Homologs of SMc03246 from Sinorhizobium meliloti 1021

integrase DNA protein
SEED: Phage integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc03246 integrase DNA protein insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS00670 site-specific integrase insig. 51 96
o Agrobacterium fabrum C58 Atu3831 phage-related integrase insig. 48 96
o Paraburkholderia graminis OAS925 ABIE53_001680 integrase insig. 45 97
o Bosea sp. OAE506 ABIE41_RS07475 site-specific integrase insig. 44 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16785 integrase arm-type DNA-binding domain-containing protein insig. 42 99
o Rhodanobacter denitrificans MT42 LRK55_RS16510 integrase arm-type DNA-binding domain-containing protein cofit 42 98
o Ralstonia solanacearum GMI1000 RS_RS09580 DUF4102 domain-containing protein insig. 43 96
o Caulobacter crescentus NA1000 CCNA_00480 bacteriophage P4 integrase cofit 42 96
o Caulobacter crescentus NA1000 Δfur CCNA_00480 bacteriophage P4 integrase cofit 42 96
o Escherichia fergusonii Becca EFB2_01976 Prophage integrase IntA insig. 42 96
o Escherichia coli Nissle 1917 ECOLIN_RS11220 site-specific integrase insig. 42 96
o Acidovorax sp. GW101-3H11 Ac3H11_3683 Integrase insig. 40 98
o Ralstonia solanacearum UW163 UW163_RS10310 integrase insig. 42 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6012 Integrase insig. 39 98
  Acidovorax sp. GW101-3H11 Ac3H11_54 Integrase insig. 40 93
o Acinetobacter radioresistens SK82 MPMX26_00918 Prophage integrase IntA insig. 38 95
o Burkholderia phytofirmans PsJN BPHYT_RS32410 integrase insig. 39 95
o Pseudomonas simiae WCS417 PS417_24855 integrase insig. 36 97
o Escherichia coli ECRC100 OKFHMN_04390 fimB integrase no data 37 96
o Escherichia coli ECRC101 MCAODC_23750 fimB integrase insig. 37 96
o Escherichia coli ECRC102 NIAGMN_03820 fimB integrase insig. 37 96
o Escherichia coli ECRC98 JDDGAC_08000 fimB integrase cofit 37 96
o Escherichia coli ECRC99 KEDOAH_23355 fimB integrase no data 37 96
  Escherichia coli ECRC100 OKFHMN_05780 fimB integrase no data 37 96
  Escherichia coli Nissle 1917 ECOLIN_RS05355 tyrosine-type recombinase/integrase insig. 37 96
  Escherichia fergusonii Becca EFB2_03054 Prophage integrase IntA insig. 37 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS03565 site-specific integrase insig. 38 96
o Erwinia tracheiphila SCR3 LU632_RS13705 tyrosine-type recombinase/integrase insig. 35 96
o Klebsiella michiganensis M5al BWI76_RS10240 hypothetical protein no data 35 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1865 Domain of unknown function (DUF4102)/Phage integrase family insig. 36 76
  Sinorhizobium meliloti 1021 SMc02187 integrase DNA protein insig. 31 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2923 Phage integrase family insig. 47 45
o Shewanella sp. ANA-3 Shewana3_2953 phage integrase family protein (RefSeq) cofit 30 96
o Rahnella sp. WP5 EX31_RS20945 tyrosine-type recombinase/integrase insig. 31 96
o Dickeya dadantii 3937 DDA3937_RS16520 tyrosine-type recombinase/integrase insig. 31 96
  Paraburkholderia graminis OAS925 ABIE53_002701 integrase sig. 41 44
o Shewanella oneidensis MR-1 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 29 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU1527 site-specific recombinase, phage integrase family (TIGR) insig. 32 95
  Erwinia tracheiphila SCR3 LU632_RS17630 integrase domain-containing protein insig. 30 96
  Escherichia coli Nissle 1917 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein insig. 30 95
o Escherichia coli ECOR38 HEPCGN_14290 fimB integrase insig. 30 95
o Escherichia coli BL21 ECD_03516 Int cofit 30 95
  Dickeya dadantii 3937 DDA3937_RS09105 tyrosine-type recombinase/integrase insig. 30 96
  Klebsiella michiganensis M5al BWI76_RS05825 putative site specific integrase insig. 28 97
  Escherichia fergusonii Becca EFB2_00121 Prophage integrase IntS insig. 29 95
  Ralstonia solanacearum GMI1000 RS_RS04790 DUF4102 domain-containing protein insig. 31 96
o Dickeya dianthicola 67-19 HGI48_RS14775 tyrosine-type recombinase/integrase insig. 30 95
o Variovorax sp. OAS795 ABID97_RS11165 integrase arm-type DNA-binding domain-containing protein insig. 31 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_02735 integrase insig. 27 97
