Homologs of GFF2319 from Sphingobium sp. HT1-2

DNA-directed RNA polymerase specialized sigma subunit, sigma24-like
SEED: DNA-directed RNA polymerase specialized sigma subunit, sigma24-like

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2319 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3490 Response regulator receiver domain/Sigma-70, region 4 strong 77 100
o Bosea sp. OAE506 ABIE41_RS04085 response regulator sig. 57 98
o Caulobacter crescentus NA1000 CCNA_03591 anti-anti sigma factor/receiver protein PhyR strong 61 97
o Caulobacter crescentus NA1000 Δfur CCNA_03591 anti-anti sigma factor/receiver protein PhyR cofit 61 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14785 response regulator strong 59 97
o Sinorhizobium meliloti 1021 SMc01504 two-component response regulator strong 54 100
  Sinorhizobium meliloti 1021 SMc00794 two-component response regulator strong 55 98
o Rhizobium sp. OAE497 ABIE40_RS14460 response regulator strong 53 100
o Rhodopseudomonas palustris CGA009 TX73_021890 response regulator cofit 52 99
o Phaeobacter inhibens DSM 17395 PGA1_c27080 response regulator receiver protein insig. 53 97
o Agrobacterium fabrum C58 Atu4162 two-component response regulator strong 52 99
o Rhodospirillum rubrum S1H Rru_A3285 Response regulator receiver domain protein (CheY) (NCBI) insig. 51 98
o Dinoroseobacter shibae DFL-12 Dshi_3837 response regulator receiver and SARP domain protein (RefSeq) insig. 53 97
o Xanthobacter sp. DMC5 GFF2318 Phyllosphere-induced regulator PhyR insig. 54 97
o Azospirillum sp. SherDot2 MPMX19_04424 Phyllosphere-induced regulator PhyR insig. 38 94
o Azospirillum brasilense Sp245 AZOBR_RS21690 regulator insig. 37 95
  Azospirillum brasilense Sp245 AZOBR_RS06745 regulator insig. 33 96
  Azospirillum sp. SherDot2 MPMX19_01090 Phyllosphere-induced regulator PhyR insig. 33 97
  Azospirillum sp. SherDot2 MPMX19_02869 Sensor histidine kinase TmoS insig. 36 44
  Desulfovibrio vulgaris Miyazaki F DvMF_1460 putative PAS/PAC sensor protein (RefSeq) cofit 39 44
  Desulfovibrio vulgaris Miyazaki F DvMF_2677 response regulator receiver sensor hybrid histidine kinase (RefSeq) sig. 38 46
  Rhizobium sp. OAE497 ABIE40_RS22785 response regulator insig. 39 43
  Rhizobium sp. OAE497 ABIE40_RS27485 response regulator insig. 40 43
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19190 DNA-binding response regulator insig. 35 45
  Cellulophaga baltica 18 M666_RS13715 response regulator strong 32 43
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0505 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain insig. 34 45
  Synechocystis sp000284455 PCC 6803 SGL_RS06080 response regulator transcription factor insig. 32 42
  Sphingobium sp. HT1-2 GFF5152 hypothetical protein cofit 42 38
  Azospirillum sp. SherDot2 MPMX19_06040 Phyllosphere-induced regulator PhyR insig. 37 43
  Azospirillum brasilense Sp245 AZOBR_RS25995 regulator strong 36 42
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00670 response regulator no data 34 44
  Agrobacterium fabrum C58 Atu5378 two component response regulator no data 41 30
  Sphingobium sp. HT1-2 GFF4974 hypothetical protein cofit 39 38
  Desulfovibrio vulgaris Hildenborough JW710 DVU0681 sensor histidine kinase/response regulator (TIGR) strong 32 44
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1141 Response regulator of the LytR/AlgR family no data 31 44
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01555 response regulator insig. 36 41
  Bosea sp. OAE506 ABIE41_RS24110 response regulator insig. 49 32
  Bosea sp. OAE506 ABIE41_RS00485 response regulator insig. 35 41
  Azospirillum brasilense Sp245 AZOBR_RS07605 regulator strong 32 43
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1054 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 44
  Rhizobium sp. OAE497 ABIE40_RS30650 response regulator insig. 40 32
  Sinorhizobium meliloti 1021 SMa0114 two-component response regulator cofit 37 44
  Desulfovibrio vulgaris Miyazaki F DvMF_1374 putative PAS/PAC sensor protein (RefSeq) sig. 41 31
  Cellulophaga baltica 18 M666_RS12540 sigma 54-interacting response regulator insig. 33 43
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2154 Response regulator of the LytR/AlgR family insig. 30 44
  Rhizobium sp. OAE497 ABIE40_RS24250 response regulator insig. 33 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU0933 response regulator (TIGR) insig. 36 30
  Caulobacter crescentus NA1000 CCNA_00286 two-component receiver domain protein LovR cofit 30 46
