Homologs of PS417_23815 from Pseudomonas simiae WCS417

pseudouridine synthase
SEED: Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)

61 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pseudomonas simiae WCS417	PS417_23815		pseudouridine synthase	insig.	100	100
o	Pseudomonas orientalis W4I3	QF045_RS26075		YqcC family protein	insig.	96	100
o	Pseudomonas fluorescens SBW25	PFLU_RS25655		YqcC family protein	insig.	96	100
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS25655		YqcC family protein	insig.	96	100
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_04914		putative protein YqcC	insig.	93	100
o	Pseudomonas fluorescens FW300-N2C3	AO356_16160		pseudouridine synthase	insig.	75	98
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_5173		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	insig.	74	99
o	Pseudomonas sp. RS175	PFR28_03701		hypothetical protein	insig.	75	99
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2876		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	no data	76	100
o	Pseudomonas sp. DMC3	GFF4048		hypothetical protein	no data	73	100
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1537		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	sig.	73	100
o	Pseudomonas syringae pv. syringae B728a	Psyr_0844		Protein of unknown function DUF446	insig.	72	100
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0844		Protein of unknown function DUF446	sig.	72	100
o	Pseudomonas sp. SVBP6	COO64_RS15010		YqcC family protein	insig.	65	96
o	Pseudomonas fluorescens FW300-N2E3	AO353_14485		pseudouridine synthase	sig.	72	100
o	Pseudomonas putida KT2440	PP_4681		conserved protein of unknown function	strong	65	96
o	Pseudomonas aeruginosa PA14	IKLFDK_30135		pseudouridine synthase	sig.	65	96
o	Pseudomonas sp. BP01	JOY50_RS27755		YqcC family protein	insig.	65	96
o	Pseudomonas aeruginosa MRSN321	DY961_RS09225		YqcC family protein	sig.	64	96
o	Pseudomonas aeruginosa PUPa3	DQ20_RS52805		YqcC family protein	insig.	64	96
o	Pseudomonas stutzeri RCH2	Psest_1034		Uncharacterized protein conserved in bacteria	no data	65	96
o	Pseudomonas sp. S08-1	OH686_08140		Uncharacterized protein YqcC	insig.	61	100
o	Pseudomonas segetis P6	ACVTMO_RS06310		YqcC family protein	insig.	54	100
o	Marinobacter adhaerens HP15	HP15_1304		protein containing DUF446	no data	48	90
o	Erwinia amylovora T8	OLJFJH_09215		tRNA pseudouridine synthase C	insig.	39	90
o	Pectobacterium carotovorum WPP14	HER17_RS16370		YqcC family protein	insig.	36	91
o	Shewanella oneidensis MR-1	SO1619		conserved hypothetical protein (NCBI ptt file)	sig.	38	87
o	Shewanella sp. ANA-3	Shewana3_2825		dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq)	cofit	36	87
o	Serratia liquefaciens MT49	IAI46_20305		YqcC family protein	insig.	35	90
o	Dickeya dadantii 3937	DDA3937_RS05080		YqcC family protein	insig.	36	90
	Shewanella loihica PV-4	Shew_2644		hypothetical protein (RefSeq)	insig.	41	72
o	Dickeya dianthicola 67-19	HGI48_RS05080		YqcC family protein	insig.	37	90
	Klebsiella michiganensis M5al	BWI76_RS22855		hypothetical protein	insig.	39	70
o	Dickeya dianthicola ME23	DZA65_RS05420		YqcC family protein	insig.	37	90
o	Enterobacter asburiae PDN3	EX28DRAFT_2873		Uncharacterized protein conserved in bacteria	insig.	37	92
	Kangiella aquimarina DSM 16071	B158DRAFT_1935		Uncharacterized protein conserved in bacteria	insig.	39	73
o	Escherichia coli BL21	ECD_02637		DUF446 family protein	cofit	37	89
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00939		putative protein YqcC	insig.	37	89
	Shewanella amazonensis SB2B	Sama_1130		hypothetical protein (RefSeq)	insig.	42	67
o	Escherichia coli ECOR38	HEPCGN_19460		tRNA pseudouridine synthase C	insig.	37	81
	Rahnella sp. WP5	EX31_RS13070		YqcC family protein	insig.	45	57
o	Enterobacter sp. TBS_079	MPMX20_03662		putative protein YqcC	insig.	35	92
o	Escherichia coli ECRC100	OKFHMN_20205		tRNA pseudouridine synthase C	insig.	36	81
o	Escherichia coli ECRC101	MCAODC_10730		tRNA pseudouridine synthase C	insig.	36	81
o	Escherichia coli ECRC102	NIAGMN_17975		tRNA pseudouridine synthase C	cofit	36	81
o	Escherichia coli ECRC98	JDDGAC_23870		tRNA pseudouridine synthase C	insig.	36	81
o	Escherichia coli ECRC99	KEDOAH_07925		tRNA pseudouridine synthase C	no data	36	81
o	Escherichia coli ECOR27	NOLOHH_12085	yqcC	Uncharacterized protein YqcC	insig.	36	81
o	Escherichia coli ECRC62	BNILDI_10590	yqcC	Uncharacterized protein YqcC	insig.	36	81
o	Escherichia coli BW25113	b2792	yqcC	hypothetical protein (NCBI)	insig.	36	81
	Klebsiella pneumoniae MKP103	KDGMDA_03380		tRNA pseudouridine synthase C	no data	36	71
	Klebsiella pneumoniae MRSN742743	KFA93_RS18380		YqcC family protein	no data	36	71
o	Escherichia coli Nissle 1917	ECOLIN_RS15555		YqcC family protein	insig.	36	81
o	Escherichia fergusonii Becca	EFB2_01125		putative protein YqcC	insig.	36	81
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4847		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	cofit	35	75
	Vibrio cholerae E7946 ATCC 55056	CSW01_04550		pseudouridine synthase	insig.	51	49
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS16910		YqcC family protein	cofit	33	93
o	Pantoea sp. MT58	IAI47_04060		YqcC family protein	insig.	33	93
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_17315		tRNA pseudouridine synthase C	insig.	33	90
	Erwinia tracheiphila SCR3	LU632_RS06290		YqcC family protein	insig.	33	90
	Alteromonas macleodii MIT1002	MIT1002_00997		hypothetical protein	insig.	36	60