  Escherichia coli ECRC100 OKFHMN_15505 fimB integrase cofit 30 95
  Escherichia coli ECRC101 MCAODC_06015 fimB integrase insig. 30 95
  Escherichia coli ECRC102 NIAGMN_13265 fimB integrase insig. 30 95
  Escherichia coli ECRC98 JDDGAC_19130 fimB integrase cofit 30 95
  Escherichia coli ECRC99 KEDOAH_12640 fimB integrase no data 30 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 30 96
  Escherichia coli ECOR38 HEPCGN_09925 intB Putative protein IntB insig. 29 96
o Dickeya dianthicola ME23 DZA65_RS04000 tyrosine-type recombinase/integrase insig. 29 95
  Escherichia coli ECRC100 OKFHMN_09385 fimB integrase insig. 28 97
  Escherichia coli ECRC102 NIAGMN_07435 fimB integrase insig. 28 97
  Escherichia coli ECRC98 JDDGAC_13020 fimB integrase cofit 28 97
o Escherichia coli ECRC62 BNILDI_09605 integrase cofit 31 98
o Pseudomonas stutzeri RCH2 Psest_1102 Integrase insig. 27 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_08825 integrase insig. 32 96
  Escherichia coli BW25113 b2442 intZ CPZ-55 prophage; predicted integrase (RefSeq) insig. 31 89
  Escherichia coli ECRC98 JDDGAC_15400 int Integrase insig. 31 96
o Pectobacterium carotovorum WPP14 HER17_RS17450 integrase domain-containing protein insig. 30 90
o Serratia liquefaciens MT49 IAI46_05415 tyrosine-type recombinase/integrase insig. 29 94
  Escherichia fergusonii Becca EFB2_04264 Prophage integrase IntA insig. 29 96
  Serratia liquefaciens MT49 IAI46_19665 tyrosine-type recombinase/integrase insig. 28 96
  Pseudomonas stutzeri RCH2 Psest_4016 Integrase insig. 29 96
  Shewanella sp. ANA-3 Shewana3_1791 phage integrase family protein (RefSeq) insig. 29 97
o Enterobacter asburiae PDN3 EX28DRAFT_2648 Integrase insig. 27 97
  Shewanella loihica PV-4 Shew_1267 phage integrase family protein (RefSeq) insig. 28 95
  Acinetobacter radioresistens SK82 MPMX26_02861 Prophage integrase IntS insig. 27 95
  Pseudomonas simiae WCS417 PS417_10250 integrase insig. 29 97
o Pantoea sp. MT58 IAI47_04780 tyrosine-type recombinase/integrase insig. 28 90
  Erwinia tracheiphila SCR3 LU632_RS20815 tyrosine-type recombinase/integrase insig. 27 95
  Dickeya dianthicola 67-19 HGI48_RS04290 tyrosine-type recombinase/integrase insig. 29 96
  Rahnella sp. WP5 EX31_RS04360 integrase arm-type DNA-binding domain-containing protein insig. 28 96
  Klebsiella michiganensis M5al BWI76_RS03150 site-specific recombinase, phage integrase family protein insig. 29 96
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 28 97
  Pantoea sp. MT58 IAI47_07545 integrase arm-type DNA-binding domain-containing protein insig. 27 98
  Escherichia coli BL21 ECD_04136 putative integrase insig. 28 91
  Dickeya dadantii 3937 DDA3937_RS02690 integrase arm-type DNA-binding domain-containing protein insig. 27 96
  Escherichia coli ECRC62 BNILDI_12605 Prophage integrase IntZ cofit 31 84
o Enterobacter sp. TBS_079 MPMX20_03492 Prophage integrase IntA insig. 29 95
  Dickeya dadantii 3937 DDA3937_RS02015 integrase arm-type DNA-binding domain-containing protein insig. 29 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3387 Phage integrase insig. 27 97
  Ralstonia solanacearum UW163 UW163_RS08775 integrase insig. 30 94
  Dickeya dadantii 3937 DDA3937_RS03855 integrase insig. 28 95
  Pectobacterium carotovorum WPP14 HER17_RS13585 integrase arm-type DNA-binding domain-containing protein insig. 29 95
  Acinetobacter radioresistens SK82 MPMX26_02101 Prophage integrase IntA insig. 28 93
  Pectobacterium carotovorum WPP14 HER17_RS07975 integrase arm-type DNA-binding domain-containing protein cofit 28 96
o Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 30 95
  Variovorax sp. OAS795 ABID97_RS14550 integrase arm-type DNA-binding domain-containing protein insig. 42 38
  Escherichia coli ECOR27 NOLOHH_12785 integrase insig. 29 97
  Escherichia coli BW25113 b2622 intA CP4-57 prophage; integrase (NCBI) insig. 28 95
  Dickeya dianthicola 67-19 HGI48_RS04880 integrase arm-type DNA-binding domain-containing protein insig. 27 96
  Dickeya dianthicola 67-19 HGI48_RS01975 integrase arm-type DNA-binding domain-containing protein insig. 28 96