Homologs of ybeF from Escherichia coli ECOR38

ybeF: YbeF family transcriptional regulator
SEED: LysR-family transcriptional regulator YbeF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli ECOR38 HEPCGN_00880 ybeF YbeF family transcriptional regulator insig. 100 100
o Escherichia coli ECRC100 OKFHMN_07395 ybeF YbeF family transcriptional regulator cofit 99 100
o Escherichia coli ECRC101 MCAODC_26610 ybeF YbeF family transcriptional regulator insig. 99 100
o Escherichia coli ECRC102 NIAGMN_05450 ybeF YbeF family transcriptional regulator insig. 99 100
o Escherichia coli ECRC98 JDDGAC_11040 ybeF YbeF family transcriptional regulator insig. 99 100
o Escherichia coli ECRC99 KEDOAH_20575 ybeF YbeF family transcriptional regulator no data 99 100
o Escherichia coli ECOR27 NOLOHH_23770 ybeF YbeF family transcriptional regulator insig. 98 100
o Escherichia coli ECRC62 BNILDI_21780 ybeF YbeF family transcriptional regulator cofit 98 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03077 putative HTH-type transcriptional regulator YbdO insig. 98 100
o Escherichia coli BW25113 b0629 ybeF putative transcriptional regulator LYSR-type (VIMSS) insig. 98 100
o Escherichia coli BL21 ECD_00598 LysR family putative transcriptional regulator insig. 98 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4542 LysR-family transcriptional regulator YbeF insig. 69 100
o Enterobacter sp. TBS_079 MPMX20_01288 putative HTH-type transcriptional regulator YbdO strong 65 100
o Enterobacter asburiae PDN3 EX28DRAFT_2334 Transcriptional regulator cofit 63 100
o Klebsiella pneumoniae MKP103 KDGMDA_16365 YbeF family transcriptional regulator insig. 55 93
o Klebsiella michiganensis M5al BWI76_RS08005 transcriptional regulator insig. 52 100
  Escherichia fergusonii Becca EFB2_03463 hypothetical protein insig. 85 40
  Escherichia coli ECRC62 BNILDI_21905 ybdO Uncharacterized HTH-type transcriptional regulator YbdO insig. 30 92
  Escherichia coli ECOR27 NOLOHH_23895 ybdO Uncharacterized HTH-type transcriptional regulator YbdO no data 30 92
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03102 putative HTH-type transcriptional regulator YbdO insig. 30 92
  Escherichia coli BW25113 b0603 ybdO predicted DNA-binding transcriptional regulator (NCBI) cofit 30 92
  Escherichia coli ECOR38 HEPCGN_00760 LysR family transcriptional regulator insig. 30 92
  Escherichia fergusonii Becca EFB2_03488 putative HTH-type transcriptional regulator YbdO insig. 30 92
  Escherichia coli Nissle 1917 ECOLIN_RS03310 LysR family transcriptional regulator insig. 30 92
  Escherichia coli ECRC100 OKFHMN_07520 ybdO Uncharacterized HTH-type transcriptional regulator YbdO cofit 30 92
  Escherichia coli ECRC101 MCAODC_26735 ybdO Uncharacterized HTH-type transcriptional regulator YbdO insig. 30 92
  Escherichia coli ECRC102 NIAGMN_05575 ybdO Uncharacterized HTH-type transcriptional regulator YbdO insig. 30 92
  Escherichia coli ECRC98 JDDGAC_11165 ybdO Uncharacterized HTH-type transcriptional regulator YbdO insig. 30 92
  Escherichia coli ECRC99 KEDOAH_20450 ybdO Uncharacterized HTH-type transcriptional regulator YbdO no data 30 92
  Enterobacter asburiae PDN3 EX28DRAFT_2351 Transcriptional regulator insig. 30 91
  Rahnella sp. WP5 EX31_RS04400 LysR family transcriptional regulator insig. 29 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4511 LysR-family transcriptional regulator YbeF no data 29 88
  Klebsiella pneumoniae MKP103 KDGMDA_16290 LysR family transcriptional regulator insig. 30 91
  Enterobacter sp. TBS_079 MPMX20_01270 putative HTH-type transcriptional regulator YbdO cofit 27 87
  Klebsiella michiganensis M5al BWI76_RS07935 LysR family transcriptional regulator sig. 27 90
o Marinobacter adhaerens HP15 HP15_820 transcriptional regulator, LysR family protein insig. 27 89
  Ralstonia sp. UNC404CL21Col ABZR87_RS14695 LysR family transcriptional regulator insig. 26 87
  Vibrio cholerae E7946 ATCC 55056 CSW01_04050 LysR family transcriptional regulator insig. 25 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS33715 LysR family transcriptional regulator insig. 28 79
  Rahnella sp. WP5 EX31_RS09080 LysR family transcriptional regulator insig. 24 92
  Cupriavidus basilensis FW507-4G11 RR42_RS05720 LysR family transcriptional regulator insig. 27 81
  Burkholderia phytofirmans PsJN BPHYT_RS10685 LysR family transcriptional regulator insig. 27 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS07540 LysR family transcriptional regulator insig. 27 79
  Escherichia coli ECOR27 NOLOHH_03050 leuO transcriptional regulator LeuO insig. 26 88
  Rahnella sp. WP5 EX31_RS03675 transcriptional regulator LeuO insig. 26 88
  Azospirillum sp. SherDot2 MPMX19_04493 PCP degradation transcriptional activation protein insig. 32 61
  Escherichia coli ECRC62 BNILDI_08560 leuO transcriptional regulator LeuO cofit 26 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03582 HTH-type transcriptional regulator LeuO insig. 26 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1873 Transcriptional regulator insig. 25 92
