Homologs of GFF4501 from Variovorax sp. SCN45

Transcriptional regulator, LysR family
SEED: Transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4501 Transcriptional regulator, LysR family insig. 100 100
o Variovorax sp. OAS795 ABID97_RS29065 LysR family transcriptional regulator no data 90 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS14560 LysR substrate-binding domain-containing protein insig. 56 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3097.1 Transcriptional regulator insig. 51 95
o Methylophilus sp. DMC18 GFF933 HTH-type transcriptional regulator YhaJ insig. 45 93
o Herbaspirillum seropedicae SmR1 HSERO_RS17845 LysR family transcriptional regulator insig. 45 95
o Ralstonia solanacearum GMI1000 RS_RS11085 LysR family transcriptional regulator insig. 45 95
  Cupriavidus basilensis FW507-4G11 RR42_RS14800 LysR family transcriptional regulator strong 45 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01092 transcriptional regulator, LysR family insig. 43 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS15530 LysR substrate-binding domain-containing protein insig. 43 95
o Dechlorosoma suillum PS Dsui_1258 transcriptional regulator insig. 45 94
o Ralstonia solanacearum PSI07 RPSI07_RS13590 LysR family transcriptional regulator insig. 44 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03640 LysR family transcriptional regulator cofit 44 95
o Ralstonia solanacearum UW163 UW163_RS10030 LysR family transcriptional regulator insig. 44 95
o Serratia liquefaciens MT49 IAI46_18615 LysR family transcriptional regulator insig. 40 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS37445 LysR family transcriptional regulator insig. 43 96
o Paraburkholderia graminis OAS925 ABIE53_002240 DNA-binding transcriptional LysR family regulator sig. 42 96
o Burkholderia phytofirmans PsJN BPHYT_RS07085 LysR family transcriptional regulator insig. 42 98
o Shewanella sp. ANA-3 Shewana3_1223 LysR family transcriptional regulator (RefSeq) insig. 43 94
o Shewanella oneidensis MR-1 SO3318 transcriptional regulator, LysR family (NCBI ptt file) sig. 43 94
  Burkholderia phytofirmans PsJN BPHYT_RS30350 LysR family transcriptional regulator strong 42 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS16275 LysR family transcriptional regulator insig. 41 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS17620 LysR family transcriptional regulator insig. 40 95
  Serratia liquefaciens MT49 IAI46_07350 LysR family transcriptional regulator insig. 41 97
  Cupriavidus basilensis FW507-4G11 RR42_RS03595 LysR family transcriptional regulator insig. 40 95
o Marinobacter adhaerens HP15 HP15_502 transcriptional regulator, LysR family protein insig. 42 95
  Paraburkholderia graminis OAS925 ABIE53_006117 DNA-binding transcriptional LysR family regulator insig. 38 100
o Klebsiella michiganensis M5al BWI76_RS06255 LysR family transcriptional regulator insig. 39 96
o Klebsiella pneumoniae MKP103 KDGMDA_14330 LysR family transcriptional regulator insig. 40 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02483 transcriptional regulator, LysR family insig. 38 96
o Rahnella sp. WP5 EX31_RS05190 LysR family transcriptional regulator insig. 41 95
  Shewanella sp. ANA-3 Shewana3_2061 putative DNA-binding transcriptional regulator (RefSeq) sig. 39 93
o Shewanella amazonensis SB2B Sama_1388 LysR family transcriptional regulator (RefSeq) insig. 38 93
o Shewanella loihica PV-4 Shew_2013 putative DNA-binding transcriptional regulator (RefSeq) cofit 35 93
  Shewanella oneidensis MR-1 SO2374 transcriptional regulator, LysR family (NCBI ptt file) insig. 38 93
  Variovorax sp. OAS795 ABID97_RS18015 LysR family transcriptional regulator insig. 40 93
  Shewanella amazonensis SB2B Sama_1783 putative DNA-binding transcriptional regulator (RefSeq) sig. 37 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3915 Hypothetical transcriptional regulator yeeY insig. 37 95
o Escherichia coli BL21 ECD_01918 LysR family putative transcriptional regulator insig. 36 95
  Variovorax sp. SCN45 GFF590 Transcriptional regulator, LysR family insig. 41 85
o Escherichia coli ECOR38 HEPCGN_03240 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 36 95
o Escherichia coli Nissle 1917 ECOLIN_RS11920 LysR substrate-binding domain-containing protein no data 36 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01685 HTH-type transcriptional regulator YhaJ insig. 36 95
o Escherichia coli ECRC100 OKFHMN_24535 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 36 95
o Escherichia coli ECRC101 MCAODC_20405 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 36 95
o Escherichia coli ECRC102 NIAGMN_22480 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 36 95
o Escherichia coli ECRC98 JDDGAC_28645 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 36 95
o Escherichia coli ECRC99 KEDOAH_03615 yeeY Uncharacterized HTH-type transcriptional regulator YeeY no data 36 95
