltransferase (TIGR) low > 55
Azospirillum sp. SherDot2 0.44 MPMX19_06091 Glycolate permease GlcA 0.55 MPMX19_01168 Protein-L-isoaspartate O-methyltransferase low > 112
Rhodopseudomonas palustris CGA009 0.39 TX73_005835 L-lactate permease 0.37 TX73_014695 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS13235 lactate permease 0.35 BPHYT_RS11680 protein-L-isoaspartate O-methyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_00392 lactate permease 0.32 H281DRAFT_00842 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 103
Dickeya dianthicola 67-19 0.21 HGI48_RS12340 L-lactate permease 0.43 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase
Dickeya dianthicola ME23 0.21 DZA65_RS12780 L-lactate permease 0.43 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Dickeya dadantii 3937 0.20 DDA3937_RS12250 L-lactate permease 0.43 DDA3937_RS16885 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Pseudomonas stutzeri RCH2 0.16 Psest_0955 D,L-lactate:H+ symporter (from data) 0.39 Psest_2809 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 67
Shewanella amazonensis SB2B 0.16 Sama_2439 L-lactate permease, putative (RefSeq) 0.39 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.15 CSW01_19030 L-lactate permease 0.43 CSW01_02825 protein-L-isoaspartate O-methyltransferase low > 62
Shewanella loihica PV-4 0.15 Shew_3135 L-lactate permease (RefSeq) 0.40 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.15 MIT1002_02673 L-lactate permease 0.38 MIT1002_00628 Protein-L-isoaspartate O-methyltransferase low > 70
Shewanella sp. ANA-3 0.15 Shewana3_2904 propionate/L-lactate/D-lactate transporter (from data) 0.41 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 73
Serratia liquefaciens MT49 0.12 IAI46_20615 L-lactate permease 0.43 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86

Not shown: 14 genomes with orthologs for Rru_A1409 only; 30 genomes with orthologs for Rru_A1768 only