Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF442 | | Galactose-binding protein regulator | insig. | 100 | 100 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2287 | | Transcriptional regulator, LysR family | insig. | 49 | 99 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS10750 | | LysR family transcriptional regulator | insig. | 34 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34435 | | LysR substrate-binding domain-containing protein | insig. | 35 | 98 |
o | Dickeya dianthicola ME23 | DZA65_RS19900 | | LysR family transcriptional regulator | insig. | 33 | 95 |
o | Dickeya dianthicola 67-19 | HGI48_RS18765 | | LysR family transcriptional regulator | insig. | 33 | 95 |
o | Dickeya dadantii 3937 | DDA3937_RS18780 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| Variovorax sp. SCN45 | GFF5083 | | Transcriptional regulator, LysR family | no data | 35 | 96 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03658 | | transcriptional regulator, LysR family | insig. | 33 | 96 |
| Pantoea sp. MT58 | IAI47_17625 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03157 | | transcriptional regulator, LysR family | insig. | 32 | 99 |
| Paraburkholderia graminis OAS925 | ABIE53_004599 | | LysR family transcriptional regulator of abg operon | sig. | 33 | 96 |
| Paraburkholderia graminis OAS925 | ABIE53_004139 | | LysR family transcriptional regulator of abg operon | insig. | 33 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS23575 | | LysR substrate-binding domain-containing protein | insig. | 32 | 98 |
| Burkholderia phytofirmans PsJN | BPHYT_RS35095 | | LysR family transcriptional regulator | no data | 31 | 96 |
| Variovorax sp. SCN45 | GFF7053 | | Transcriptional regulator, LysR family | insig. | 34 | 99 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3314 | | Transcriptional regulator | insig. | 31 | 98 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07495 | | LysR family transcriptional regulator | no data | 31 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS16715 | | LysR substrate-binding domain-containing protein | insig. | 31 | 96 |
| Serratia liquefaciens MT49 | IAI46_21600 | | LysR family transcriptional regulator | insig. | 30 | 95 |
| Pseudomonas sp. S08-1 | OH686_10420 | | hypothetical protein | insig. | 33 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_001375 | | LysR family transcriptional regulator of abg operon | insig. | 32 | 99 |
| Paraburkholderia graminis OAS925 | ABIE53_001720 | | LysR family transcriptional regulator of abg operon | insig. | 32 | 98 |
| Escherichia coli ECOR27 | NOLOHH_19915 | lysR | LysR family transcriptional regulator | cofit | 29 | 95 |
| Escherichia coli ECRC62 | BNILDI_18065 | lysR | LysR family transcriptional regulator | insig. | 29 | 95 |
| Enterobacter sp. TBS_079 | MPMX20_02040 | | HTH-type transcriptional regulator TsaR | insig. | 27 | 96 |
| Rahnella sp. WP5 | EX31_RS23920 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| Escherichia coli BL21 | ECD_01316 | | putative DNA-binding transcriptional regulator of abgABT operon | no data | 28 | 95 |
| Escherichia coli ECRC101 | OKFHMN_02200 | abgR | LysR family transcriptional regulator | insig. | 28 | 95 |
| Escherichia coli ECRC101 | MCAODC_16055 | abgR | LysR family transcriptional regulator | insig. | 28 | 95 |
| Escherichia coli ECRC102 | NIAGMN_26370 | abgR | LysR family transcriptional regulator | insig. | 28 | 95 |
| Escherichia coli ECRC98 | JDDGAC_04760 | abgR | LysR family transcriptional regulator | no data | 28 | 95 |
| Escherichia coli ECRC99 | KEDOAH_26555 | abgR | LysR family transcriptional regulator | no data | 28 | 95 |
| Klebsiella michiganensis M5al | BWI76_RS16160 | | LysR family transcriptional regulator | strong | 30 | 93 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1535 | | Transcriptional regulator | insig. | 27 | 96 |
| Escherichia coli BW25113 | b1339 | abgR | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 28 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_29025 | | LysR family transcriptional regulator | insig. | 32 | 100 |
| Variovorax sp. OAS795 | ABID97_RS25785 | | LysR substrate-binding domain-containing protein | no data | 32 | 93 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02343 | | HTH-type transcriptional regulator TsaR | insig. | 28 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_28155 | | LysR family transcriptional regulator | insig. | 30 | 99 |
| Serratia liquefaciens MT49 | IAI46_17100 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29440 | | LysR family transcriptional regulator | no data | 34 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS19830 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF140 | | Transcriptional regulator | no data | 31 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS27940 | | LysR family transcriptional regulator | insig. | 32 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS34450 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS12390 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| Pseudomonas stutzeri RCH2 | Psest_1586 | | Transcriptional regulator | insig. | 31 | 88 |
o | Pseudomonas putida KT2440 | PP_2701 | | Transcriptional regulator, LysR family | strong | 30 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS34605 | | hypothetical protein | insig. | 29 | 95 |
