Homologs of Psyr_4770 from Pseudomonas syringae pv. syringae B728a

diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) strong 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 100 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1479 Sensory box/GGDEF family protein insig. 83 100
o Pseudomonas fluorescens FW300-N2E3 AO353_12850 diguanylate cyclase strong 82 100
o Pseudomonas sp. RS175 PFR28_05058 hypothetical protein strong 82 100
o Pseudomonas simiae WCS417 PS417_02210 diguanylate cyclase strong 82 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_217 Sensory box/GGDEF family protein insig. 81 100
o Pseudomonas fluorescens FW300-N2C3 AO356_08975 diguanylate cyclase strong 82 100
o Pseudomonas fluorescens SBW25 PFLU_RS02265 EAL domain-containing protein insig. 81 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02265 EAL domain-containing protein strong 81 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3677 Sensory box/GGDEF family protein strong 82 100
o Pseudomonas putida KT2440 PP_0337 Sensory box protein sig. 78 100
o Pseudomonas sp. S08-1 OH686_09725 Sensory box/GGDEF family protein cofit 70 100
o Pseudomonas stutzeri RCH2 Psest_0445 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 67 99
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 64
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 38 67
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 41 61
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 42 61
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 64
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 40 62
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 60
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 39 68
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 41 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 41 61
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 61
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 41 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 39 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 39 68
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 39 68
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 39 68
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 61
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 39 69
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 41 64
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 39 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 39 62
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 61
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 40 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_725 Sensory box/GGDEF family protein insig. 40 60
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 62
  Pseudomonas sp. RS175 PFR28_04522 hypothetical protein insig. 40 60
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 37 61
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 60
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 39 60
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 36 66
  Magnetospirillum magneticum AMB-1 AMB_RS09950 GGDEF domain-containing protein cofit 38 70
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 61
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 39 62
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 39 62
  Pseudomonas fluorescens FW300-N2C3 AO356_11995 diguanylate cyclase insig. 40 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2007 Sensory box/GGDEF family protein insig. 39 60
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 39 60
  Pseudomonas fluorescens FW300-N2E3 AO353_10050 diguanylate cyclase insig. 39 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4274 Sensory box/GGDEF family protein insig. 39 60
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 38 62
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 62
  Rhodospirillum rubrum S1H Rru_A0612 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 41 62
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 61
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 36 68
  Pseudomonas sp. S08-1 OH686_13050 Sensory box/GGDEF family protein cofit 39 60
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 38 61
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 40 59
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 39 62
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 38 61
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 39 59
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 40 59
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 35 72
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 36 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4009 GGDEF domain protein strong 39 59
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 36 64
  Ralstonia solanacearum GMI1000 RS_RS18380 sensor domain-containing diguanylate cyclase strong 36 64
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 39 59
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 39 59
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22225 sensor domain-containing diguanylate cyclase cofit 36 64
  Ralstonia solanacearum UW163 UW163_RS22770 sensor domain-containing diguanylate cyclase insig. 36 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 38 61
  Magnetospirillum magneticum AMB-1 AMB_RS06515 PAS domain S-box protein insig. 38 61
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 40 62
  Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 39 59
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 39 62
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 39 60
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 36 68
  Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 59
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 59
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 63
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 38 61
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 37 67
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 38 61
  Ralstonia solanacearum PSI07 RPSI07_RS00975 sensor domain-containing diguanylate cyclase cofit 36 64
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 39 62
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 38 61
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 61
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 38 59
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 37 61
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 39 60