  Pseudomonas aeruginosa PA14 IKLFDK_12545 LysR family transcriptional regulator insig. 24 88
  Pseudomonas aeruginosa PA14 IKLFDK_27530 LysR family transcriptional regulator insig. 27 81
  Pseudomonas simiae WCS417 PS417_16995 LysR family transcriptional regulator insig. 24 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF162 Probable transcriptional activator for leuABCD operon insig. 28 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03707 PCP degradation transcriptional activation protein cofit 23 88
  Shewanella loihica PV-4 Shew_3589 LysR family transcriptional regulator (RefSeq) insig. 28 81
  Pseudomonas fluorescens SBW25 PFLU_RS18945 LysR family transcriptional regulator insig. 24 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18945 LysR family transcriptional regulator insig. 24 81
  Escherichia coli ECRC100 OKFHMN_10705 leuO transcriptional regulator LeuO cofit 27 88
  Escherichia coli ECRC101 MCAODC_01220 leuO transcriptional regulator LeuO insig. 27 88
  Escherichia coli ECRC102 NIAGMN_08555 leuO transcriptional regulator LeuO insig. 27 88
  Escherichia coli ECRC98 JDDGAC_14300 leuO transcriptional regulator LeuO insig. 27 88
  Escherichia coli ECRC99 KEDOAH_17450 leuO transcriptional regulator LeuO no data 27 88
  Klebsiella michiganensis M5al BWI76_RS10460 transcriptional regulator LeuO insig. 26 87
  Escherichia coli ECOR38 HEPCGN_08685 leuO transcriptional regulator LeuO insig. 26 88
  Pseudomonas sp. BP01 JOY50_RS04680 LysR family transcriptional regulator insig. 24 88
  Pseudomonas putida KT2440 PP_2436 Transcriptional regulator, LysR family strong 25 80
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07820 LysR family transcriptional regulator cofit 27 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01652 DNA-binding transcriptional regulator, LysR family insig. 26 82
  Escherichia coli BL21 ECD_00078 global transcription factor sig. 26 84
  Escherichia coli BW25113 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) sig. 26 84
  Acinetobacter baumannii LAC-4 RR41_RS13485 LysR family transcriptional regulator sig. 31 79
  Pseudomonas sp. DMC3 GFF2774 PCP degradation transcriptional activation protein insig. 28 77
  Enterobacter asburiae PDN3 EX28DRAFT_1337 Transcriptional regulator insig. 29 76
  Cupriavidus basilensis FW507-4G11 RR42_RS30005 LysR family transcriptional regulator insig. 28 81
  Pseudomonas stutzeri RCH2 Psest_3970 Transcriptional regulator sig. 26 81
  Alteromonas macleodii MIT1002 MIT1002_02750 HTH-type transcriptional regulator LeuO insig. 25 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3992 Transcriptional regulator, LysR family insig. 25 81
  Escherichia fergusonii Becca EFB2_03970 HTH-type transcriptional regulator LeuO insig. 26 84
  Escherichia coli Nissle 1917 ECOLIN_RS00410 transcriptional regulator LeuO insig. 26 84
  Serratia liquefaciens MT49 IAI46_16085 LysR family transcriptional regulator insig. 27 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4425 Transcriptional regulator, LysR family insig. 24 88
  Ralstonia solanacearum GMI1000 RS_RS18215 LysR family transcriptional regulator insig. 24 88
  Klebsiella pneumoniae MKP103 KDGMDA_12920 transcriptional regulator LeuO sig. 27 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21045 LysR family transcriptional regulator insig. 25 82
  Ralstonia solanacearum UW163 UW163_RS22185 LysR family transcriptional regulator insig. 25 82
  Marinobacter adhaerens HP15 HP15_1640 transcriptional regulator, LysR family protein insig. 25 91
  Ralstonia solanacearum PSI07 RPSI07_RS14540 LysR family transcriptional regulator insig. 30 54
  Xanthobacter sp. DMC5 GFF2011 PCP degradation transcriptional activation protein insig. 28 76
  Variovorax sp. OAS795 ABID97_RS29145 LysR family transcriptional regulator insig. 27 80
  Ralstonia solanacearum GMI1000 RS_RS10140 LysR family transcriptional regulator insig. 30 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02770 LysR family transcriptional regulator insig. 29 54
  Ralstonia solanacearum UW163 UW163_RS10955 LysR family transcriptional regulator insig. 29 54
  Pantoea sp. MT58 IAI47_19555 LysR family transcriptional regulator insig. 27 80
  Herbaspirillum seropedicae SmR1 HSERO_RS06735 LysR family transcriptional regulator insig. 26 79
  Pseudomonas sp. S08-1 OH686_00880 Transcriptional regulator, LysR family insig. 22 88
  Rahnella sp. WP5 EX31_RS17180 LysR family transcriptional regulator no data 29 76
  Herbaspirillum seropedicae SmR1 HSERO_RS24025 LysR family transcriptional regulator no data 26 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2596 Transcriptional regulator, LysR family insig. 26 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5483 LysR-family transcriptional regulator insig. 25 81
  Pseudomonas fluorescens FW300-N2E3 AO353_20375 LysR family transcriptional regulator insig. 24 88