| Rhizobium sp. OAE497 | ABIE40_RS26220 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS31235 | | transcriptional regulator | insig. | 26 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02334 | | DNA-binding transcriptional regulator, LysR family | insig. | 28 | 98 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1529 | | Putative transcriptional regulator | insig. | 27 | 93 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3111 | | transcriptional regulator, LysR family | insig. | 27 | 98 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3111 | | transcriptional regulator, LysR family | insig. | 27 | 98 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3446 | | Cys regulon transcriptional activator CysB | insig. | 30 | 97 |
| Escherichia fergusonii Becca | EFB2_00696 | | HTH-type transcriptional regulator TsaR | insig. | 26 | 89 |
| Escherichia coli Nissle 1917 | ECOLIN_RS17945 | | transcriptional regulator TdcA | insig. | 26 | 89 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_04260 | | LysR family transcriptional regulator | insig. | 35 | 48 |
| Escherichia coli BL21 | ECD_02985 | | tdc operon transcriptional activator | cofit | 26 | 89 |
| Escherichia coli ECOR27 | NOLOHH_10175 | tdcA | transcriptional regulator TdcA | cofit | 26 | 89 |
| Escherichia coli ECOR38 | HEPCGN_17230 | tdcA | transcriptional regulator TdcA | cofit | 26 | 89 |
| Escherichia coli ECRC101 | OKFHMN_18395 | tdcA | transcriptional regulator TdcA | insig. | 26 | 89 |
| Escherichia coli ECRC102 | NIAGMN_16160 | tdcA | transcriptional regulator TdcA | insig. | 26 | 89 |
| Escherichia coli ECRC62 | BNILDI_01350 | tdcA | transcriptional regulator TdcA | insig. | 26 | 89 |
| Escherichia coli ECRC98 | JDDGAC_22030 | tdcA | transcriptional regulator TdcA | no data | 26 | 89 |
| Escherichia coli ECRC99 | KEDOAH_09750 | tdcA | transcriptional regulator TdcA | no data | 26 | 89 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00582 | | HTH-type transcriptional regulator TsaR | insig. | 26 | 89 |
| Escherichia coli BW25113 | b3118 | tdcA | DNA-binding transcriptional activator (NCBI) | insig. | 26 | 89 |
| Pseudomonas sp. RS175 | PFR28_00349 | | HTH-type transcriptional regulator GltC | insig. | 35 | 48 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS05215 | | LysR family transcriptional regulator | strong | 27 | 96 |
| Escherichia coli ECRC101 | MCAODC_08910 | tdcA | transcriptional regulator TdcA | insig. | 26 | 89 |
| Enterobacter sp. TBS_079 | MPMX20_04022 | | HTH-type transcriptional regulator TsaR | cofit | 25 | 89 |
| Paraburkholderia graminis OAS925 | ABIE53_000319 | | DNA-binding transcriptional LysR family regulator | sig. | 27 | 98 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3077.1 | | Galactose-binding protein regulator | insig. | 28 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_06285 | | LysR family transcriptional regulator | insig. | 34 | 48 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01661 | | DNA-binding transcriptional regulator, LysR family | insig. | 34 | 62 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3125 | | Transcriptional regulators, LysR family | insig. | 34 | 48 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS32975 | | LysR family transcriptional regulator | insig. | 28 | 88 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS19325 | | LysR family transcriptional regulator | strong | 28 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26875 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2139 | | transcriptional regulator, LysR family | insig. | 30 | 100 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3179 | | Transcriptional regulator | insig. | 25 | 89 |
| Marinobacter adhaerens HP15 | HP15_4145 | | transcriptional regulator, LysR family | insig. | 31 | 70 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4759 | | Transcriptional regulators, LysR family | insig. | 34 | 48 |
| Shewanella oneidensis MR-1 | SO1916 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 34 | 61 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_401 | | Cyn operon transcriptional activator | insig. | 31 | 96 |
| Pantoea sp. MT58 | IAI47_10140 | | LysR family transcriptional regulator | insig. | 30 | 62 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_30245 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1911 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 98 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS08345 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| Agrobacterium fabrum C58 | Atu2350 | | transcriptional regulator, LysR family | sig. | 28 | 83 |
| Shewanella sp. ANA-3 | Shewana3_1691 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 60 |
| Pseudomonas simiae WCS417 | PS417_05950 | | LysR family transcriptional regulator | insig. | 32 | 48 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS33430 | | LysR family transcriptional regulator | insig. | 31 | 81 |
| Pseudomonas sp. S08-1 | OH686_06895 | | Transcriptional regulator, LysR family | insig. | 32 | 48 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3165 | | transcriptional regulator, LysR family | insig. | 31 | 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3165 | | transcriptional regulator, LysR family | insig. | 31 | 62 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS11270 | | LysR family transcriptional regulator | insig. | 35 | 48 |