  Caulobacter crescentus NA1000 Δfur CCNA_00286 two-component receiver domain protein LovR cofit 30 46
  Rhizobium sp. OAE497 ABIE40_RS20270 response regulator insig. 29 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU2933 response regulator/sensory box/HDIG domain protein (TIGR) strong 31 44
  Caulobacter crescentus NA1000 CCNA_02967 PAS-family sensor histidine kinase cofit 30 47
  Caulobacter crescentus NA1000 Δfur CCNA_02967 PAS-family sensor histidine kinase insig. 30 47
  Sphingobium sp. HT1-2 GFF650 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 35 43
  Rhizobium sp. OAE497 ABIE40_RS27445 response regulator insig. 34 42
  Mycobacterium tuberculosis H37Rv Rv1626 Probable two-component system transcriptional regulator strong 33 46
  Rhizobium sp. OAE497 ABIE40_RS26630 response regulator insig. 32 43
  Azospirillum sp. SherDot2 MPMX19_04973 hypothetical protein insig. 38 31
  Rhodopseudomonas palustris CGA009 TX73_005095 HWE histidine kinase domain-containing protein insig. 27 44
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2971 Response regulator receiver domain no data 34 44
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3803 Response regulator of the LytR/AlgR family strong 25 47
  Azospirillum brasilense Sp245 AZOBR_RS16625 regulator insig. 30 32
  Azospirillum sp. SherDot2 MPMX19_01131 hypothetical protein no data 30 43
  Azospirillum brasilense Sp245 AZOBR_RS21875 histidine kinase sig. 32 42
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0013 Signal transduction histidine kinase no data 29 45
  Agrobacterium fabrum C58 Atu4671 response regulator insig. 32 43
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 31 51
  Pseudomonas sp. SVBP6 COO64_RS23795 PAS domain-containing hybrid sensor histidine kinase/response regulator insig. 29 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 36 25
  Azospirillum brasilense Sp245 AZOBR_RS32580 hypothetical protein insig. 32 38
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05610 DNA-binding response regulator insig. 32 46
  Marinobacter adhaerens HP15 HP15_1249 two-component system sensor protein insig. 35 30
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 28 52
  Castellaniella sp019104865 MT123 ABCV34_RS02930 response regulator insig. 34 43
  Paraburkholderia sabiae LMG 24235 QEN71_RS16465 hybrid sensor histidine kinase/response regulator cofit 30 45
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 36 24
  Sphingobium sp. HT1-2 GFF3119 putative sensory transduction regulatory protein cofit 34 43
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06585 response regulator no data 33 46
  Rhizobium sp. OAE497 ABIE40_RS27480 response regulator insig. 32 43
  Bifidobacterium breve UCC2003 BBR_RS14310 ANTAR domain-containing protein no data 29 47
  Azospirillum sp. SherDot2 MPMX19_04245 hypothetical protein insig. 28 31
  Azospirillum brasilense Sp245 AZOBR_RS30160 chemotaxis protein CheY insig. 32 41
  Rhizobium sp. OAE497 ABIE40_RS27375 response regulator insig. 34 30
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08595 response regulator insig. 29 51
  Acinetobacter baumannii LAC-4 RR41_RS17670 LytTR family DNA-binding domain-containing protein insig. 27 38
  Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 27 55
  Alteromonas macleodii MIT1002 MIT1002_00654 Signal transduction histidine-protein kinase BarA insig. 35 34
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19305 hybrid sensor histidine kinase/response regulator insig. 32 39
  Sphingobium sp. HT1-2 GFF2215 Two-component system sensor histidine kinase cofit 29 42
  Agrobacterium fabrum C58 Atu2165 bacteriophytochrome protein insig. 27 42
  Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 34 25
  Caulobacter crescentus NA1000 CCNA_02659 two-component receiver domain protein cofit 31 41
  Caulobacter crescentus NA1000 Δfur CCNA_02659 two-component receiver domain protein cofit 31 41
  Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 34 25
  Rhodospirillum rubrum S1H Rru_A2229 Response regulator receiver domain protein (CheY) (NCBI) no data 34 42
  Caulobacter crescentus NA1000 CCNA_03110 two-component receiver domain protein strong 32 41
  Caulobacter crescentus NA1000 Δfur CCNA_03110 two-component receiver domain protein cofit 32 41
  Sphingobium sp. HT1-2 GFF5140 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 31 47
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 27 52