o Escherichia coli ECOR27 NOLOHH_15860 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 36 95
o Escherichia coli BW25113 b2015 yeeY putative transcriptional regulator LYSR-type (VIMSS) insig. 36 95
o Escherichia fergusonii Becca EFB2_01841 HTH-type transcriptional regulator YhaJ insig. 36 95
o Escherichia coli ECRC62 BNILDI_14760 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 36 95
o Enterobacter asburiae PDN3 EX28DRAFT_0543 Transcriptional regulator insig. 36 95
o Enterobacter sp. TBS_079 MPMX20_02999 HTH-type transcriptional regulator YhaJ insig. 36 95
  Enterobacter sp. TBS_079 MPMX20_04013 HTH-type transcriptional regulator YhaJ sig. 38 93
o Pectobacterium carotovorum WPP14 HER17_RS18770 LysR family transcriptional regulator insig. 37 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5181 LysR-family transcriptional regulator insig. 36 95
  Enterobacter asburiae PDN3 EX28DRAFT_3172 Transcriptional regulator strong 38 93
  Escherichia coli BL21 ECD_02974 LysR family putative transcriptional regulator insig. 38 93
  Escherichia fergusonii Becca EFB2_00708 HTH-type transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECOR27 NOLOHH_10230 yhaJ DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECOR38 HEPCGN_17285 yhaJ DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECRC100 OKFHMN_18450 yhaJ DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECRC101 MCAODC_08965 yhaJ DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECRC102 NIAGMN_16215 yhaJ DNA-binding transcriptional regulator YhaJ cofit 38 93
  Escherichia coli ECRC62 BNILDI_01295 yhaJ DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECRC98 JDDGAC_22085 yhaJ DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli ECRC99 KEDOAH_09695 yhaJ DNA-binding transcriptional regulator YhaJ no data 38 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00593 HTH-type transcriptional regulator YhaJ insig. 38 93
  Escherichia coli Nissle 1917 ECOLIN_RS17890 DNA-binding transcriptional regulator YhaJ insig. 38 93
  Escherichia coli BW25113 b3105 yhaJ predicted DNA-binding transcriptional regulator (NCBI) insig. 38 93
  Enterobacter asburiae PDN3 EX28DRAFT_1656 Transcriptional regulator insig. 37 91
  Klebsiella michiganensis M5al BWI76_RS16515 LysR family transcriptional regulator insig. 38 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3201 LysR-family transcriptional regulator YhaJ insig. 37 93
  Enterobacter sp. TBS_079 MPMX20_01977 putative HTH-type transcriptional regulator YahB strong 37 91
  Escherichia fergusonii Becca EFB2_02333 putative HTH-type transcriptional regulator YahB insig. 37 91
  Escherichia coli ECOR27 NOLOHH_17900 punR DNA-binding transcriptional activator PunR insig. 37 91
  Escherichia coli ECRC100 OKFHMN_27380 punR DNA-binding transcriptional activator PunR cofit 37 91
  Escherichia coli ECRC101 MCAODC_18030 punR DNA-binding transcriptional activator PunR insig. 37 91
  Escherichia coli ECRC102 NIAGMN_00685 punR DNA-binding transcriptional activator PunR cofit 37 91
  Escherichia coli ECRC62 BNILDI_16690 punR DNA-binding transcriptional activator PunR cofit 37 91
  Escherichia coli ECRC98 JDDGAC_01970 punR DNA-binding transcriptional activator PunR insig. 37 91
  Escherichia coli ECRC99 KEDOAH_00730 punR DNA-binding transcriptional activator PunR no data 37 91
  Escherichia coli Nissle 1917 ECOLIN_RS09250 DNA-binding transcriptional activator PunR insig. 37 91
  Escherichia coli BW25113 b1659 ydhB predicted DNA-binding transcriptional regulator (NCBI) sig. 37 91
  Klebsiella pneumoniae MKP103 KDGMDA_23475 DNA-binding transcriptional activator PunR insig. 37 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3617 LysR-family transcriptional regulator YdhB insig. 36 91
  Escherichia coli BL21 ECD_01630 LysR family putative transcriptional regulator insig. 37 91
  Escherichia coli ECOR38 HEPCGN_05765 punR DNA-binding transcriptional activator PunR sig. 37 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02065 putative HTH-type transcriptional regulator YahB insig. 37 91
o Vibrio cholerae E7946 ATCC 55056 CSW01_17100 LysR family transcriptional regulator insig. 35 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_13980 LysR family transcriptional regulator cofit 34 93
  Klebsiella michiganensis M5al BWI76_RS24790 LysR family transcriptional regulator insig. 36 93
o Dickeya dianthicola ME23 DZA65_RS02905 LysR family transcriptional regulator insig. 36 93
o Dickeya dadantii 3937 DDA3937_RS02775 LysR family transcriptional regulator insig. 35 93
  Escherichia fergusonii Becca EFB2_04800 putative HTH-type transcriptional regulator YahB insig. 34 98
o Dickeya dianthicola 67-19 HGI48_RS02750 LysR family transcriptional regulator insig. 35 93
  Escherichia coli Nissle 1917 ECOLIN_RS22025 LysR substrate-binding domain-containing protein insig. 34 94
  Klebsiella michiganensis M5al BWI76_RS18910 LysR family transcriptional regulator insig. 35 95
  Escherichia coli BL21 ECD_03709 hypothetical protein insig. 34 94